BLASTX nr result

ID: Atractylodes21_contig00017003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00017003
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF78276.1|AC020576_20 Contains similarity to formin binding ...    90   1e-15
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    79   2e-12
emb|CBI19367.3| unnamed protein product [Vitis vinifera]               79   2e-12
ref|XP_002522113.1| protein binding protein, putative [Ricinus c...    73   1e-10
ref|XP_001774266.1| predicted protein [Physcomitrella patens sub...    73   1e-10

>gb|AAF78276.1|AC020576_20 Contains similarity to formin binding protein 11 from Mus musculus
           gb|AF135439 and contains multiple FF PF|01846 and WW
           PF|00397 domains. EST gb|AI997587 comes from this gene
           [Arabidopsis thaliana]
          Length = 919

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 48/88 (54%), Positives = 56/88 (63%), Gaps = 18/88 (20%)
 Frame = +2

Query: 527 YRLEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRL----------------- 655
           Y  +YR+FLETC  IK  T+W K QDRLEDD+RCS LEKIDRL                 
Sbjct: 558 YMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRLIGFEEYILDLEKEEEEL 617

Query: 656 -EIFQVKESIAYQAVASNTSGSTPKDLF 736
             + ++K+   YQAVASNTSGSTPKDLF
Sbjct: 618 KRVEKLKDLPQYQAVASNTSGSTPKDLF 645


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +2

Query: 530 RLEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRLEIFQ 667
           R+EYRQFLE+C  IKV+++W K QDRLEDDERCS LEKIDRLEIFQ
Sbjct: 599 RMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ 644


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +2

Query: 530 RLEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRLEIFQ 667
           R+EYRQFLE+C  IKV+++W K QDRLEDDERCS LEKIDRLEIFQ
Sbjct: 609 RMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ 654


>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
           gi|223538712|gb|EEF40313.1| protein binding protein,
           putative [Ricinus communis]
          Length = 956

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +2

Query: 533 LEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRLEIFQ 667
           +EYRQFLE+C  IK  T+W K QDRLE DERCS LEKIDRLEIFQ
Sbjct: 540 MEYRQFLESCDFIKASTQWRKVQDRLEADERCSRLEKIDRLEIFQ 584


>ref|XP_001774266.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674393|gb|EDQ60902.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1182

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = +2

Query: 527 YRLEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRLEIFQ 667
           Y  EYR +LE CG IK  T+W K QDRLEDDERCS L+K+DRLE+FQ
Sbjct: 713 YIAEYRSYLENCGFIKATTQWRKVQDRLEDDERCSRLDKLDRLEVFQ 759


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