BLASTX nr result

ID: Atractylodes21_contig00017850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017850
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37185.3| unnamed protein product [Vitis vinifera]              133   5e-29
ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik...   133   5e-29
ref|XP_002303113.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]   122   9e-26
ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative ...   121   2e-25

>emb|CBI37185.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  133 bits (334), Expect = 5e-29
 Identities = 63/103 (61%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3   LPHKSSSESKKRHLEGYSVSDRAKLAKT--GVVTSASSVTGTYQGTQNQLPAGYGVQPQS 176
           L H+S+SE KKRH E +  SD+AKLAK+  GV + A S+ G Y   QNQ  +GYG+QPQ+
Sbjct: 280 LHHRSTSELKKRHAEDFLASDKAKLAKSYSGVPSPAQSLMGAYPSAQNQWASGYGLQPQA 339

Query: 177 WPQATQTQGQQWPSGYTQQSVYGTYNAYGSSYAQPQAPTSVPQ 305
           WPQATQ QGQQW  GYTQQ+ Y  Y+ YGSSY  PQ PTSVPQ
Sbjct: 340 WPQATQAQGQQWNPGYTQQAAYNAYSGYGSSYTHPQIPTSVPQ 382


>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
          Length = 832

 Score =  133 bits (334), Expect = 5e-29
 Identities = 63/103 (61%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3   LPHKSSSESKKRHLEGYSVSDRAKLAKT--GVVTSASSVTGTYQGTQNQLPAGYGVQPQS 176
           L H+S+SE KKRH E +  SD+AKLAK+  GV + A S+ G Y   QNQ  +GYG+QPQ+
Sbjct: 680 LHHRSTSELKKRHAEDFLASDKAKLAKSYSGVPSPAQSLMGAYPSAQNQWASGYGLQPQA 739

Query: 177 WPQATQTQGQQWPSGYTQQSVYGTYNAYGSSYAQPQAPTSVPQ 305
           WPQATQ QGQQW  GYTQQ+ Y  Y+ YGSSY  PQ PTSVPQ
Sbjct: 740 WPQATQAQGQQWNPGYTQQAAYNAYSGYGSSYTHPQIPTSVPQ 782


>ref|XP_002303113.1| predicted protein [Populus trichocarpa] gi|222844839|gb|EEE82386.1|
            predicted protein [Populus trichocarpa]
          Length = 878

 Score =  127 bits (319), Expect = 3e-27
 Identities = 61/103 (59%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3    LPHKSSSESKKRHLEGYSVSDRAKLAKT--GVVTSASSVTGTYQGTQNQLPAGYGVQPQS 176
            LPH+S SE KKRH E Y  SD+AK+AK      + A S+ G Y   QNQ  AGYGVQPQ+
Sbjct: 727  LPHRSKSELKKRHAEDYLASDKAKMAKPYPDATSPAQSLMGAYASAQNQWTAGYGVQPQA 786

Query: 177  WPQATQTQGQQWPSGYTQQSVYGTYNAYGSSYAQPQAPTSVPQ 305
            WP ATQ Q QQW  GY QQ+ YG Y+ YG SY  PQAPTSV Q
Sbjct: 787  WPPATQVQTQQWAPGYNQQAAYGAYSGYGGSYPNPQAPTSVAQ 829


>emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]
          Length = 826

 Score =  122 bits (306), Expect = 9e-26
 Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = +3

Query: 30  KKRHLEGYSVSDRAKLAKT--GVVTSASSVTGTYQGTQNQLPAGYGVQPQSWPQATQTQG 203
           +KRH E +  SD+AKLAK+  GV + A S+ G Y   QNQ  +GYG+QPQ+WPQATQ QG
Sbjct: 683 EKRHAEDFLASDKAKLAKSYSGVPSPAQSLMGAYPSAQNQWASGYGLQPQAWPQATQAQG 742

Query: 204 QQWPSGYTQQSVYGTYNAYGSSYAQPQAPTSVPQ 305
           QQW  GYTQQ+ Y  Y+ YGSSY  PQ PTSVPQ
Sbjct: 743 QQWNPGYTQQAAYNAYSGYGSSYTHPQIPTSVPQ 776


>ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
           gi|223534107|gb|EEF35824.1| Pre-mRNA-processing protein
           prp39, putative [Ricinus communis]
          Length = 829

 Score =  121 bits (303), Expect = 2e-25
 Identities = 58/103 (56%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3   LPHKSSSESKKRHLEGYSVSDRAKLAKT--GVVTSASSVTGTYQGTQNQLPAGYGVQPQS 176
           LPH+S SE KKRH + Y  SD++K+AK      +   S+ G Y  TQNQ  AGYGVQPQ+
Sbjct: 678 LPHRSKSEFKKRHADDYLTSDKSKIAKAYGDAPSPVQSLMGAYPSTQNQWAAGYGVQPQA 737

Query: 177 WPQATQTQGQQWPSGYTQQSVYGTYNAYGSSYAQPQAPTSVPQ 305
           WP ATQ Q QQW  GY QQ+ Y TY +Y SSY  PQAPTS  Q
Sbjct: 738 WPPATQAQMQQWTPGYGQQAAYSTYGSYASSYTTPQAPTSAAQ 780


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