BLASTX nr result

ID: Atractylodes21_contig00017605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017605
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007025921.1| cytochrome b6 [Vaccinium macrocarpon] gi|374...   417   e-114
ref|YP_538966.1| cytochrome b6 [Gossypium hirsutum] gi|372291033...   417   e-114
gb|ADZ74678.1| cytochrome b6 [Gossypium stocksii]                     417   e-114
ref|YP_004286034.1| cytochrome b6 [Gossypium thurberi] gi|290775...   417   e-114
gb|ADZ74591.1| cytochrome b6 [Gossypium longicalyx]                   414   e-113

>ref|YP_007025921.1| cytochrome b6 [Vaccinium macrocarpon] gi|374093729|gb|AEY84165.1|
           cytochrome b6 (chloroplast) [Vaccinium macrocarpon]
           gi|385198157|gb|AFI44075.1| cytochrome b6 [Vaccinium
           macrocarpon]
          Length = 226

 Score =  417 bits (1073), Expect = e-114
 Identities = 208/224 (92%), Positives = 209/224 (93%)
 Frame = +1

Query: 1   GSRRGDRTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATG 180
           GSRRG  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATG
Sbjct: 3   GSRRGSLTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATG 62

Query: 181 FAMTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFK 360
           FAMTFYYRPTVT+AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFK
Sbjct: 63  FAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFK 122

Query: 361 KPRELTWXXXXXXXXXXASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRG 540
           KPRELTW          ASFGVTGYSLP DQIGYWAVKIVTGVPEAIP IGSPLVELLRG
Sbjct: 123 KPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPGIGSPLVELLRG 182

Query: 541 SASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 672
           SASVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRKQGISGPL
Sbjct: 183 SASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 226


>ref|YP_538966.1| cytochrome b6 [Gossypium hirsutum] gi|372291033|ref|YP_005087819.1|
           cytochrome b6 (chloroplast) [Gossypium darwinii]
           gi|85687445|gb|ABC73657.1| cytochrome b6 [Gossypium
           hirsutum] gi|318084401|gb|ADV38876.1| cytochrome b6
           (chloroplast) [Gossypium darwinii]
          Length = 235

 Score =  417 bits (1071), Expect = e-114
 Identities = 206/217 (94%), Positives = 207/217 (95%)
 Frame = +1

Query: 22  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 201
           TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY
Sbjct: 19  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 78

Query: 202 RPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 381
           RPTVT+AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW
Sbjct: 79  RPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 138

Query: 382 XXXXXXXXXXASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 561
                     ASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS
Sbjct: 139 VTGVVLGVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 198

Query: 562 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 672
           TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct: 199 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 235


>gb|ADZ74678.1| cytochrome b6 [Gossypium stocksii]
          Length = 234

 Score =  417 bits (1071), Expect = e-114
 Identities = 206/217 (94%), Positives = 207/217 (95%)
 Frame = +1

Query: 22  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 201
           TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY
Sbjct: 18  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 77

Query: 202 RPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 381
           RPTVT+AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW
Sbjct: 78  RPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 137

Query: 382 XXXXXXXXXXASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 561
                     ASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS
Sbjct: 138 VTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 197

Query: 562 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 672
           TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct: 198 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 234


>ref|YP_004286034.1| cytochrome b6 [Gossypium thurberi] gi|290775822|gb|ADD62318.1|
           cytochrome b6 [Gossypium thurberi]
           gi|326457098|gb|ADZ74362.1| cytochrome b6 [Gossypium
           anomalum] gi|326457187|gb|ADZ74450.1| cytochrome b6
           [Gossypium bickii] gi|326457506|gb|ADZ74765.1|
           cytochrome b6 [Gossypium sturtianum]
          Length = 234

 Score =  417 bits (1071), Expect = e-114
 Identities = 206/217 (94%), Positives = 207/217 (95%)
 Frame = +1

Query: 22  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 201
           TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY
Sbjct: 18  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 77

Query: 202 RPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 381
           RPTVT+AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW
Sbjct: 78  RPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 137

Query: 382 XXXXXXXXXXASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 561
                     ASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS
Sbjct: 138 VTGVVLGVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 197

Query: 562 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 672
           TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct: 198 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 234


>gb|ADZ74591.1| cytochrome b6 [Gossypium longicalyx]
          Length = 234

 Score =  414 bits (1065), Expect = e-113
 Identities = 205/217 (94%), Positives = 206/217 (94%)
 Frame = +1

Query: 22  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 201
           TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY
Sbjct: 18  TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 77

Query: 202 RPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 381
           RPTVT+AF SVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW
Sbjct: 78  RPTVTEAFDSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 137

Query: 382 XXXXXXXXXXASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 561
                     ASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS
Sbjct: 138 VTGVVLGVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 197

Query: 562 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 672
           TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
Sbjct: 198 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 234


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