BLASTX nr result

ID: Atractylodes21_contig00017097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017097
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21655.3| unnamed protein product [Vitis vinifera]              160   4e-37
ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog ...   147   5e-33
ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp....   124   2e-26
ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog ...   124   2e-26
ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidop...   124   3e-26

>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  160 bits (405), Expect = 4e-37
 Identities = 88/182 (48%), Positives = 117/182 (64%), Gaps = 11/182 (6%)
 Frame = +2

Query: 2   FEFLAALKVLHYKLEKARKADGSGVHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQS 181
           FEFLA LK L Y+L++AR+  G   H LMID+IGAF+W+DR  +SL   + +RK LSLQS
Sbjct: 140 FEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRASTSLHLESNSRKRLSLQS 199

Query: 182 VLETVVQEIKKXXXXXXXXXXATKTV-------TNQVKSSYSNWASGAASE-ANIGKGWS 337
           + ETVV+EI+K          ATK         TN+VK +    +S   S    +  G  
Sbjct: 200 ISETVVEEIRKLLLVHPMLVLATKATILGDTYSTNEVKRTSMKLSSNDPSNLRTVTGGPQ 259

Query: 338 KNTYREYMPSIWQSFVTHRILVRASDDE---RKLQDRDCYLAEWLLPALNLSDEFAVGEA 508
           K +YRE+MP +WQSFVTHRILVRA+DD+    K Q R  +L+EWL+P+LN SD+F V +A
Sbjct: 260 KLSYREFMPLVWQSFVTHRILVRAADDDPANSKYQSRSIFLSEWLMPSLNFSDKFIVRDA 319

Query: 509 GI 514
           G+
Sbjct: 320 GV 321


>ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog [Glycine max]
          Length = 310

 Score =  147 bits (370), Expect = 5e-33
 Identities = 84/178 (47%), Positives = 105/178 (58%), Gaps = 7/178 (3%)
 Frame = +2

Query: 2   FEFLAALKVLHYKLEKARKADGSGVHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQS 181
           FEFL  L+ LH +LEK ++  G GVH+LMID+IGAFHW+DR    L Q    +K L LQ+
Sbjct: 129 FEFLHTLRTLHCRLEKEKEVHGVGVHLLMIDSIGAFHWMDRASMFLSQRENRKKKLFLQT 188

Query: 182 VLETVVQEIKKXXXXXXXXXXATKTVT-NQVKSSYSNWASGAASE---ANIGKGWSKNTY 349
           V E VVQ IKK          ATK+V      S+ SN   G   E    N+ +      Y
Sbjct: 189 VSEAVVQNIKKLLQVHPMLIIATKSVIFGNRYSTASNEVKGNMEERCSKNVTRNHQNYLY 248

Query: 350 REYMPSIWQSFVTHRILVRASDDE---RKLQDRDCYLAEWLLPALNLSDEFAVGEAGI 514
           REYMPS+WQSFVTHRILVR+SD+       Q+   YL EWLLP L+  D+  V +AG+
Sbjct: 249 REYMPSVWQSFVTHRILVRSSDEHPVTTNNQNSSFYLLEWLLPRLSFPDKIVVKDAGV 306


>ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310742|gb|EFH41166.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 389

 Score =  124 bits (312), Expect = 2e-26
 Identities = 78/181 (43%), Positives = 104/181 (57%), Gaps = 14/181 (7%)
 Frame = +2

Query: 5   EFLAALKVLHYKLEKARKADGSGVHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQSV 184
           E L++LK LHY++ + ++A GS V VLMID+IGAFHW DR  SSL     NRK+LSL +V
Sbjct: 162 ELLSSLKTLHYRIRQ-QEACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNV 220

Query: 185 LETVVQEIKKXXXXXXXXXXATKTV----------TNQVKSSYSNWASGAASEANIGKGW 334
           +E +VQE+KK          ATK             N+  SS  ++   AAS+A      
Sbjct: 221 VEMIVQELKKLLQVHSLVVLATKATIYEEKYPAIENNRKFSSNDDFPGNAASKA------ 274

Query: 335 SKNTYREYMPSIWQSFVTHRILVRASDDERKL----QDRDCYLAEWLLPALNLSDEFAVG 502
            +   RE+MPS WQ+FVTH+I++R S D R L    Q+   YL EWL P L+  D F V 
Sbjct: 275 QQPLIREFMPSSWQAFVTHKIIIRKSADHRSLQTGQQNLSAYLLEWLQPQLSSIDRFIVD 334

Query: 503 E 505
           +
Sbjct: 335 D 335


>ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog [Vitis vinifera]
          Length = 315

 Score =  124 bits (312), Expect = 2e-26
 Identities = 70/145 (48%), Positives = 91/145 (62%), Gaps = 8/145 (5%)
 Frame = +2

Query: 2   FEFLAALKVLHYKLEKARKADGSGVHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQS 181
           FEFLA LK L Y+L++AR+  G   H LMID+IGAF+W+DR  +SL   + +RK LSLQS
Sbjct: 155 FEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRASTSLHLESNSRKRLSLQS 214

Query: 182 VLETVVQEIKKXXXXXXXXXXATKTV-------TNQVKSSYSNWASGAASE-ANIGKGWS 337
           + ETVV+EI+K          ATK         TN+VK +    +S   S    +  G  
Sbjct: 215 ISETVVEEIRKLLLVHPMLVLATKATILGDTYSTNEVKRTSMKLSSNDPSNLRTVTGGPQ 274

Query: 338 KNTYREYMPSIWQSFVTHRILVRAS 412
           K +YRE+MP +WQSFVTHRILVRA+
Sbjct: 275 KLSYREFMPLVWQSFVTHRILVRAA 299


>ref|NP_851268.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|55583880|sp|Q682D3.2|XRCC2_ARATH RecName: Full=DNA
           repair protein XRCC2 homolog; AltName: Full=X-ray repair
           cross-complementing protein 2 homolog; Short=AtXRCC2
           gi|27524915|emb|CAD12880.1| putative X-ray repair
           cross-complementing protein 2 [Arabidopsis thaliana]
           gi|332010528|gb|AED97911.1| DNA repair protein
           XRCC2-like protein [Arabidopsis thaliana]
          Length = 372

 Score =  124 bits (311), Expect = 3e-26
 Identities = 78/186 (41%), Positives = 107/186 (57%), Gaps = 14/186 (7%)
 Frame = +2

Query: 5   EFLAALKVLHYKLEKARKADGSGVHVLMIDNIGAFHWIDRGFSSLPQGNPNRKNLSLQSV 184
           E L++LK LHY++++ ++A GS V VLMID+IGAFHW DR  SSL     NRK+LSL +V
Sbjct: 162 ELLSSLKTLHYRIQQ-QEACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNV 220

Query: 185 LETVVQEIKKXXXXXXXXXXATK----------TVTNQVKSSYSNWASGAASEANIGKGW 334
           +ET+VQE+KK          ATK             N+  SS  +++   AS+A      
Sbjct: 221 VETIVQELKKLLLVHSLVVLATKGTIYEEKYPANENNRKVSSNDHFSGNVASKA------ 274

Query: 335 SKNTYREYMPSIWQSFVTHRILVRASDDERKLQDRD----CYLAEWLLPALNLSDEFAVG 502
            +  +RE+MPS WQ+FVTH+I++R S D + LQ        Y  EWL P L+  D F V 
Sbjct: 275 QQPPFREFMPSSWQAFVTHKIIIRKSADYQSLQTGQQNLLAYSLEWLQPQLSRIDRFIVD 334

Query: 503 EAGILT 520
           +   LT
Sbjct: 335 DVRKLT 340


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