BLASTX nr result

ID: Atractylodes21_contig00017260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017260
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD83317.1| Fgenesh protein 73 [Beta vulgaris]                      83   4e-14
ref|NP_190352.1| DNA binding protein [Arabidopsis thaliana] gi|4...    72   9e-11
gb|AAD26956.1| hypothetical protein [Arabidopsis thaliana] gi|61...    71   1e-10
gb|ABW81022.1| unknown [Arabidopsis lyrata subsp. lyrata]              69   6e-10
ref|XP_002909311.1| conserved hypothetical protein [Phytophthora...    69   7e-10

>gb|ABD83317.1| Fgenesh protein 73 [Beta vulgaris]
          Length = 412

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 43/108 (39%), Positives = 59/108 (54%)
 Frame = +2

Query: 224 WKTKEDVALISAWCKASEDKICGKNQRRTSLWTRVKELYDEVRAENSEELNPRNNNQMKG 403
           W   ED  L+SA+   S DK+ G  Q++   W +V E ++E R  N  E  PRN + +KG
Sbjct: 160 WDQVEDELLVSAFMNTSLDKVSGTYQKKNIFWGKVWEAFEEGRIANPTETAPRNVDMVKG 219

Query: 404 RWKRLNENANKWIAIYREVYRRQKKSGMSLKDVEKEAHAIYEVGGSKF 547
           RW RL     +W A Y E   R KKSG +  DV +EAHA++     +F
Sbjct: 220 RWSRLAPRVLRWAAFYDEALAR-KKSGQNDDDVLREAHALHRRKNGRF 266


>ref|NP_190352.1| DNA binding protein [Arabidopsis thaliana]
           gi|4741185|emb|CAB41851.1| hypothetical protein
           [Arabidopsis thaliana] gi|189303599|gb|ACD85799.1|
           At3g47680 [Arabidopsis thaliana]
           gi|332644797|gb|AEE78318.1| DNA binding protein
           [Arabidopsis thaliana]
          Length = 302

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 38/109 (34%), Positives = 53/109 (48%)
 Frame = +2

Query: 221 KWKTKEDVALISAWCKASEDKICGKNQRRTSLWTRVKELYDEVRAENSEELNPRNNNQMK 400
           KW   ED+ L+SAW   S+D + G  Q+  + W+R+   Y      N  E   R    +K
Sbjct: 49  KWSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYYGASPKLNGVE--KRETGHIK 106

Query: 401 GRWKRLNENANKWIAIYREVYRRQKKSGMSLKDVEKEAHAIYEVGGSKF 547
            RW ++NE   K++  Y E   +QK SG +  DV   AH IY     KF
Sbjct: 107 QRWTKINEGVGKFVGSY-EAATKQKSSGQNDDDVVALAHEIYNSEHGKF 154


>gb|AAD26956.1| hypothetical protein [Arabidopsis thaliana]
           gi|61676918|gb|AAP21683.2| hypothetical protein
           [Arabidopsis thaliana] gi|93007352|gb|ABE97179.1|
           unknown [Arabidopsis thaliana]
          Length = 311

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/102 (34%), Positives = 53/102 (51%)
 Frame = +2

Query: 221 KWKTKEDVALISAWCKASEDKICGKNQRRTSLWTRVKELYDEVRAENSEELNPRNNNQMK 400
           KW  KED+ L+S+W   S+D + G  Q+  + W+R+   YD     N   L  R    +K
Sbjct: 59  KWSAKEDMVLVSSWLNTSKDAVIGNEQKANTFWSRIAAYYDASPQLNG--LRKRMQGNIK 116

Query: 401 GRWKRLNENANKWIAIYREVYRRQKKSGMSLKDVEKEAHAIY 526
            RW ++N+   K++  Y E   R+K SG +  DV   AH I+
Sbjct: 117 QRWAKINDGVCKFVGSY-EAASREKSSGQNDNDVISLAHEIF 157


>gb|ABW81022.1| unknown [Arabidopsis lyrata subsp. lyrata]
          Length = 321

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
 Frame = +2

Query: 212 KCDKWKTKEDVALISAWCKASEDKICGKNQRRTSLWTRVKELYDEVRAENSEELNPRNNN 391
           K +KW ++ED+ LISAW   S+D I G  QR  + W R+   Y    + N      R   
Sbjct: 75  KRNKWTSQEDLVLISAWLNTSKDAIVGNEQRGVAFWKRIAAYY--AASPNISGEKKREPT 132

Query: 392 QMKGRWKRLNENANKWIAIYREVYRRQKKSGMSLKDVEKEAHAIYEVG-GSKFN 550
             K RW ++NE   K++  + +    Q  SGM+  D+ K AH I+E    +KFN
Sbjct: 133 HFKQRWAKINEQVCKFVGSF-QAAAGQVSSGMNDDDLIKLAHQIFEADYDNKFN 185


>ref|XP_002909311.1| conserved hypothetical protein [Phytophthora infestans T30-4]
           gi|262100073|gb|EEY58125.1| conserved hypothetical
           protein [Phytophthora infestans T30-4]
          Length = 241

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +2

Query: 224 WKTKEDVALISAWCKASEDKICGKNQRRTSLWTRVKELYDEVRAENSEELNPRNNNQMKG 403
           W  KED AL +AWC  S++ I G +Q+  SLWT + + Y  +   N   L       +K 
Sbjct: 7   WSDKEDAALCTAWCATSQNPIAGADQKADSLWTLILQSYRTIVPGNKRSL-----IALKN 61

Query: 404 RWKRLNENANKWIAIYREVYRRQKKSGMSLKDVEKEAHAIYE-VGGSKFN 550
           RW  +N + + W+     V  RQ +SG + KD  ++AH +YE + G +F+
Sbjct: 62  RWSDINRDVS-WLVGCLVVVVRQNESGKTEKDRFEDAHKLYEALQGEEFS 110


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