BLASTX nr result

ID: Atractylodes21_contig00017707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017707
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   268   1e-69
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   256   4e-66
ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol...   253   4e-65
ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatul...   247   2e-63
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   245   9e-63

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  268 bits (684), Expect = 1e-69
 Identities = 127/182 (69%), Positives = 146/182 (80%), Gaps = 4/182 (2%)
 Frame = -3

Query: 538 MAFQPSDRAGPXXXXXXXXGFQHMS----DTTLTKVFVGGLAWETQSETLRQYFEQFGEI 371
           MA+QP    GP        GFQ ++    DTT TKVFVGGLAWETQSET+R+YFEQFGEI
Sbjct: 1   MAYQPIP--GPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 58

Query: 370 IEAVVITDKNTGRSKGYGFVTFRDPQSARRACVDPAPVIDGRRANCNLASFGRPQHALPF 191
           +EAVVITDKNTGRSKGYGFVTFRDP+SARRAC+DPAP+IDGRRANCNLAS GRP+ ++ +
Sbjct: 59  LEAVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSY 118

Query: 190 GSIRSPTPFAGGMPAVRGPYFGSYGYQQPVPYSYQAGLTYPSYSYATYGPEYFYPQGIYN 11
           G +R  TP+ G +PA RG Y G++GYQQPV YSYQ G  YPSY YA YGPEY YPQG+YN
Sbjct: 119 GRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYN 178

Query: 10  PY 5
           PY
Sbjct: 179 PY 180


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  256 bits (654), Expect = 4e-66
 Identities = 122/183 (66%), Positives = 141/183 (77%), Gaps = 4/183 (2%)
 Frame = -3

Query: 538 MAFQPSDRAGPXXXXXXXXGFQHMS----DTTLTKVFVGGLAWETQSETLRQYFEQFGEI 371
           MA+Q     GP        GFQ ++    DTT TKVFVGGLAWETQSET+R+YF+QFGEI
Sbjct: 1   MAYQAMQ--GPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEI 58

Query: 370 IEAVVITDKNTGRSKGYGFVTFRDPQSARRACVDPAPVIDGRRANCNLASFGRPQHALPF 191
           +EAVVITDKNTGRSKGYGFVTFRDP++ARRAC DP+PVIDGRRANCNLAS GRP+  LP+
Sbjct: 59  LEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPY 118

Query: 190 GSIRSPTPFAGGMPAVRGPYFGSYGYQQPVPYSYQAGLTYPSYSYATYGPEYFYPQGIYN 11
           G IR  +P+ G +   RG Y G +GYQQPV YSYQ GL YP Y Y +YGPEY YPQ +YN
Sbjct: 119 GRIRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYN 178

Query: 10  PYV 2
           PY+
Sbjct: 179 PYM 181


>ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus] gi|449531145|ref|XP_004172548.1| PREDICTED:
           RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus]
          Length = 286

 Score =  253 bits (645), Expect = 4e-65
 Identities = 117/156 (75%), Positives = 131/156 (83%), Gaps = 2/156 (1%)
 Frame = -3

Query: 463 DTTLTKVFVGGLAWETQSETLRQYFEQFGEIIEAVVITDKNTGRSKGYGFVTFRDPQSAR 284
           DTT TKVFVGGLAWETQSET+R+YFEQFGEI+EAVVITDKNTGRSKGYGFVTFRDP+SAR
Sbjct: 28  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87

Query: 283 RACVDPAPVIDGRRANCNLASFGRPQHALPFGS--IRSPTPFAGGMPAVRGPYFGSYGYQ 110
           RAC DP P+IDGRRANCNLAS GRP+  L +G+  +R P  + GGM   RG Y G++GYQ
Sbjct: 88  RACADPTPIIDGRRANCNLASLGRPRPPLSYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQ 147

Query: 109 QPVPYSYQAGLTYPSYSYATYGPEYFYPQGIYNPYV 2
           QPV Y+YQ GL YP Y YATYGPEY YPQG YNP+V
Sbjct: 148 QPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFV 183


>ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula]
           gi|355492925|gb|AES74128.1| RNA-binding protein 24-B
           [Medicago truncatula]
          Length = 371

 Score =  247 bits (631), Expect = 2e-63
 Identities = 119/183 (65%), Positives = 139/183 (75%), Gaps = 5/183 (2%)
 Frame = -3

Query: 538 MAFQPSDRAGPXXXXXXXXGFQHMS----DTTLTKVFVGGLAWETQSETLRQYFEQFGEI 371
           MA+Q     GP        GFQ ++    DTT TKVFVGGLAWETQSET+R+YFEQFG+I
Sbjct: 1   MAYQ-----GPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDI 55

Query: 370 IEAVVITDKNTGRSKGYGFVTFRDPQSARRACVDPAPVIDGRRANCNLASFGRPQ-HALP 194
           +EAVVITDKNTGRSKGYGFVTFRDP++ARRAC DP+PVIDGRRANCNLAS GRP+   + 
Sbjct: 56  LEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASHGRPRGPPIS 115

Query: 193 FGSIRSPTPFAGGMPAVRGPYFGSYGYQQPVPYSYQAGLTYPSYSYATYGPEYFYPQGIY 14
           +G +R  +P+ G +   RG Y G YGYQQP+ Y YQ G+ YP Y Y TYGPEY YPQG+Y
Sbjct: 116 YGRVRPASPYVGSLQPARGAYVGGYGYQQPLSYGYQQGMVYPPYGYTTYGPEYVYPQGMY 175

Query: 13  NPY 5
           NPY
Sbjct: 176 NPY 178


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score =  245 bits (625), Expect = 9e-63
 Identities = 115/162 (70%), Positives = 129/162 (79%), Gaps = 8/162 (4%)
 Frame = -3

Query: 463 DTTLTKVFVGGLAWETQSETLRQYFEQFGEIIEAVVITDKNTGRSKGYGFVTFRDPQSAR 284
           DTT TKVFVGGLAWETQSET+R+YF+QFGEI+EAVVITDKNTGRSKGYGFVTFRDP++AR
Sbjct: 28  DTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAAR 87

Query: 283 RACVDPAPVIDGRRANCNLASFGRPQHALPFG-------SIRSPTPFAGGMPAVRGPYFG 125
           RAC DP PVIDGRRANCNLAS GRP+  LP+G        IR  +P+ G +   RG Y G
Sbjct: 88  RACADPTPVIDGRRANCNLASLGRPRPPLPYGIVLCLIRRIRPASPYVGSLQPARGAYVG 147

Query: 124 SYGY-QQPVPYSYQAGLTYPSYSYATYGPEYFYPQGIYNPYV 2
            +GY QQPV YSYQ GL YP Y Y TYGPEY YPQ +YNPY+
Sbjct: 148 GFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIYPQSLYNPYM 189


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