BLASTX nr result

ID: Atractylodes21_contig00017706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017706
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524885.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   170   1e-40
gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [...   169   3e-40
gb|AAG50585.1|AC079280_16 RNA helicase, putative, 5' partial [Ar...   169   3e-40
ref|NP_564296.1| helicase associated domain-containing protein [...   169   3e-40
ref|XP_004143044.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   168   4e-40

>ref|XP_003524885.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Glycine max]
          Length = 696

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/90 (90%), Positives = 87/90 (96%)
 Frame = -3

Query: 272 DDIEKLVSKLEEKIGSLDVGSCMDAIVLPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIA 93
           DDIEKLVSKLE+K+ +L+ GSCMDAI+LPLHGSLPPE+QVRVFSPPPPNCRR IVATNIA
Sbjct: 221 DDIEKLVSKLEDKVRALEEGSCMDAIILPLHGSLPPELQVRVFSPPPPNCRRIIVATNIA 280

Query: 92  ETSLTVDGVVYVIDSGYVKQRQYNPSSGMY 3
           ETSLTVDGVVYVIDSGYVKQRQYNPSSGMY
Sbjct: 281 ETSLTVDGVVYVIDSGYVKQRQYNPSSGMY 310


>gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [Arabidopsis thaliana]
          Length = 708

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/90 (90%), Positives = 86/90 (95%)
 Frame = -3

Query: 272 DDIEKLVSKLEEKIGSLDVGSCMDAIVLPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIA 93
           DDIEKLVS+LEEK+ SL  GSCMDAI+ PLHGSLPPEMQVRVFSPPPPNCRRFIV+TNIA
Sbjct: 224 DDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIA 283

Query: 92  ETSLTVDGVVYVIDSGYVKQRQYNPSSGMY 3
           ETSLTVDGVVYVIDSGYVKQRQYNPSSGM+
Sbjct: 284 ETSLTVDGVVYVIDSGYVKQRQYNPSSGMF 313


>gb|AAG50585.1|AC079280_16 RNA helicase, putative, 5' partial [Arabidopsis thaliana]
          Length = 490

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/90 (90%), Positives = 86/90 (95%)
 Frame = -3

Query: 272 DDIEKLVSKLEEKIGSLDVGSCMDAIVLPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIA 93
           DDIEKLVS+LEEK+ SL  GSCMDAI+ PLHGSLPPEMQVRVFSPPPPNCRRFIV+TNIA
Sbjct: 23  DDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIA 82

Query: 92  ETSLTVDGVVYVIDSGYVKQRQYNPSSGMY 3
           ETSLTVDGVVYVIDSGYVKQRQYNPSSGM+
Sbjct: 83  ETSLTVDGVVYVIDSGYVKQRQYNPSSGMF 112


>ref|NP_564296.1| helicase associated domain-containing protein [Arabidopsis
           thaliana] gi|15451224|gb|AAK96883.1| ATP-dependent RNA
           helicase, putative [Arabidopsis thaliana]
           gi|22136080|gb|AAM91118.1| ATP-dependent RNA helicase,
           putative [Arabidopsis thaliana]
           gi|332192768|gb|AEE30889.1| helicase associated
           domain-containing protein [Arabidopsis thaliana]
          Length = 700

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/90 (90%), Positives = 86/90 (95%)
 Frame = -3

Query: 272 DDIEKLVSKLEEKIGSLDVGSCMDAIVLPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIA 93
           DDIEKLVS+LEEK+ SL  GSCMDAI+ PLHGSLPPEMQVRVFSPPPPNCRRFIV+TNIA
Sbjct: 224 DDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIA 283

Query: 92  ETSLTVDGVVYVIDSGYVKQRQYNPSSGMY 3
           ETSLTVDGVVYVIDSGYVKQRQYNPSSGM+
Sbjct: 284 ETSLTVDGVVYVIDSGYVKQRQYNPSSGMF 313


>ref|XP_004143044.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
           gi|449494554|ref|XP_004159579.1| PREDICTED:
           ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
          Length = 702

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/90 (90%), Positives = 86/90 (95%)
 Frame = -3

Query: 272 DDIEKLVSKLEEKIGSLDVGSCMDAIVLPLHGSLPPEMQVRVFSPPPPNCRRFIVATNIA 93
           DDIEKLVSKLEEK+ SL+ GSCMDAI+LPLHGSLPPE+QVRVFS PPPNCRRFI ATNIA
Sbjct: 224 DDIEKLVSKLEEKVYSLEEGSCMDAIILPLHGSLPPELQVRVFSRPPPNCRRFIAATNIA 283

Query: 92  ETSLTVDGVVYVIDSGYVKQRQYNPSSGMY 3
           ETSLTVDGVVYVIDSGYVKQRQYNPS+GMY
Sbjct: 284 ETSLTVDGVVYVIDSGYVKQRQYNPSTGMY 313


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