BLASTX nr result

ID: Atractylodes21_contig00017134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017134
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302675.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...    81   1e-13
ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple...    81   1e-13
ref|XP_002515075.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana] ...    78   9e-13

>ref|XP_002302675.1| predicted protein [Populus trichocarpa] gi|222844401|gb|EEE81948.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/60 (68%), Positives = 49/60 (81%)
 Frame = -1

Query: 180 EEEEAFNXXXXSVKFGTPEALEHVQNLTDVGAMTRLLHECIAYQRGLDLQLENILSLRPD 1
           ++E+       S+KFGTPEAL+HV+NLTDVGAMTRLLHECIAYQRGLDL L+ +LS R D
Sbjct: 27  QQEDETTLNSPSIKFGTPEALDHVRNLTDVGAMTRLLHECIAYQRGLDLNLDTLLSQRSD 86


>ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
           subunit 4-like [Cucumis sativus]
          Length = 751

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
 Frame = -1

Query: 204 MASSP--SVTE-EEEAFNXXXXSVKFGTPEALEHVQNLTDVGAMTRLLHECIAYQRGLDL 34
           MAS+P  S+T  E++       S+KFG+ EALEH++ LTDVGAMTRLLHECIAYQR LDL
Sbjct: 1   MASTPTGSITAIEDDHHLDHQDSIKFGSTEALEHIRTLTDVGAMTRLLHECIAYQRALDL 60

Query: 33  QLENILSLRPD 1
            L+N+LS R D
Sbjct: 61  NLDNLLSQRSD 71


>ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
           [Cucumis sativus]
          Length = 751

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
 Frame = -1

Query: 204 MASSP--SVTE-EEEAFNXXXXSVKFGTPEALEHVQNLTDVGAMTRLLHECIAYQRGLDL 34
           MAS+P  S+T  E++       S+KFG+ EALEH++ LTDVGAMTRLLHECIAYQR LDL
Sbjct: 1   MASTPTGSITAIEDDHHLDHQDSIKFGSTEALEHIRTLTDVGAMTRLLHECIAYQRALDL 60

Query: 33  QLENILSLRPD 1
            L+N+LS R D
Sbjct: 61  NLDNLLSQRSD 71


>ref|XP_002515075.1| conserved hypothetical protein [Ricinus communis]
           gi|223545555|gb|EEF47059.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 746

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/48 (77%), Positives = 43/48 (89%)
 Frame = -1

Query: 144 VKFGTPEALEHVQNLTDVGAMTRLLHECIAYQRGLDLQLENILSLRPD 1
           +KFGT EAL+HV+NLTDVGAMTRLLHECIAYQR LDL L+N+L+ R D
Sbjct: 25  IKFGTREALDHVRNLTDVGAMTRLLHECIAYQRALDLDLDNLLAQRTD 72


>ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
           gi|332656619|gb|AEE82019.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1110

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -1

Query: 267 ERISSTTTLLGISANNSGE*VMASSPSVTEEEEAFNXXXXS-VKFGTPEALEHVQNLTDV 91
           E I+  T ++ +   N         P + +++ A      S VKFGTPEALE+V++LTDV
Sbjct: 355 EEITGDTRIVDVGIENK------KMPEIEQDDAAAETVDSSTVKFGTPEALEYVRSLTDV 408

Query: 90  GAMTRLLHECIAYQRGLDLQLENILSLRPD 1
           GAMTRLLHECIAYQR LD  L+ +LS R +
Sbjct: 409 GAMTRLLHECIAYQRSLDSDLDTLLSQRTE 438


Top