BLASTX nr result
ID: Atractylodes21_contig00017036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00017036
(1015 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 223 4e-56
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2... 214 4e-53
emb|CBI28414.3| unnamed protein product [Vitis vinifera] 212 1e-52
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 212 1e-52
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin... 170 6e-40
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein, putative
[Ricinus communis]
Length = 578
Score = 223 bits (569), Expect = 4e-56
Identities = 115/188 (61%), Positives = 135/188 (71%)
Frame = -2
Query: 1014 KFGPVHDVRIPCQQKRMFGFVTFVFEDTVRHILNKGNPHFVSGARVLVKPYREKSKADDR 835
KFGPV DVRIPCQQKRMFGFVTF+F +TV+ IL KGNPH+V GARVLVKPYREKS+ DR
Sbjct: 375 KFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGARVLVKPYREKSRLIDR 434
Query: 834 KHGEIFQYPMYQGAHCLDTELGLQSMPRICDNSRLLNKQLMDEQEQALEFERRRFSEMHL 655
K E Q+PMY +H +D + L MP I DNSRLL KQLM+E E ALEFERRR E HL
Sbjct: 435 KFSEKLQHPMYNSSHFIDGDSELHPMPTISDNSRLLRKQLMEENEHALEFERRRLLEFHL 494
Query: 654 AADPNNQLPCFGTSLEELRLSEGNGHAPQMDFPSTERFNYLLDVLNNGGPTGEETIRQIN 475
N G S++EL+LSE + +FPS ERFNYLLDVLNNG + E R+I+
Sbjct: 495 GPKSLNHQSYLGCSMDELKLSEEHA-----EFPSAERFNYLLDVLNNGS-SSEGKFRRIS 548
Query: 474 TKYNEQES 451
T YN+Q+S
Sbjct: 549 TNYNDQDS 556
>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
predicted protein [Populus trichocarpa]
Length = 554
Score = 214 bits (544), Expect = 4e-53
Identities = 112/188 (59%), Positives = 130/188 (69%)
Frame = -2
Query: 1014 KFGPVHDVRIPCQQKRMFGFVTFVFEDTVRHILNKGNPHFVSGARVLVKPYREKSKADDR 835
KFGPV DVRIPCQQKRMFGFVTFVF +TV+ IL+KGNPH V GARVLVKPYREKS+ DR
Sbjct: 349 KFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVKPYREKSRLVDR 408
Query: 834 KHGEIFQYPMYQGAHCLDTELGLQSMPRICDNSRLLNKQLMDEQEQALEFERRRFSEMHL 655
K+ E Q+P + H +D + L S+PR+CDNSRLL KQLM+E EQALE ERRR SE L
Sbjct: 409 KYAEKIQHPFFYSQHFIDGDSELHSVPRVCDNSRLLRKQLMEEHEQALELERRRLSEFQL 468
Query: 654 AADPNNQLPCFGTSLEELRLSEGNGHAPQMDFPSTERFNYLLDVLNNGGPTGEETIRQIN 475
A P + G S++E +LSE FPS E FNY DVLNNG T EE R
Sbjct: 469 APKPLARHAYHGHSMDEFKLSEEQAD----QFPSAEHFNYWFDVLNNGS-TSEEKHRHTR 523
Query: 474 TKYNEQES 451
T +EQ+S
Sbjct: 524 TNCSEQDS 531
>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 212 bits (539), Expect = 1e-52
Identities = 114/191 (59%), Positives = 133/191 (69%), Gaps = 3/191 (1%)
Frame = -2
Query: 1014 KFGPVHDVRIPCQQKRMFGFVTFVFEDTVRHILNKGNPHFVSGARVLVKPYREK--SKAD 841
KFGPV DVRIPCQQKRMFGFVTFVF +TV+ IL KGNPH++ GARVLVKPYREK S+
Sbjct: 324 KFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTV 383
Query: 840 DRKHGEIFQYPMYQGAHCLDTELGLQSMPRICDNSRLLNK-QLMDEQEQALEFERRRFSE 664
DR+ Q+PMY H +D + LQS+PR+CDNSRLL K QLM+E EQALE ERRR SE
Sbjct: 384 DRR-----QHPMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSE 438
Query: 663 MHLAADPNNQLPCFGTSLEELRLSEGNGHAPQMDFPSTERFNYLLDVLNNGGPTGEETIR 484
+ L P P FG S++E + HA Q +FPS ER NYLL+VLNNG T
Sbjct: 439 LQLT--PKTAHPYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEVLNNG-----STSE 491
Query: 483 QINTKYNEQES 451
+T YNEQES
Sbjct: 492 DRSTNYNEQES 502
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
vinifera]
Length = 572
Score = 212 bits (539), Expect = 1e-52
Identities = 114/191 (59%), Positives = 133/191 (69%), Gaps = 3/191 (1%)
Frame = -2
Query: 1014 KFGPVHDVRIPCQQKRMFGFVTFVFEDTVRHILNKGNPHFVSGARVLVKPYREK--SKAD 841
KFGPV DVRIPCQQKRMFGFVTFVF +TV+ IL KGNPH++ GARVLVKPYREK S+
Sbjct: 371 KFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTV 430
Query: 840 DRKHGEIFQYPMYQGAHCLDTELGLQSMPRICDNSRLLNK-QLMDEQEQALEFERRRFSE 664
DR+ Q+PMY H +D + LQS+PR+CDNSRLL K QLM+E EQALE ERRR SE
Sbjct: 431 DRR-----QHPMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSE 485
Query: 663 MHLAADPNNQLPCFGTSLEELRLSEGNGHAPQMDFPSTERFNYLLDVLNNGGPTGEETIR 484
+ L P P FG S++E + HA Q +FPS ER NYLL+VLNNG T
Sbjct: 486 LQLT--PKTAHPYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEVLNNG-----STSE 538
Query: 483 QINTKYNEQES 451
+T YNEQES
Sbjct: 539 DRSTNYNEQES 549
>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
product [Vitis vinifera]
Length = 544
Score = 170 bits (430), Expect = 6e-40
Identities = 96/189 (50%), Positives = 119/189 (62%), Gaps = 2/189 (1%)
Frame = -2
Query: 1011 FGPVHDVRIPCQQKRMFGFVTFVFEDTVRHILNKGNPHFVSGARVLVKPYREKSKADDRK 832
FG V DVRIPCQQKRMFGFVTF DTV+ IL KG+PH+V GARVLVKPYREK + DRK
Sbjct: 338 FGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRK 397
Query: 831 HGEIFQYPMYQGAHCLDTELGLQSMPRICDNSRLLNKQLMDEQE--QALEFERRRFSEMH 658
+ E F+ MY D + L MPR + SRLL KQ+M+EQE Q LEFE RR S++
Sbjct: 398 YLEKFESSMYYPLQYADMDSELHMMPRGMETSRLLRKQIMEEQEFAQDLEFETRRLSKLQ 457
Query: 657 LAADPNNQLPCFGTSLEELRLSEGNGHAPQMDFPSTERFNYLLDVLNNGGPTGEETIRQI 478
LA +P G SL+EL++ E HA FP+ NY LDV NNG + ++ R +
Sbjct: 458 LARNPLANQLHHGYSLDELKVLE--AHANHSKFPTVVHSNYPLDVSNNGSTSDDKPWRAV 515
Query: 477 NTKYNEQES 451
N + + S
Sbjct: 516 NNPIDHKSS 524