BLASTX nr result
ID: Atractylodes21_contig00017003
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00017003 (1039 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF78276.1|AC020576_20 Contains similarity to formin binding ... 90 1e-15 ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 79 2e-12 emb|CBI19367.3| unnamed protein product [Vitis vinifera] 79 2e-12 ref|XP_002522113.1| protein binding protein, putative [Ricinus c... 73 1e-10 ref|XP_001774266.1| predicted protein [Physcomitrella patens sub... 73 1e-10 >gb|AAF78276.1|AC020576_20 Contains similarity to formin binding protein 11 from Mus musculus gb|AF135439 and contains multiple FF PF|01846 and WW PF|00397 domains. EST gb|AI997587 comes from this gene [Arabidopsis thaliana] Length = 919 Score = 89.7 bits (221), Expect = 1e-15 Identities = 48/88 (54%), Positives = 56/88 (63%), Gaps = 18/88 (20%) Frame = +2 Query: 527 YRLEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRL----------------- 655 Y +YR+FLETC IK T+W K QDRLEDD+RCS LEKIDRL Sbjct: 558 YMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRLIGFEEYILDLEKEEEEL 617 Query: 656 -EIFQVKESIAYQAVASNTSGSTPKDLF 736 + ++K+ YQAVASNTSGSTPKDLF Sbjct: 618 KRVEKLKDLPQYQAVASNTSGSTPKDLF 645 >ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis vinifera] Length = 1020 Score = 78.6 bits (192), Expect = 2e-12 Identities = 36/46 (78%), Positives = 41/46 (89%) Frame = +2 Query: 530 RLEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRLEIFQ 667 R+EYRQFLE+C IKV+++W K QDRLEDDERCS LEKIDRLEIFQ Sbjct: 599 RMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ 644 >emb|CBI19367.3| unnamed protein product [Vitis vinifera] Length = 1030 Score = 78.6 bits (192), Expect = 2e-12 Identities = 36/46 (78%), Positives = 41/46 (89%) Frame = +2 Query: 530 RLEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRLEIFQ 667 R+EYRQFLE+C IKV+++W K QDRLEDDERCS LEKIDRLEIFQ Sbjct: 609 RMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ 654 >ref|XP_002522113.1| protein binding protein, putative [Ricinus communis] gi|223538712|gb|EEF40313.1| protein binding protein, putative [Ricinus communis] Length = 956 Score = 73.2 bits (178), Expect = 1e-10 Identities = 34/45 (75%), Positives = 37/45 (82%) Frame = +2 Query: 533 LEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRLEIFQ 667 +EYRQFLE+C IK T+W K QDRLE DERCS LEKIDRLEIFQ Sbjct: 540 MEYRQFLESCDFIKASTQWRKVQDRLEADERCSRLEKIDRLEIFQ 584 >ref|XP_001774266.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674393|gb|EDQ60902.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1182 Score = 73.2 bits (178), Expect = 1e-10 Identities = 32/47 (68%), Positives = 37/47 (78%) Frame = +2 Query: 527 YRLEYRQFLETCGLIKVDTRWWKAQDRLEDDERCSWLEKIDRLEIFQ 667 Y EYR +LE CG IK T+W K QDRLEDDERCS L+K+DRLE+FQ Sbjct: 713 YIAEYRSYLENCGFIKATTQWRKVQDRLEDDERCSRLDKLDRLEVFQ 759