BLASTX nr result

ID: Atractylodes21_contig00017101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017101
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra...   194   8e-48
ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II tra...   192   2e-47
ref|XP_002531587.1| Cofactor required for Sp1 transcriptional ac...   186   1e-45
ref|NP_001241256.1| uncharacterized protein LOC100792250 [Glycin...   186   2e-45

>ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Cucumis sativus]
          Length = 168

 Score =  194 bits (492), Expect = 8e-48
 Identities = 97/126 (76%), Positives = 108/126 (85%)
 Frame = -1

Query: 380 MATATXXXXXXXYKLYKDYEQNXXXXXXXXXPIQGTYLLYGSNYTTDDVLPTLEDQGVRQ 201
           MATAT       YKLYKDY Q+         PI+GTY+ +GSNYTTDDVLP+LE+QGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 200 LYPKGPNVDFKKELRSLNRELQLHILELADVLIERPSQYARRVEDISLIFKNLHHLLNSL 21
           LYP+GPNVD+KKELRSLNRELQLHILELAD+L+ERPSQYARRVE+ISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 20  RPHQAR 3
           RPHQAR
Sbjct: 121 RPHQAR 126


>ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|222867982|gb|EEF05113.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  193 bits (490), Expect = 1e-47
 Identities = 98/126 (77%), Positives = 107/126 (84%)
 Frame = -1

Query: 380 MATATXXXXXXXYKLYKDYEQNXXXXXXXXXPIQGTYLLYGSNYTTDDVLPTLEDQGVRQ 201
           MATAT       Y+LYKDY +N         PI+GTY+ + S+YTTDDVLP+LE+QGVRQ
Sbjct: 1   MATATFPPPPPFYRLYKDYIENPKSAPEPPPPIEGTYVCFASSYTTDDVLPSLEEQGVRQ 60

Query: 200 LYPKGPNVDFKKELRSLNRELQLHILELADVLIERPSQYARRVEDISLIFKNLHHLLNSL 21
           LYPKGPNVDFKKELRSLNRELQLHILELADVL+ERPSQYARRVEDISLIFKNLHHLLNSL
Sbjct: 61  LYPKGPNVDFKKELRSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSL 120

Query: 20  RPHQAR 3
           RPHQAR
Sbjct: 121 RPHQAR 126


>ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7
           [Vitis vinifera] gi|297739781|emb|CBI29963.3| unnamed
           protein product [Vitis vinifera]
          Length = 168

 Score =  192 bits (488), Expect = 2e-47
 Identities = 98/126 (77%), Positives = 106/126 (84%)
 Frame = -1

Query: 380 MATATXXXXXXXYKLYKDYEQNXXXXXXXXXPIQGTYLLYGSNYTTDDVLPTLEDQGVRQ 201
           MATAT       Y+LYKDY QN         PI+GTY L+G+ YTTDDVLP+LE+QGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYIQNPKSAPEPPPPIEGTYALFGATYTTDDVLPSLEEQGVRQ 60

Query: 200 LYPKGPNVDFKKELRSLNRELQLHILELADVLIERPSQYARRVEDISLIFKNLHHLLNSL 21
           LYPKG NVDFKKELRSLNRELQLH+LELADVL+ERPSQYARRVEDISLIFKNLHHLLNSL
Sbjct: 61  LYPKGSNVDFKKELRSLNRELQLHLLELADVLVERPSQYARRVEDISLIFKNLHHLLNSL 120

Query: 20  RPHQAR 3
           RPHQAR
Sbjct: 121 RPHQAR 126


>ref|XP_002531587.1| Cofactor required for Sp1 transcriptional activation subunit,
           putative [Ricinus communis] gi|223528783|gb|EEF30790.1|
           Cofactor required for Sp1 transcriptional activation
           subunit, putative [Ricinus communis]
          Length = 168

 Score =  186 bits (473), Expect = 1e-45
 Identities = 95/126 (75%), Positives = 104/126 (82%)
 Frame = -1

Query: 380 MATATXXXXXXXYKLYKDYEQNXXXXXXXXXPIQGTYLLYGSNYTTDDVLPTLEDQGVRQ 201
           MATA        Y+LYKDY +N         PI GTY  +G+NYTT+ VLP+LE+QGVRQ
Sbjct: 1   MATAAYPPPPPYYRLYKDYIENPKSAPEPPPPIDGTYTCFGANYTTEYVLPSLEEQGVRQ 60

Query: 200 LYPKGPNVDFKKELRSLNRELQLHILELADVLIERPSQYARRVEDISLIFKNLHHLLNSL 21
           LYPKGPNVDFKKELRSLNRELQLHILEL+DVL+ERPSQYARRVEDISLIFKNLHHLLNSL
Sbjct: 61  LYPKGPNVDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSL 120

Query: 20  RPHQAR 3
           RPHQAR
Sbjct: 121 RPHQAR 126


>ref|NP_001241256.1| uncharacterized protein LOC100792250 [Glycine max]
           gi|255645739|gb|ACU23363.1| unknown [Glycine max]
          Length = 168

 Score =  186 bits (471), Expect = 2e-45
 Identities = 94/126 (74%), Positives = 104/126 (82%)
 Frame = -1

Query: 380 MATATXXXXXXXYKLYKDYEQNXXXXXXXXXPIQGTYLLYGSNYTTDDVLPTLEDQGVRQ 201
           MATAT       Y+LYKDY Q+         PI+GTYL +G+NYTT DVLPTLE+QGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYLQDPNSAPDPPPPIEGTYLCFGANYTTSDVLPTLEEQGVRQ 60

Query: 200 LYPKGPNVDFKKELRSLNRELQLHILELADVLIERPSQYARRVEDISLIFKNLHHLLNSL 21
           LY KGPNVDFKKELRSLN ELQLH+LELAD+LIERPSQYARRVE+IS +FKNLHHLLNSL
Sbjct: 61  LYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTVFKNLHHLLNSL 120

Query: 20  RPHQAR 3
           RPHQAR
Sbjct: 121 RPHQAR 126


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