BLASTX nr result

ID: Atractylodes21_contig00017195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017195
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
pdb|3TUU|A Chain A, Structure Of Dihydrodipicolinate Synthase Fr...   233   1e-59
ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, c...   233   1e-59
ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Rici...   230   8e-59
ref|XP_002320068.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58

>ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|222843027|gb|EEE80574.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  236 bits (601), Expect = 2e-60
 Identities = 114/139 (82%), Positives = 121/139 (87%)
 Frame = -3

Query: 419 NRTSTDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQXXXXXXXXXXXXXXXXGQLMS 240
           NRTS +DIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQ                GQLMS
Sbjct: 56  NRTSAEDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVNGAEGVIVGGTTGEGQLMS 115

Query: 239 WDEHIMLIGHTINCFGTSIKVIGNTGSNSTREAVHATEQGFAVGMHAALHINPYYGKTSL 60
           WDEHIMLIGHT+NCFG+S+KVIGNTGSNSTREA+HATEQGFAVGMHAALHINPYYGKTS+
Sbjct: 116 WDEHIMLIGHTVNCFGSSVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSV 175

Query: 59  EGMVAHFQCVLPMGPTIIY 3
           EGMV+HF CVLPMGPTIIY
Sbjct: 176 EGMVSHFDCVLPMGPTIIY 194


>pdb|3TUU|A Chain A, Structure Of Dihydrodipicolinate Synthase From The Common
           Grapevine gi|400261064|pdb|3TUU|B Chain B, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261065|pdb|3TUU|C Chain C, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261066|pdb|3TUU|D Chain D, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261067|pdb|3TUU|E Chain E, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261068|pdb|3TUU|F Chain F, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261069|pdb|3TUU|G Chain G, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261070|pdb|3TUU|H Chain H, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
          Length = 346

 Score =  233 bits (594), Expect = 1e-59
 Identities = 114/139 (82%), Positives = 120/139 (86%)
 Frame = -3

Query: 419 NRTSTDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQXXXXXXXXXXXXXXXXGQLMS 240
           NRTS DDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQ                GQLMS
Sbjct: 37  NRTSVDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVDGAEGVIVGGTTGEGQLMS 96

Query: 239 WDEHIMLIGHTINCFGTSIKVIGNTGSNSTREAVHATEQGFAVGMHAALHINPYYGKTSL 60
           WDEHIMLIGHT+NCFG SIKVIGNTGSNSTREA+HATEQGFAVGMHAALHINPYYGKTSL
Sbjct: 97  WDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSL 156

Query: 59  EGMVAHFQCVLPMGPTIIY 3
           EG+V+HF+ VLPMGPT+IY
Sbjct: 157 EGLVSHFESVLPMGPTVIY 175


>ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, chloroplastic [Vitis
           vinifera] gi|296089164|emb|CBI38867.3| unnamed protein
           product [Vitis vinifera]
          Length = 365

 Score =  233 bits (594), Expect = 1e-59
 Identities = 114/139 (82%), Positives = 120/139 (86%)
 Frame = -3

Query: 419 NRTSTDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQXXXXXXXXXXXXXXXXGQLMS 240
           NRTS DDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQ                GQLMS
Sbjct: 56  NRTSVDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVDGAEGVIVGGTTGEGQLMS 115

Query: 239 WDEHIMLIGHTINCFGTSIKVIGNTGSNSTREAVHATEQGFAVGMHAALHINPYYGKTSL 60
           WDEHIMLIGHT+NCFG SIKVIGNTGSNSTREA+HATEQGFAVGMHAALHINPYYGKTSL
Sbjct: 116 WDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSL 175

Query: 59  EGMVAHFQCVLPMGPTIIY 3
           EG+V+HF+ VLPMGPT+IY
Sbjct: 176 EGLVSHFESVLPMGPTVIY 194


>ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Ricinus communis]
           gi|223539104|gb|EEF40700.1| dihydrodipicolinate
           synthase, putative [Ricinus communis]
          Length = 367

 Score =  230 bits (587), Expect = 8e-59
 Identities = 113/139 (81%), Positives = 120/139 (86%)
 Frame = -3

Query: 419 NRTSTDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQXXXXXXXXXXXXXXXXGQLMS 240
           NRTS++DIKSLRLITAIKTPYLPDGRFDLEAYDAL+NMQ                GQLMS
Sbjct: 58  NRTSSEDIKSLRLITAIKTPYLPDGRFDLEAYDALLNMQIVNGAEGVIVGGTTGEGQLMS 117

Query: 239 WDEHIMLIGHTINCFGTSIKVIGNTGSNSTREAVHATEQGFAVGMHAALHINPYYGKTSL 60
           WDEHIMLIGHT+NCFG SIKVIGNTGSNSTREA+HATEQGFAVGMHAALHINPYYGKTSL
Sbjct: 118 WDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSL 177

Query: 59  EGMVAHFQCVLPMGPTIIY 3
           EG+V+HF  VLPMGPTIIY
Sbjct: 178 EGLVSHFDSVLPMGPTIIY 196


>ref|XP_002320068.1| predicted protein [Populus trichocarpa] gi|222860841|gb|EEE98383.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  229 bits (583), Expect = 2e-58
 Identities = 112/139 (80%), Positives = 119/139 (85%)
 Frame = -3

Query: 419 NRTSTDDIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQXXXXXXXXXXXXXXXXGQLMS 240
           N TS +D+KSLRLITAIKTPYLPDGRFDLEAYDALVNMQ                GQLMS
Sbjct: 53  NMTSAEDMKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIANGAEGVVVGGTTGEGQLMS 112

Query: 239 WDEHIMLIGHTINCFGTSIKVIGNTGSNSTREAVHATEQGFAVGMHAALHINPYYGKTSL 60
           WDEHIMLIGHT+NCFG+SIKVIGNTGSNSTREA+HATEQGFAVGMHAALHINPYYGKTS+
Sbjct: 113 WDEHIMLIGHTVNCFGSSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSV 172

Query: 59  EGMVAHFQCVLPMGPTIIY 3
           EGMV+HF  VLPMGPTIIY
Sbjct: 173 EGMVSHFDSVLPMGPTIIY 191


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