BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017577
         (1619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   601   e-169
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   572   e-160
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   563   e-158
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              552   e-155
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   540   e-151

>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  601 bits (1549), Expect = e-169
 Identities = 310/535 (57%), Positives = 385/535 (71%), Gaps = 16/535 (2%)
 Frame = -3

Query: 1557 FKDVFRDLQNLIYNYATKENSFLSMLKAGSKGNMLKFVQHSMCLGYQHSLVPLSFHFPRQ 1378
            FK VFRD+QNL+YNYA+ +NS L+MLKAGSKGN+LK VQH+MCLG Q SLVP+SF  PRQ
Sbjct: 382  FKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQ 441

Query: 1377 FSCISWNNHKRAELI-----FPLGVDRYIPYGVIKSSFLSGLNPLEFFVHSVTNRDASFS 1213
             SC +WNNHK   +I      P     YIP  V+KSSFL+GLNPLE FVHS+T RD+SFS
Sbjct: 442  LSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFS 501

Query: 1212 GHADISGTLFRKLHFFMRDMYVGYDGTVRNCYGDQLIQFSYN------SKNAPGQSKSLM 1051
            GHAD+SGTL RKL FFMRD+YVGYDGTVRN YG+Q++QFSY       S    G++    
Sbjct: 502  GHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALESH 561

Query: 1050 SNVECGEAVGSLAACAISEAAYGALDQPISALENSPLLNLKKVLECGVRKQSGNKTASLF 871
            ++   G  VGSLAACAISEAAY ALDQP+SALE+SPLLNLKK+LE G   ++G KTAS+F
Sbjct: 562  NHAIGGHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMF 621

Query: 870  LSQKLKRWTNGFEYGAIDVKNHLEKLLFQDVVSLVTIFYSPQTGKRTRISPWICYFRITK 691
            LS++L RW +GFEYGA++VK HLE+LL  +VVS V I +SP+T K T   PW+C+F I K
Sbjct: 622  LSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDK 681

Query: 690  EVASRKQLKLQSIINALKFKCXXXXXXXXXXXXXXXLQITYNNCPEDNAMNEN--VYITA 517
            E    ++LKL+S+++AL  +                L IT  +C       E   + IT 
Sbjct: 682  ENVKTRRLKLRSVLDALNMR--YRAATTKAGNDLPNLHITCKDCSVAEVQKEKSEICITV 739

Query: 516  QIVD---DSNNSLNLLQDVVVPFLLETVIKGSSNVKKVDILWKDCPKTSKSCIESSGELY 346
             +V+   D ++ L+ L+DVV+PFLLETVIKG S  KKVDILWK+ P  SKS    +GELY
Sbjct: 740  SVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELY 799

Query: 345  LRVFMSESCDRRKFWRVLLGDCIQIMDMIDWERSHPDDIQDVISAQGIDAARNHFLCTLK 166
            L+VFMSESCDR KFW  L+  C+QI D+IDWERS+PDD+ D+  A GID A  +FLC L 
Sbjct: 800  LQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLH 859

Query: 165  SAISDTGKNVLPEHLALAADCLSCNGEFVPINAKGLLLQRQAASVSAPFAQACFS 1
            SA+S+TGK +LPEHL LAAD L+  GEFVP++AKGL LQR+AA V +PF QACF+
Sbjct: 860  SAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLTLQRKAAGVVSPFMQACFT 914


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  572 bits (1473), Expect = e-160
 Identities = 298/550 (54%), Positives = 379/550 (68%), Gaps = 11/550 (2%)
 Frame = -3

Query: 1617 EKLCHDQQXXXXXXXXXXXAFKDVFRDLQNLIYNYATKENSFLSMLKAGSKGNMLKFVQH 1438
            + L +++Q           AFK  FRD+QNL+Y YA K+NS L+MLKAGSKGN+LK VQ 
Sbjct: 717  QSLWYERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQ 776

Query: 1437 SMCLGYQHSLVPLSFHFPRQFSCISWNNHKRAELI---FPLGVDRYIPYGVIKSSFLSGL 1267
             +CLG QHSLVPLSF  P Q SC +WN  K   LI        + YIPY V+++SFL GL
Sbjct: 777  GLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGL 836

Query: 1266 NPLEFFVHSVTNRDASFSGHADISGTLFRKLHFFMRDMYVGYDGTVRNCYGDQLIQFSYN 1087
            NPLE FVHSVT+RD+SFS +AD+ GTL R+L FFMRD+Y+ YDGTVRN YG+QL+QFSYN
Sbjct: 837  NPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYN 896

Query: 1086 SKNAPGQSKSLMSNVEC----GEAVGSLAACAISEAAYGALDQPISALENSPLLNLKKVL 919
             ++    S  +  +       G+ VGS++ACAISEAAY ALDQPIS LE SPLLNLK+VL
Sbjct: 897  IEHTSTPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVL 956

Query: 918  ECGVRKQSGNKTASLFLSQKLKRWTNGFEYGAIDVKNHLEKLLFQDVVSLVTIFYSPQTG 739
            ECG+RK + ++T SLFLS+KL++  +GFEYGA++VKNHLEKLLF D+VS V I +SPQ G
Sbjct: 957  ECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNG 1016

Query: 738  KRTRISPWICYFRITKEVASRKQLKLQSIINALKFKCXXXXXXXXXXXXXXXLQITYNNC 559
             +T  SPW+C+F + +E+A ++ LK  SII+AL  KC               LQIT  +C
Sbjct: 1017 SKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKC--NSARAESKINLPDLQITSKDC 1074

Query: 558  PEDNAMNEN--VYITAQIVDDSNNSLNL--LQDVVVPFLLETVIKGSSNVKKVDILWKDC 391
              D    ++    IT  IV+   + + L  ++D+V+PFLL  V+KG  +VKKVDILW D 
Sbjct: 1075 FVDMEKEDSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDN 1134

Query: 390  PKTSKSCIESSGELYLRVFMSESCDRRKFWRVLLGDCIQIMDMIDWERSHPDDIQDVISA 211
            P  S     SSG LYLRV++S  C ++ FW VL+  C+QIMDMIDWERSHPD+I D+   
Sbjct: 1135 P-DSDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVV 1193

Query: 210  QGIDAARNHFLCTLKSAISDTGKNVLPEHLALAADCLSCNGEFVPINAKGLLLQRQAASV 31
             GIDA   +FL +LKSAISD GK VLPEHL L A CLS  GEFV +NAKG+  Q++  S+
Sbjct: 1194 YGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSI 1253

Query: 30   SAPFAQACFS 1
            S+PF Q CFS
Sbjct: 1254 SSPFMQGCFS 1263


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  563 bits (1451), Expect = e-158
 Identities = 294/548 (53%), Positives = 372/548 (67%), Gaps = 9/548 (1%)
 Frame = -3

Query: 1617 EKLCHDQQXXXXXXXXXXXAFKDVFRDLQNLIYNYATKENSFLSMLKAGSKGNMLKFVQH 1438
            E+LC+++Q           AF+ VFRD+Q+L+Y YA+++NSFL+M KAGSKGN+LK VQH
Sbjct: 738  ERLCYEKQRSAALSQSSVDAFRLVFRDIQSLVYKYASQDNSFLAMFKAGSKGNLLKLVQH 797

Query: 1437 SMCLGYQHSLVPLSFHFPRQFSCISWNNHKRAELIFPLGVDRYIPYGVIKSSFLSGLNPL 1258
            SMCLG QH+L  LSF  P Q SC  WN  K  +        RYIP+ V++ SFLSGLNP+
Sbjct: 798  SMCLGLQHALASLSFRIPHQLSCAGWNKQKADDATE--SAKRYIPHAVVEGSFLSGLNPI 855

Query: 1257 EFFVHSVTNRDASFSGHADISGTLFRKLHFFMRDMYVGYDGTVRNCYGDQLIQFSYNSKN 1078
            E FVHSVT+RD+SFS +AD+ GTLFR++ FFMRD++  YDGTVRN YG+QL+QFSYN  +
Sbjct: 856  ECFVHSVTSRDSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDD 915

Query: 1077 A-PGQSKSLMSNVE--CGEAVGSLAACAISEAAYGALDQPISALENSPLLNLKKVLECGV 907
              P  S   ++N +   G  VG LAACAISEAAY ALDQPIS LE SPLLNLK VLECG+
Sbjct: 916  MDPSGSVDEINNSDGIAGRPVGPLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGL 975

Query: 906  RKQSGNKTASLFLSQKLKRWTNGFEYGAIDVKNHLEKLLFQDVVSLVTIFYSPQTGKRTR 727
            ++ S ++T SLFLS+KL R  +GFEY A++V+NHLE+LLF D+VS V I +SPQ+  R  
Sbjct: 976  KRNSAHQTMSLFLSEKLGRQRHGFEYAALEVQNHLERLLFSDIVSFVRIIFSPQSDGRMH 1035

Query: 726  ISPWICYFRITKEVASRKQLKLQSIINALKFKCXXXXXXXXXXXXXXXLQITYNNCPEDN 547
             SPW+C+F + KE+  ++ LK+  II+AL+ +C                QIT   C   +
Sbjct: 1036 FSPWVCHFHVYKEIVKKRSLKVHYIIDALEKQCKSKTRFPKV-------QITSRYCTVAD 1088

Query: 546  AMNEN---VYITAQIVDDSNNS---LNLLQDVVVPFLLETVIKGSSNVKKVDILWKDCPK 385
               E      IT  IV+ S N    L  +QD+++PFLLETVIKG   ++KVDILW D PK
Sbjct: 1089 TWKEKKETFCITVTIVETSKNEFIELETIQDLMIPFLLETVIKGFMEIQKVDILWNDKPK 1148

Query: 384  TSKSCIESSGELYLRVFMSESCDRRKFWRVLLGDCIQIMDMIDWERSHPDDIQDVISAQG 205
              KS     GEL+LRV MS   D+ + W  L+ DC+ IMD+IDW RSHPD+I +   A G
Sbjct: 1149 IPKSHNRLRGELFLRVHMSRGSDKTRLWNQLMDDCLSIMDLIDWARSHPDNIHECCLAYG 1208

Query: 204  IDAARNHFLCTLKSAISDTGKNVLPEHLALAADCLSCNGEFVPINAKGLLLQRQAASVSA 25
            IDA    FL  L+SA+SD GK VLPEHL L A+CLS  GEFV +NAKGL  QR+ ASVS 
Sbjct: 1209 IDAGWKFFLNNLQSAMSDVGKTVLPEHLLLVANCLSVTGEFVGLNAKGLKRQREHASVST 1268

Query: 24   PFAQACFS 1
            PF QACFS
Sbjct: 1269 PFVQACFS 1276


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  552 bits (1423), Expect = e-155
 Identities = 290/550 (52%), Positives = 370/550 (67%), Gaps = 11/550 (2%)
 Frame = -3

Query: 1617 EKLCHDQQXXXXXXXXXXXAFKDVFRDLQNLIYNYATKENSFLSMLKAGSKGNMLKFVQH 1438
            + L +++Q           AFK  FRD+QNL+Y YA K+NS L+MLKAGSKGN+LK VQ 
Sbjct: 586  QSLWYERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQ 645

Query: 1437 SMCLGYQHSLVPLSFHFPRQFSCISWNNHKRAELI---FPLGVDRYIPYGVIKSSFLSGL 1267
             +CLG QHSLVPLSF  P Q SC +WN  K   LI        + YIPY V+++SFL GL
Sbjct: 646  GLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGL 705

Query: 1266 NPLEFFVHSVTNRDASFSGHADISGTLFRKLHFFMRDMYVGYDGTVRNCYGDQLIQFSYN 1087
            NPLE FVHSVT+RD+SFS +AD+ GTL R+L FFMRD+Y+ YDGTVRN YG+QL+QFSYN
Sbjct: 706  NPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYN 765

Query: 1086 SKNAPGQSKSLMSNVEC----GEAVGSLAACAISEAAYGALDQPISALENSPLLNLKKVL 919
             ++    S  +  +       G+ VGS++ACAISEAAY ALDQPIS LE SPLLNLK+VL
Sbjct: 766  IEHTSTPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVL 825

Query: 918  ECGVRKQSGNKTASLFLSQKLKRWTNGFEYGAIDVKNHLEKLLFQDVVSLVTIFYSPQTG 739
            ECG+RK + ++T SLFLS+KL++  +GFEYGA++VKNHLEKLLF D+VS V I +SPQ G
Sbjct: 826  ECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNG 885

Query: 738  KRTRISPWICYFRITKEVASRKQLKLQSIINALKFKCXXXXXXXXXXXXXXXLQITYNNC 559
             +T  SPW+C+F + +E+A ++ LK  SII+AL  KC               LQIT  +C
Sbjct: 886  SKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKC--NSARAESKINLPDLQITSKDC 943

Query: 558  PEDNAMNEN--VYITAQIVDDSNNSLNL--LQDVVVPFLLETVIKGSSNVKKVDILWKDC 391
              D    ++    IT  IV+   + + L  ++D+V+PFLL  V+KG             C
Sbjct: 944  FVDMEKEDSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGC------------C 991

Query: 390  PKTSKSCIESSGELYLRVFMSESCDRRKFWRVLLGDCIQIMDMIDWERSHPDDIQDVISA 211
             K S     SSG LYLRV++S  C ++ FW VL+  C+QIMDMIDWERSHPD+I D+   
Sbjct: 992  IKNSDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVV 1051

Query: 210  QGIDAARNHFLCTLKSAISDTGKNVLPEHLALAADCLSCNGEFVPINAKGLLLQRQAASV 31
             GIDA   +FL +LKSAISD GK VLPEHL L A CLS  GEFV +NAKG+  Q++  S+
Sbjct: 1052 YGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSI 1111

Query: 30   SAPFAQACFS 1
            S+PF Q CFS
Sbjct: 1112 SSPFMQGCFS 1121


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  540 bits (1391), Expect = e-151
 Identities = 286/549 (52%), Positives = 372/549 (67%), Gaps = 10/549 (1%)
 Frame = -3

Query: 1617 EKLCHDQQXXXXXXXXXXXAFKDVFRDLQNLIYNYATKENSFLSMLKAGSKGNMLKFVQH 1438
            E LCH++Q           AFK VFRD+Q L Y YA+K+N+ ++M K+GSKGN+LK VQH
Sbjct: 689  EHLCHEKQRSAALSQASVDAFKHVFRDIQTLGYKYASKDNALMAMFKSGSKGNLLKVVQH 748

Query: 1437 SMCLGYQHSLVPLSFHFPRQFSCISWNNHKRAELIFPLGVDRYIPYGVIKSSFLSGLNPL 1258
            SMCLG QHSLVPLSF  P Q SC +WN  K    +       YIP  V++  FL+GLNPL
Sbjct: 749  SMCLGLQHSLVPLSFRMPLQLSCDAWNKQKAENAVEC--ARSYIPSAVVEGCFLTGLNPL 806

Query: 1257 EFFVHSVTNRDASFSGHADISGTLFRKLHFFMRDMYVGYDGTVRNCYGDQLIQFSYN--- 1087
            E FVHSVT+R++SFS +AD+ GTL R+L FFMRD++  YDG+VR+ YG+QLIQFSYN   
Sbjct: 807  ECFVHSVTSRESSFSDNADLPGTLTRRLMFFMRDVHAAYDGSVRSAYGNQLIQFSYNIDE 866

Query: 1086 --SKNAPGQSKSLMSNVE--CGEAVGSLAACAISEAAYGALDQPISALENSPLLNLKKVL 919
              S    G +K ++ N +   G+ VGSLAAC+ISEAAY ALDQPIS LE SPLLNLK VL
Sbjct: 867  GRSAETYGTAK-IVDNYDGMAGKPVGSLAACSISEAAYSALDQPISLLEKSPLLNLKNVL 925

Query: 918  ECGVRKQSGNKTASLFLSQKLKRWTNGFEYGAIDVKNHLEKLLFQDVVSLVTIFYSPQTG 739
            ECG++K + +K+ SLFLS+KL R  +GFEYGA+ V++HLE+LLF D+VS+  I +S Q+ 
Sbjct: 926  ECGLKKSNAHKSMSLFLSEKLGRRRHGFEYGALKVQDHLERLLFSDIVSVSRIIFSSQSE 985

Query: 738  KRTRISPWICYFRITKEVASRKQLKLQSIINALKFKCXXXXXXXXXXXXXXXLQITYNNC 559
             +T  SPW+C+F + KE+  ++ L + SIIN L  +C                 I  N+ 
Sbjct: 986  SKTCFSPWVCHFHVYKEIMKKRNLNVDSIINILNGRCKSNTNLPNVQISCKSCSIADNHR 1045

Query: 558  PEDNAMNENVYITAQIVDDSNNS---LNLLQDVVVPFLLETVIKGSSNVKKVDILWKDCP 388
             ++    E + IT  IV+ S NS   L  +QD+++PFLLETV+KG   + KVDILWKD P
Sbjct: 1046 EKE----ETLCITVTIVERSKNSSTRLATIQDLMIPFLLETVLKGLMEINKVDILWKDWP 1101

Query: 387  KTSKSCIESSGELYLRVFMSESCDRRKFWRVLLGDCIQIMDMIDWERSHPDDIQDVISAQ 208
            + SK+  +  GELYLRV MS   ++ + W +L+  C+ IMDMIDW  S PD+++D   A 
Sbjct: 1102 RISKTHNQPYGELYLRVSMSADSEKTRLWNLLMDYCLPIMDMIDWTCSRPDNVRDFSLAY 1161

Query: 207  GIDAARNHFLCTLKSAISDTGKNVLPEHLALAADCLSCNGEFVPINAKGLLLQRQAASVS 28
            GIDA    FL  L+SAISD GK+VLPEH+ L A+CLS  GEFV +NAKG   QR+ ASVS
Sbjct: 1162 GIDAGWKFFLQRLESAISDVGKSVLPEHMLLVANCLSVTGEFVGLNAKGWKRQREDASVS 1221

Query: 27   APFAQACFS 1
            +PF QACFS
Sbjct: 1222 SPFVQACFS 1230