BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017237
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...   195   4e-48
gb|AAY89344.1| RNA polymerase II second largest subunit [Petunia...   192   2e-47
gb|AAC64013.1| RNA polymerase II subunit 2 [Chironia linoides]        191   4e-47
ref|XP_002971836.1| hypothetical protein SELMODRAFT_148107 [Sela...   191   5e-47
ref|XP_002972363.1| hypothetical protein SELMODRAFT_172903 [Sela...   191   5e-47

>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/98 (92%), Positives = 94/98 (95%)
 Frame = +3

Query: 3    RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRYGGLRFGEMERDCMIAHGAAHFLKERLFD 182
            RLKHMVDDKIHSRGRGPVQILTRQPAEGRSR GGLRFGEMERDCMIAHGAAHFLKERLFD
Sbjct: 1062 RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFD 1121

Query: 183  QSDAYRIHVCECCGLIALTNLKKVSFECRSCKNKTEVV 296
            QSDAYRIHVCECCGLIA+ NLKK SFECR CKNKT++V
Sbjct: 1122 QSDAYRIHVCECCGLIAIANLKKSSFECRGCKNKTDIV 1159


>gb|AAY89344.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1203

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/98 (91%), Positives = 95/98 (96%)
 Frame = +3

Query: 3    RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRYGGLRFGEMERDCMIAHGAAHFLKERLFD 182
            RLKHMVDDKIHSRGRGPVQILTRQPAEGRSR GGLRFGEMERDCMIAHGAAHFLKERLFD
Sbjct: 1068 RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFD 1127

Query: 183  QSDAYRIHVCECCGLIALTNLKKVSFECRSCKNKTEVV 296
            QSDAYRIHVC+ CGLIA+ NLKK+SFECRSCKNKT++V
Sbjct: 1128 QSDAYRIHVCQQCGLIAIANLKKISFECRSCKNKTDIV 1165


>gb|AAC64013.1| RNA polymerase II subunit 2 [Chironia linoides]
          Length = 256

 Score =  191 bits (486), Expect = 4e-47
 Identities = 91/98 (92%), Positives = 94/98 (95%)
 Frame = +3

Query: 3   RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRYGGLRFGEMERDCMIAHGAAHFLKERLFD 182
           RLKHMVDDKIHSRGRGPVQILTRQPAEGRSR GGLRFGEMERDCMIAHGAAHFLKERLFD
Sbjct: 154 RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFD 213

Query: 183 QSDAYRIHVCECCGLIALTNLKKVSFECRSCKNKTEVV 296
           QSDAYRIHVCE CGLIA+ NLKK SFECRSCKNKT++V
Sbjct: 214 QSDAYRIHVCERCGLIAIANLKKNSFECRSCKNKTDIV 251


>ref|XP_002971836.1| hypothetical protein SELMODRAFT_148107 [Selaginella moellendorffii]
            gi|300160135|gb|EFJ26753.1| hypothetical protein
            SELMODRAFT_148107 [Selaginella moellendorffii]
          Length = 1178

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/98 (91%), Positives = 94/98 (95%)
 Frame = +3

Query: 3    RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRYGGLRFGEMERDCMIAHGAAHFLKERLFD 182
            RLKHMVDDKIHSRGRGPVQILTRQPAEGRSR GGLRFGEMERDCMIAHGAAHFLKERLFD
Sbjct: 1042 RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFD 1101

Query: 183  QSDAYRIHVCECCGLIALTNLKKVSFECRSCKNKTEVV 296
            QSDAYR+HVCE CGLIA+ NLKK +FECRSCKNKTE+V
Sbjct: 1102 QSDAYRVHVCEHCGLIAIANLKKNTFECRSCKNKTEIV 1139


>ref|XP_002972363.1| hypothetical protein SELMODRAFT_172903 [Selaginella moellendorffii]
            gi|300159830|gb|EFJ26449.1| hypothetical protein
            SELMODRAFT_172903 [Selaginella moellendorffii]
          Length = 1178

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/98 (91%), Positives = 94/98 (95%)
 Frame = +3

Query: 3    RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRYGGLRFGEMERDCMIAHGAAHFLKERLFD 182
            RLKHMVDDKIHSRGRGPVQILTRQPAEGRSR GGLRFGEMERDCMIAHGAAHFLKERLFD
Sbjct: 1042 RLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFD 1101

Query: 183  QSDAYRIHVCECCGLIALTNLKKVSFECRSCKNKTEVV 296
            QSDAYR+HVCE CGLIA+ NLKK +FECRSCKNKTE+V
Sbjct: 1102 QSDAYRVHVCEHCGLIAIANLKKNTFECRSCKNKTEIV 1139