BLASTX nr result

ID: Atractylodes21_contig00017287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017287
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
gb|ABK94006.1| unknown [Populus trichocarpa]                          160   8e-38
ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT...   160   1e-37
emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]   159   2e-37
gb|AFK46964.1| unknown [Lotus japonicus]                              152   4e-35

>ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|222858200|gb|EEE95747.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  163 bits (412), Expect = 2e-38
 Identities = 93/157 (59%), Positives = 105/157 (66%)
 Frame = +1

Query: 13  MATISCTVQLIFASSDAKPLNNLSPVVCKLDSQFMGMRKRLGFCRPTSRIGPSSFGSRTT 192
           MA+I  T  L  AS+      +  P + KL+SQF+G++  +G+ RP  RIGPS+ GSR  
Sbjct: 1   MASILSTTHLTLASNP----QSSQPFLPKLNSQFLGLQSNVGWLRPC-RIGPSN-GSRAK 54

Query: 193 CWXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA 372
           CW                           AEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA
Sbjct: 55  CWFKFGKNGVD------------------AEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA 96

Query: 373 VEGTYDKMEALLCQNIHPVDILLMMAASEGDKPKIEE 483
           VEGTYDKMEALL QNIHPVDILLM+AASEGDKPKIEE
Sbjct: 97  VEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEE 133


>gb|ABK94006.1| unknown [Populus trichocarpa]
          Length = 171

 Score =  160 bits (406), Expect = 8e-38
 Identities = 92/157 (58%), Positives = 104/157 (66%)
 Frame = +1

Query: 13  MATISCTVQLIFASSDAKPLNNLSPVVCKLDSQFMGMRKRLGFCRPTSRIGPSSFGSRTT 192
           MA+I  T  L  AS+      +  P + KL+SQF+G++  +G+ RP  RIGPS+ GSR  
Sbjct: 1   MASILSTTHLTLASNP----QSSQPFLPKLNSQFLGLQSNVGWLRPC-RIGPSN-GSRAK 54

Query: 193 CWXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA 372
           CW                           AEG GIYGSQTRDDFDRDDVEQYFNYMGMLA
Sbjct: 55  CWFKFGKNGVD------------------AEGDGIYGSQTRDDFDRDDVEQYFNYMGMLA 96

Query: 373 VEGTYDKMEALLCQNIHPVDILLMMAASEGDKPKIEE 483
           VEGTYDKMEALL QNIHPVDILLM+AASEGDKPKIEE
Sbjct: 97  VEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEE 133


>ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera]
           gi|297735982|emb|CBI23956.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  160 bits (404), Expect = 1e-37
 Identities = 92/157 (58%), Positives = 104/157 (66%)
 Frame = +1

Query: 13  MATISCTVQLIFASSDAKPLNNLSPVVCKLDSQFMGMRKRLGFCRPTSRIGPSSFGSRTT 192
           MA+I CT  L+F S      +N  P+     SQ +G+ ++L +  PT R+GPS+ GSR T
Sbjct: 1   MASIPCTTHLLFTSKPQISPSN-PPI---FTSQLLGIPRKLSWSTPT-RLGPSN-GSRAT 54

Query: 193 CWXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA 372
           CW                           AEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA
Sbjct: 55  CWFRFGNRGVD------------------AEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA 96

Query: 373 VEGTYDKMEALLCQNIHPVDILLMMAASEGDKPKIEE 483
           VEGTYDKMEALL QNIHPVDILLMMAASEGD+PKIEE
Sbjct: 97  VEGTYDKMEALLSQNIHPVDILLMMAASEGDQPKIEE 133


>emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]
          Length = 172

 Score =  159 bits (403), Expect = 2e-37
 Identities = 92/157 (58%), Positives = 104/157 (66%)
 Frame = +1

Query: 13  MATISCTVQLIFASSDAKPLNNLSPVVCKLDSQFMGMRKRLGFCRPTSRIGPSSFGSRTT 192
           MA+I CT  L+F S      +N  P+     SQ +G+ ++L +  PT R+GPS+ GSR T
Sbjct: 1   MASIPCTTHLLFTSKPQISPSN-PPI---FTSQXLGIPRKLSWSTPT-RLGPSN-GSRAT 54

Query: 193 CWXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA 372
           CW                           AEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA
Sbjct: 55  CWFRFGNRGVD------------------AEGAGIYGSQTRDDFDRDDVEQYFNYMGMLA 96

Query: 373 VEGTYDKMEALLCQNIHPVDILLMMAASEGDKPKIEE 483
           VEGTYDKMEALL QNIHPVDILLMMAASEGD+PKIEE
Sbjct: 97  VEGTYDKMEALLSQNIHPVDILLMMAASEGDQPKIEE 133


>gb|AFK46964.1| unknown [Lotus japonicus]
          Length = 175

 Score =  152 bits (383), Expect = 4e-35
 Identities = 85/140 (60%), Positives = 96/140 (68%), Gaps = 2/140 (1%)
 Frame = +1

Query: 70  LNNLSPVVCKLD--SQFMGMRKRLGFCRPTSRIGPSSFGSRTTCWXXXXXXXXXXXXXXX 243
           LN+L   V  L+  S F+G+R+R+G  R TS IGPS+ GS+ TCW               
Sbjct: 17  LNSLPSPVSSLNLASGFLGIRRRVGCLRLTSSIGPSN-GSKATCWFRFGKNGVD------ 69

Query: 244 XXXXXXXXXXXXAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLCQNIH 423
                       AEGAGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALL Q IH
Sbjct: 70  ------------AEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQKIH 117

Query: 424 PVDILLMMAASEGDKPKIEE 483
           PVDILL++AASEGD PKIEE
Sbjct: 118 PVDILLLLAASEGDMPKIEE 137


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