BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017564
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                55   4e-10
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    47   8e-08

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 54.7 bits (130), Expect(2) = 4e-10
 Identities = 23/46 (50%), Positives = 31/46 (67%)
 Frame = -1

Query: 153 IKVACITDKLRECKLRWFSHIRRRLTMPPVRRVESVTIDGVRRREG 16
           + VA + DKLRE +LRWF H++RR    PVRR E + ++G RR  G
Sbjct: 608 VGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRG 653



 Score = 34.3 bits (77), Expect(2) = 4e-10
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 6/30 (20%)
 Frame = -2

Query: 215 PAMLYGSECWPLRKSH------ESLVILRW 144
           PA+LYG+ECWP++ +H        + +LRW
Sbjct: 560 PALLYGAECWPVKNAHVHKMHVAEMRMLRW 589


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 47.0 bits (110), Expect(2) = 8e-08
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = -1

Query: 153 IKVACITDKLRECKLRWFSHIRRRLTMPPVRRVESVTID 37
           + VA + DKLRE +LRWF H++RR    PVRR E + ++
Sbjct: 140 VGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVE 178



 Score = 34.3 bits (77), Expect(2) = 8e-08
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 6/30 (20%)
 Frame = -2

Query: 215 PAMLYGSECWPLRKSH------ESLVILRW 144
           PA+LYG+ECWP++ +H        + +LRW
Sbjct: 92  PALLYGAECWPVKNAHVHKMHVAEMRMLRW 121