BLASTX nr result

ID: Atractylodes21_contig00017540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017540
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...    99   3e-19
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...    99   4e-19
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    98   7e-19
emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]    92   6e-17
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...    87   2e-15

>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/116 (49%), Positives = 69/116 (59%)
 Frame = +1

Query: 148 MAFFRHYTNGTVSEGVLNDKSQHGSIDRAENNVGNDDLDANSSVDKEFETKMEDGQYGSD 327
           MAFFR+++N TVS GV+ DKSQ  + +R   +VGND  DA SS +KEF+  ME  QY SD
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSS-EKEFDMNME-AQYDSD 58

Query: 328 GEPYTVSRLQYXXXXXXXXXXXSLSNLQASTTSTKAAGRWGSTFWNDCQPMHQRPG 495
           GEP   SRLQ              SNLQ + + T   GRWGSTFW DC  M  + G
Sbjct: 59  GEPDGSSRLQTEATADDGDAVKE-SNLQTTGSKTAMVGRWGSTFWKDCGQMDPQNG 113


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 57/116 (49%), Positives = 69/116 (59%)
 Frame = +1

Query: 148 MAFFRHYTNGTVSEGVLNDKSQHGSIDRAENNVGNDDLDANSSVDKEFETKMEDGQYGSD 327
           MAFFR+++N TVS GV+ DKSQ  + +R   +VGND  DA SS +KEF+  ME  QY SD
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSS-EKEFDMNME-AQYESD 58

Query: 328 GEPYTVSRLQYXXXXXXXXXXXSLSNLQASTTSTKAAGRWGSTFWNDCQPMHQRPG 495
           GEP   SRLQ              SNLQ + + T   GRWGSTFW DC  M  + G
Sbjct: 59  GEPDGSSRLQTEATADDGDAVKE-SNLQTTGSKTAMVGRWGSTFWKDCGQMDPQNG 113


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 56/116 (48%), Positives = 74/116 (63%)
 Frame = +1

Query: 148 MAFFRHYTNGTVSEGVLNDKSQHGSIDRAENNVGNDDLDANSSVDKEFETKMEDGQYGSD 327
           MAFFR+Y+N TV++ VL++K Q  +IDR  ++V N+ +DA SS +K+FE+K+ DGQY SD
Sbjct: 1   MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSS-EKDFESKV-DGQYQSD 58

Query: 328 GEPYTVSRLQYXXXXXXXXXXXSLSNLQASTTSTKAAGRWGSTFWNDCQPMHQRPG 495
           G+      LQ             +SNLQ S   T  AG+WGSTFW DCQPM  R G
Sbjct: 59  GDTNDAG-LQ-NEAAAADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPMGHRNG 112


>emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]
          Length = 626

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 58/130 (44%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
 Frame = +1

Query: 112 DTE*LRF*VAGRMAFF--RHYTNGTVSEGVLNDKSQHGSIDRAENNVGNDDLDANSSVDK 285
           +TE LRF +      F  R+Y+N TV++ VL++K Q  +IDR  ++V N+ +DA SS +K
Sbjct: 28  ETETLRFVIFRCRRSFPARNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSS-EK 86

Query: 286 EFETKMEDGQYGSDGEPYTVSRLQYXXXXXXXXXXXSLSNLQASTTSTKAAGRWGSTFWN 465
           +FE+K+ DGQY SDG+      LQ             +SNLQ S   T  AG+WGSTFW 
Sbjct: 87  DFESKV-DGQYQSDGDTNDAG-LQ-NEAAAADDIGLRISNLQPSGRRTAMAGKWGSTFWK 143

Query: 466 DCQPMHQRPG 495
           DCQPM  R G
Sbjct: 144 DCQPMGHRNG 153


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/110 (44%), Positives = 59/110 (53%)
 Frame = +1

Query: 148 MAFFRHYTNGTVSEGVLNDKSQHGSIDRAENNVGNDDLDANSSVDKEFETKMEDGQYGSD 327
           MAFFR++ N TVS G + DK      +    +VGN+  D  SS +KEF+  +E  QY SD
Sbjct: 1   MAFFRNFVNDTVSHGAMEDKGLGQDANNIHRSVGNEYTDGTSS-EKEFDMNLE-AQYESD 58

Query: 328 GEPYTVSRLQYXXXXXXXXXXXSLSNLQASTTSTKAAGRWGSTFWNDCQP 477
           G P    RLQ              SNLQAS +     GRWGSTFW DCQP
Sbjct: 59  GGPDDACRLQNEGTADDRDGLRE-SNLQASGSKASTVGRWGSTFWKDCQP 107


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