BLASTX nr result
ID: Atractylodes21_contig00017749
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00017749 (379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 47 2e-06 ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 47 3e-06 ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2... 42 3e-06 >ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max] Length = 919 Score = 46.6 bits (109), Expect(2) = 2e-06 Identities = 20/27 (74%), Positives = 23/27 (85%) Frame = -3 Query: 338 KVEMAQKDVPEAVFGGLVRKRDEEAEN 258 K+E+AQKDVP AVFGGL+RKRDE N Sbjct: 866 KIEIAQKDVPSAVFGGLIRKRDENENN 892 Score = 30.0 bits (66), Expect(2) = 2e-06 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = -2 Query: 252 AMKNGDGGSRLGALERIKQMRQ 187 A K+ D G RLGALER+K+++Q Sbjct: 897 AAKDKDNGIRLGALERMKRLKQ 918 >ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max] Length = 918 Score = 46.6 bits (109), Expect(2) = 3e-06 Identities = 20/27 (74%), Positives = 23/27 (85%) Frame = -3 Query: 338 KVEMAQKDVPEAVFGGLVRKRDEEAEN 258 K+E+AQKDVP AVFGGL+RKRDE N Sbjct: 865 KIEIAQKDVPSAVFGGLIRKRDENENN 891 Score = 29.3 bits (64), Expect(2) = 3e-06 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = -2 Query: 246 KNGDGGSRLGALERIKQMRQ 187 K+ D +RLGALERIK++RQ Sbjct: 898 KDKDNENRLGALERIKRLRQ 917 >ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1| predicted protein [Populus trichocarpa] Length = 908 Score = 42.0 bits (97), Expect(2) = 3e-06 Identities = 19/28 (67%), Positives = 23/28 (82%) Frame = -3 Query: 338 KVEMAQKDVPEAVFGGLVRKRDEEAEND 255 KVE+AQKDVP AVFGGL KR+E ++D Sbjct: 860 KVEIAQKDVPSAVFGGLAGKREEPEKDD 887 Score = 33.9 bits (76), Expect(2) = 3e-06 Identities = 14/18 (77%), Positives = 18/18 (100%) Frame = -2 Query: 237 DGGSRLGALERIKQMRQG 184 DGGSRLGALERIK++++G Sbjct: 890 DGGSRLGALERIKRLKRG 907