BLASTX nr result

ID: Atractylodes21_contig00017156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017156
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc...    84   1e-14
ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like...    80   2e-13
dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare]     79   4e-13
gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis tha...    77   1e-12
ref|NP_001031991.1| DNA repair endonuclease UVH1 [Arabidopsis th...    77   1e-12

>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
           gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
           [Medicago truncatula]
          Length = 984

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/83 (51%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = +1

Query: 13  TNGNSSIILEEVLEEAPKWKXXXXXXXXXXXXXXKSS---DECVVESAQDDNGIVLVACK 183
           T+ N  I+LEEVLEEAPKWK              K     +E + E    DNGIVLVACK
Sbjct: 371 TSSNHGIVLEEVLEEAPKWKVLRDILEEVEEERRKQGILREEVLAEGEDTDNGIVLVACK 430

Query: 184 DEHSCVQLEECITGSPNQVMRGE 252
           DE SC+QLEECIT +P +VM+ E
Sbjct: 431 DERSCLQLEECITNNPKKVMQDE 453


>ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
          Length = 967

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
 Frame = +1

Query: 13  TNGNSSIILEEVLEEAPKWKXXXXXXXXXXXXXXKSS---DECVVESAQDDNGIVLVACK 183
           ++ N+ +ILEEVLEEAPKWK              K     +E + E    +NGIVLVACK
Sbjct: 371 SSSNAGLILEEVLEEAPKWKVLRNVLEEVEEERQKQGMLREEVLAEGEDTNNGIVLVACK 430

Query: 184 DEHSCVQLEECITGSPNQVMRGE 252
           DE SC+QLEECIT  P +VM  E
Sbjct: 431 DERSCLQLEECITNGPKKVMHEE 453


>dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 998

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/84 (51%), Positives = 51/84 (60%)
 Frame = +1

Query: 1   DSLVTNGNSSIILEEVLEEAPKWKXXXXXXXXXXXXXXKSSDECVVESAQDDNGIVLVAC 180
           D+   N  +S +LEEVLEEAPKWK              K  D  V E   ++ GIVLVAC
Sbjct: 389 DAQKVNAEASFLLEEVLEEAPKWKVLRELLQEIAEEQRKG-DAVVHEDENNECGIVLVAC 447

Query: 181 KDEHSCVQLEECITGSPNQVMRGE 252
           KDE SC+QL+ECI  SP+QVMR E
Sbjct: 448 KDERSCLQLQECILRSPHQVMREE 471


>gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis thaliana]
          Length = 956

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/80 (50%), Positives = 50/80 (62%)
 Frame = +1

Query: 13  TNGNSSIILEEVLEEAPKWKXXXXXXXXXXXXXXKSSDECVVESAQDDNGIVLVACKDEH 192
           TN  + +++EEVLEEAPKWK              K +     E   D+NGIVLVACKDE 
Sbjct: 370 TNVATGVVVEEVLEEAPKWKVLREILEETQEERLKQAFS--EEDNSDNNGIVLVACKDER 427

Query: 193 SCVQLEECITGSPNQVMRGE 252
           SC+QLE+CIT +P +VMR E
Sbjct: 428 SCMQLEDCITNNPQKVMREE 447


>ref|NP_001031991.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
           gi|332007265|gb|AED94648.1| DNA repair endonuclease UVH1
           [Arabidopsis thaliana]
          Length = 689

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/80 (50%), Positives = 50/80 (62%)
 Frame = +1

Query: 13  TNGNSSIILEEVLEEAPKWKXXXXXXXXXXXXXXKSSDECVVESAQDDNGIVLVACKDEH 192
           TN  + +++EEVLEEAPKWK              K +     E   D+NGIVLVACKDE 
Sbjct: 370 TNVATGVVVEEVLEEAPKWKVLREILEETQEERLKQAFS--EEDNSDNNGIVLVACKDER 427

Query: 193 SCVQLEECITGSPNQVMRGE 252
           SC+QLE+CIT +P +VMR E
Sbjct: 428 SCMQLEDCITNNPQKVMREE 447


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