BLASTX nr result

ID: Atractylodes21_contig00017319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017319
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...   207   3e-51
ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici...   199   1e-48
ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|2...   190   5e-46
ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Rici...   188   2e-45
ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like...   187   6e-45

>ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
           gi|147769463|emb|CAN70348.1| hypothetical protein
           VITISV_012580 [Vitis vinifera]
           gi|297736494|emb|CBI25365.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  207 bits (528), Expect = 3e-51
 Identities = 102/157 (64%), Positives = 115/157 (73%)
 Frame = -1

Query: 618 RLLLEIDTMAPPEHSGGGSQQDGSYNKEANFDTNMVXXXXXXXXXXXXXLGLNSIVRCAL 439
           RLLL+ D  A P     GS+   SY  EANFDTNMV             LGLNSIVRCAL
Sbjct: 10  RLLLDTDPGASPNV---GSRMRSSYTNEANFDTNMVIILAALLCALICALGLNSIVRCAL 66

Query: 438 RCSRRLAFETTDATAVRLATTGVKKKALKQFPVGVYGAGLEIPATECPICLGEFMDGEKV 259
           RCSRRLAFET D TA RLA TG+KK AL+Q PV VYG+G  IPAT+CPICLGEF  G+KV
Sbjct: 67  RCSRRLAFETADETAARLAATGLKKSALRQIPVAVYGSGTNIPATDCPICLGEFEQGDKV 126

Query: 258 RILPQCNHGFHVRCIDVWLASHSSCPTCRRSLVELPP 148
           R+LP+C+HGFH++CID WL SHSSCPTCR SL+E PP
Sbjct: 127 RVLPKCHHGFHMKCIDTWLVSHSSCPTCRHSLLEHPP 163


>ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223539997|gb|EEF41575.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 208

 Score =  199 bits (505), Expect = 1e-48
 Identities = 105/175 (60%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
 Frame = -1

Query: 618 RLLLEIDTMAPPEHSGGGSQQDGSYNKEANFDTNMVXXXXXXXXXXXXXLGLNSIVRCAL 439
           RLLL  ++  PP +      +  SY  EANFDTNMV             LGLNSIVRCAL
Sbjct: 13  RLLLNTESNTPPINGS----RIRSYTNEANFDTNMVIILAALLCALICALGLNSIVRCAL 68

Query: 438 RCSRRLAFETTDATAVRLATTGVKKKALKQFPVGVYGA-GLEIPATECPICLGEFMDGEK 262
           RCSRR AFET D  A RLA TG+KK AL+Q PV +YGA G++I AT+C ICLGEF DGEK
Sbjct: 69  RCSRRFAFETPDEAAARLAATGLKKSALRQIPVVIYGAAGIQIIATDCAICLGEFSDGEK 128

Query: 261 VRILPQCNHGFHVRCIDVWLASHSSCPTCRRSLVELP-PGRSRDGGVATRVDIQV 100
           VR+LP+CNHGFHVRCID WL SHSSCPTCR+SL+E P PG S     AT  D+++
Sbjct: 129 VRVLPKCNHGFHVRCIDTWLGSHSSCPTCRQSLLEQPAPGNSD----ATEPDVEI 179


>ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|222867703|gb|EEF04834.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  190 bits (483), Expect = 5e-46
 Identities = 95/164 (57%), Positives = 109/164 (66%)
 Frame = -1

Query: 603 IDTMAPPEHSGGGSQQDGSYNKEANFDTNMVXXXXXXXXXXXXXLGLNSIVRCALRCSRR 424
           +DT+        G++   SY  E NFDTNMV             LGLNSIVRC LRCS R
Sbjct: 6   LDTVPLDVAPANGNRTHDSYINETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSR 65

Query: 423 LAFETTDATAVRLATTGVKKKALKQFPVGVYGAGLEIPATECPICLGEFMDGEKVRILPQ 244
            A ETT+  A RLA TG+KK+ L+Q PV +YGAG  I ATECPICLGEF+DGEKVR+LP+
Sbjct: 66  FALETTEEAAARLAATGLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPK 125

Query: 243 CNHGFHVRCIDVWLASHSSCPTCRRSLVELPPGRSRDGGVATRV 112
           CNHGFHVRCID WL SHSSCP CR SL+E     + D G A  V
Sbjct: 126 CNHGFHVRCIDTWLLSHSSCPNCRHSLLE----HTTDSGAAQEV 165


>ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Ricinus communis]
           gi|223531856|gb|EEF33673.1| RING-H2 finger protein
           ATL5A, putative [Ricinus communis]
          Length = 186

 Score =  188 bits (478), Expect = 2e-45
 Identities = 95/165 (57%), Positives = 111/165 (67%)
 Frame = -1

Query: 624 MQRLLLEIDTMAPPEHSGGGSQQDGSYNKEANFDTNMVXXXXXXXXXXXXXLGLNSIVRC 445
           M R LLE + +  P+ S  G++   SY   ANFDTNMV             LGLNSIVRC
Sbjct: 1   MHRRLLETE-LTVPQPSPDGTRTRDSYIIGANFDTNMVIILAALLCALLGALGLNSIVRC 59

Query: 444 ALRCSRRLAFETTDATAVRLATTGVKKKALKQFPVGVYGAGLEIPATECPICLGEFMDGE 265
           ALRCS R + ET + TA RLA  G+KK+ L+Q PV VYG  + IPATECPICLGEF+DGE
Sbjct: 60  ALRCSSRFSLETPEQTAARLAAKGLKKRELRQIPVAVYGTEVSIPATECPICLGEFLDGE 119

Query: 264 KVRILPQCNHGFHVRCIDVWLASHSSCPTCRRSLVELPPGRSRDG 130
           KVR+LP+CNHGFHVRCID WL SHSSCP CR SL+     +   G
Sbjct: 120 KVRLLPKCNHGFHVRCIDTWLLSHSSCPNCRLSLLXSGAAQEESG 164


>ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like [Vitis vinifera]
          Length = 195

 Score =  187 bits (474), Expect = 6e-45
 Identities = 99/166 (59%), Positives = 112/166 (67%)
 Frame = -1

Query: 618 RLLLEIDTMAPPEHSGGGSQQDGSYNKEANFDTNMVXXXXXXXXXXXXXLGLNSIVRCAL 439
           RLLL  DT  P   S G S  + +Y  E NFDTNMV             LGLNSIVRCA+
Sbjct: 15  RLLL--DTPEPSTMSNGNSTHE-AYVNETNFDTNMVIILAALLCALIGALGLNSIVRCAM 71

Query: 438 RCSRRLAFETTDATAVRLATTGVKKKALKQFPVGVYGAGLEIPATECPICLGEFMDGEKV 259
           RCSRRL+ E+    A     TG+KK+AL+Q PV VYG G+EIPATECPICLGEF+ GEKV
Sbjct: 72  RCSRRLSPESQGQAA-----TGLKKRALRQIPVAVYGPGVEIPATECPICLGEFVQGEKV 126

Query: 258 RILPQCNHGFHVRCIDVWLASHSSCPTCRRSLVELPPGRSRDGGVA 121
           R+LP+CNHGFHVRCID WL SHSSCP CR SL+E P      G VA
Sbjct: 127 RVLPKCNHGFHVRCIDTWLVSHSSCPNCRHSLLERPTTSDAAGEVA 172


Top