BLASTX nr result

ID: Atractylodes21_contig00017578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017578
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21359.3| unnamed protein product [Vitis vinifera]              475   e-132
ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h...   475   e-132
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]   475   e-132
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h...   462   e-128
ref|XP_002511197.1| brg-1 associated factor, putative [Ricinus c...   459   e-127

>emb|CBI21359.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score =  475 bits (1223), Expect = e-132
 Identities = 226/302 (74%), Positives = 258/302 (85%)
 Frame = -1

Query: 1028 GRLLENGTDSDATATLQRQNSANPKFSSFFKKITIYLDQSLYPDNHVILWESSRSLALNE 849
            GR+LE G D D  A L + N + PKFSSFFK++TI LDQ LYPDN +I+WE++RS A +E
Sbjct: 176  GRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPAPHE 235

Query: 848  GFEVKRNGDKEFTAIVRLEMNYMPEKFKLSPALSDVLGIEVETRPRIIAAIWQYVKTKKL 669
            GFEVKR GDKEFT  +RLEMNY+PEKFKLS AL +VLGIEV+TRPRIIAAIW YVK +KL
Sbjct: 236  GFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKL 295

Query: 668  QIPTDTSFFTCDPPLRKLFGEDKVKFVMVSQKISQHLTPPQPIHLEHRIKISGDCPVGNT 489
            Q P D SFF CDPPL+K+FGEDK+KF MVSQKISQHL+PPQPIHLEH+IK+SG+CP GN 
Sbjct: 296  QNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPAGNA 355

Query: 488  CYDVLVDVPFSLDKDMSNFLENLEKHREIDACDEAICSAIKKIHEHRRRRAFFLGFCQSP 309
            CYDVLVDVPF + K++S  L N EK++EIDACDEAICSAI+KIHEHRRRRAFFLGF QSP
Sbjct: 356  CYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFSQSP 415

Query: 308  SEFINAFISSQSKDLKTAAGDATRNAEKEHRSEFYNQPWVEDAVIRYLNRKPTAGSDAPG 129
             EFIN  I SQSKDLK  AG+A+RNAEKE RS+F+NQPWVEDAVIRYLNRKP AGSDAPG
Sbjct: 416  VEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDAPG 475

Query: 128  ST 123
            ST
Sbjct: 476  ST 477


>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 548

 Score =  475 bits (1223), Expect = e-132
 Identities = 226/302 (74%), Positives = 258/302 (85%)
 Frame = -1

Query: 1028 GRLLENGTDSDATATLQRQNSANPKFSSFFKKITIYLDQSLYPDNHVILWESSRSLALNE 849
            GR+LE G D D  A L + N + PKFSSFFK++TI LDQ LYPDN +I+WE++RS A +E
Sbjct: 247  GRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPAPHE 306

Query: 848  GFEVKRNGDKEFTAIVRLEMNYMPEKFKLSPALSDVLGIEVETRPRIIAAIWQYVKTKKL 669
            GFEVKR GDKEFT  +RLEMNY+PEKFKLS AL +VLGIEV+TRPRIIAAIW YVK +KL
Sbjct: 307  GFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKL 366

Query: 668  QIPTDTSFFTCDPPLRKLFGEDKVKFVMVSQKISQHLTPPQPIHLEHRIKISGDCPVGNT 489
            Q P D SFF CDPPL+K+FGEDK+KF MVSQKISQHL+PPQPIHLEH+IK+SG+CP GN 
Sbjct: 367  QNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPAGNA 426

Query: 488  CYDVLVDVPFSLDKDMSNFLENLEKHREIDACDEAICSAIKKIHEHRRRRAFFLGFCQSP 309
            CYDVLVDVPF + K++S  L N EK++EIDACDEAICSAI+KIHEHRRRRAFFLGF QSP
Sbjct: 427  CYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFSQSP 486

Query: 308  SEFINAFISSQSKDLKTAAGDATRNAEKEHRSEFYNQPWVEDAVIRYLNRKPTAGSDAPG 129
             EFIN  I SQSKDLK  AG+A+RNAEKE RS+F+NQPWVEDAVIRYLNRKP AGSDAPG
Sbjct: 487  VEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDAPG 546

Query: 128  ST 123
            ST
Sbjct: 547  ST 548


>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
          Length = 548

 Score =  475 bits (1223), Expect = e-132
 Identities = 226/302 (74%), Positives = 258/302 (85%)
 Frame = -1

Query: 1028 GRLLENGTDSDATATLQRQNSANPKFSSFFKKITIYLDQSLYPDNHVILWESSRSLALNE 849
            GR+LE G D D  A L + N + PKFSSFFK++TI LDQ LYPDN +I+WE++RS A +E
Sbjct: 247  GRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPAPHE 306

Query: 848  GFEVKRNGDKEFTAIVRLEMNYMPEKFKLSPALSDVLGIEVETRPRIIAAIWQYVKTKKL 669
            GFEVKR GDKEFT  +RLEMNY+PEKFKLS AL +VLGIEV+TRPRIIAAIW YVK +KL
Sbjct: 307  GFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKL 366

Query: 668  QIPTDTSFFTCDPPLRKLFGEDKVKFVMVSQKISQHLTPPQPIHLEHRIKISGDCPVGNT 489
            Q P D SFF CDPPL+K+FGEDK+KF MVSQKISQHL+PPQPIHLEH+IK+SG+CP GN 
Sbjct: 367  QNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPAGNA 426

Query: 488  CYDVLVDVPFSLDKDMSNFLENLEKHREIDACDEAICSAIKKIHEHRRRRAFFLGFCQSP 309
            CYDVLVDVPF + K++S  L N EK++EIDACDEAICSAI+KIHEHRRRRAFFLGF QSP
Sbjct: 427  CYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFSQSP 486

Query: 308  SEFINAFISSQSKDLKTAAGDATRNAEKEHRSEFYNQPWVEDAVIRYLNRKPTAGSDAPG 129
             EFIN  I SQSKDLK  AG+A+RNAEKE RS+F+NQPWVEDAVIRYLNRKP AGSDAPG
Sbjct: 487  VEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDAPG 546

Query: 128  ST 123
            ST
Sbjct: 547  ST 548


>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
            gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
            complex component SNF12 homolog [Cucumis sativus]
          Length = 547

 Score =  462 bits (1190), Expect = e-128
 Identities = 218/302 (72%), Positives = 257/302 (85%)
 Frame = -1

Query: 1028 GRLLENGTDSDATATLQRQNSANPKFSSFFKKITIYLDQSLYPDNHVILWESSRSLALNE 849
            GR+LE+G D D    +QR N   PKFSSFFK++TI LDQ LYPD+H+I+WE++RS A +E
Sbjct: 246  GRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPAPHE 305

Query: 848  GFEVKRNGDKEFTAIVRLEMNYMPEKFKLSPALSDVLGIEVETRPRIIAAIWQYVKTKKL 669
            GFEVKR GDKEF+  +RLEMNY+PEKFKLSPAL +VLGIEV+TRPRIIAAIW YVK +KL
Sbjct: 306  GFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKL 365

Query: 668  QIPTDTSFFTCDPPLRKLFGEDKVKFVMVSQKISQHLTPPQPIHLEHRIKISGDCPVGNT 489
            Q P D SFF CDPPL+K+FGEDK+KF MVSQ+ISQHL PPQPIHLEH++K+SG+ P G  
Sbjct: 366  QNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNSPAGTA 425

Query: 488  CYDVLVDVPFSLDKDMSNFLENLEKHREIDACDEAICSAIKKIHEHRRRRAFFLGFCQSP 309
            CYDVLVDVPF + +++S  L N EK++EIDACDEAIC+AI+KIHEHRRRRAFFLGF QSP
Sbjct: 426  CYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGFSQSP 485

Query: 308  SEFINAFISSQSKDLKTAAGDATRNAEKEHRSEFYNQPWVEDAVIRYLNRKPTAGSDAPG 129
             EFI+A I SQSKDLK  AG+A+RNAEKE RS+F+NQPWVEDAVIRY+NRKP  GSDAPG
Sbjct: 486  VEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATGSDAPG 545

Query: 128  ST 123
            ST
Sbjct: 546  ST 547


>ref|XP_002511197.1| brg-1 associated factor, putative [Ricinus communis]
            gi|223550312|gb|EEF51799.1| brg-1 associated factor,
            putative [Ricinus communis]
          Length = 529

 Score =  459 bits (1180), Expect = e-127
 Identities = 222/302 (73%), Positives = 259/302 (85%)
 Frame = -1

Query: 1028 GRLLENGTDSDATATLQRQNSANPKFSSFFKKITIYLDQSLYPDNHVILWESSRSLALNE 849
            GR+LE+G D   +   Q+  S   KFSS+FKKITIYLDQSLYPDNHVILWES+RS  L+E
Sbjct: 232  GRILEDGKDPLLSGKPQKSYS---KFSSYFKKITIYLDQSLYPDNHVILWESARSPVLSE 288

Query: 848  GFEVKRNGDKEFTAIVRLEMNYMPEKFKLSPALSDVLGIEVETRPRIIAAIWQYVKTKKL 669
            GFEVKR G+KEFTAI+RLEMNY+PEKFKLSP+LS++LGIEVETRP+I+ AIW YVK+K+L
Sbjct: 289  GFEVKRKGNKEFTAIIRLEMNYVPEKFKLSPSLSEILGIEVETRPKILVAIWHYVKSKRL 348

Query: 668  QIPTDTSFFTCDPPLRKLFGEDKVKFVMVSQKISQHLTPPQPIHLEHRIKISGDCPVGNT 489
            QIP D SFF CDPPL+KLFGE+KVKF MVSQKISQHLTPPQPIHLEHRIK+SG+CP G T
Sbjct: 349  QIPNDPSFFMCDPPLKKLFGEEKVKFAMVSQKISQHLTPPQPIHLEHRIKLSGNCPAGTT 408

Query: 488  CYDVLVDVPFSLDKDMSNFLENLEKHREIDACDEAICSAIKKIHEHRRRRAFFLGFCQSP 309
            CYD++VDVP  L KD++ FL + EKH+EIDACDE IC +IKKIHEHRRRRAFFL F QSP
Sbjct: 409  CYDIIVDVPSPLQKDLAAFLASSEKHKEIDACDELICDSIKKIHEHRRRRAFFLDFSQSP 468

Query: 308  SEFINAFISSQSKDLKTAAGDATRNAEKEHRSEFYNQPWVEDAVIRYLNRKPTAGSDAPG 129
            +EFIN  I+SQSKDLK  +GDA+R+AEKE RS+FYNQ WV DAVI YLNRK +AG++ PG
Sbjct: 469  AEFINTLIASQSKDLKLVSGDASRHAEKERRSDFYNQSWVGDAVILYLNRK-SAGNNTPG 527

Query: 128  ST 123
            ST
Sbjct: 528  ST 529


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