BLASTX nr result

ID: Atractylodes21_contig00016998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016998
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...   126   2e-34
ref|XP_002526974.1| copine, putative [Ricinus communis] gi|22353...   129   5e-33
ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   121   2e-31
ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   124   2e-31
ref|XP_002511290.1| copine, putative [Ricinus communis] gi|22355...   123   3e-31

>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score =  126 bits (316), Expect(2) = 2e-34
 Identities = 67/106 (63%), Positives = 73/106 (68%)
 Frame = -3

Query: 319 YSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGSRSYNRXXXXXXXXXXXXXXXXXXX 140
           YSSL+QVTEALA AGLESSNLIVGIDFTKSNEWTG++S+N                    
Sbjct: 92  YSSLDQVTEALAHAGLESSNLIVGIDFTKSNEWTGAKSFN-------------------- 131

Query: 139 XXXXGSRSYNRKSLHHIGDALNPYEQAITIIGKTLAAFDEDNLIPC 2
                     RKSLHHIGD LNPY+QAI IIGKTLAAFD+DNLIPC
Sbjct: 132 ----------RKSLHHIGDGLNPYQQAIAIIGKTLAAFDDDNLIPC 167



 Score = 46.6 bits (109), Expect(2) = 2e-34
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = -1

Query: 444 THRPQKKLDRRYSRIADNYSSLEQV 370
           TH P+K+LDRRYSRIAD+YSSL+QV
Sbjct: 74  THEPKKRLDRRYSRIADDYSSLDQV 98


>ref|XP_002526974.1| copine, putative [Ricinus communis] gi|223533726|gb|EEF35461.1|
           copine, putative [Ricinus communis]
          Length = 461

 Score =  129 bits (324), Expect(2) = 5e-33
 Identities = 69/106 (65%), Positives = 74/106 (69%)
 Frame = -3

Query: 319 YSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGSRSYNRXXXXXXXXXXXXXXXXXXX 140
           Y SL+QVTEALA+AGLESSNLIVGIDFTKSNEWTG+RSY                     
Sbjct: 99  YKSLDQVTEALAQAGLESSNLIVGIDFTKSNEWTGARSY--------------------- 137

Query: 139 XXXXGSRSYNRKSLHHIGDALNPYEQAITIIGKTLAAFDEDNLIPC 2
                    NR+SLHHIGD LNPYEQAI+IIGKTLAAFDEDNLIPC
Sbjct: 138 ---------NRRSLHHIGDGLNPYEQAISIIGKTLAAFDEDNLIPC 174



 Score = 38.9 bits (89), Expect(2) = 5e-33
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -1

Query: 456 FGGQTHRPQKKLDRRYSRIADNYSSLEQV 370
           FGGQ    +++LDRRYSRIAD+Y SL+QV
Sbjct: 81  FGGQ----RRQLDRRYSRIADDYKSLDQV 105


>ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
           gi|296081383|emb|CBI16816.3| unnamed protein product
           [Vitis vinifera]
          Length = 442

 Score =  121 bits (304), Expect(2) = 2e-31
 Identities = 66/106 (62%), Positives = 72/106 (67%)
 Frame = -3

Query: 319 YSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGSRSYNRXXXXXXXXXXXXXXXXXXX 140
           Y+SL+QVT ALA+AGLESSNLIVGIDFTKSNEWTGSRS+                     
Sbjct: 79  YNSLDQVTAALAQAGLESSNLIVGIDFTKSNEWTGSRSF--------------------- 117

Query: 139 XXXXGSRSYNRKSLHHIGDALNPYEQAITIIGKTLAAFDEDNLIPC 2
                    NRKSLHHIG   NPYEQAI+IIGKTL+AFDEDNLIPC
Sbjct: 118 ---------NRKSLHHIGRGQNPYEQAISIIGKTLSAFDEDNLIPC 154



 Score = 41.2 bits (95), Expect(2) = 2e-31
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = -1

Query: 453 GGQTHRPQKKLDRRYSRIADNYSSLEQV 370
           G QT     +LDRRYSRIADNY+SL+QV
Sbjct: 58  GAQTPHRHPQLDRRYSRIADNYNSLDQV 85


>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score =  124 bits (311), Expect(2) = 2e-31
 Identities = 66/106 (62%), Positives = 74/106 (69%)
 Frame = -3

Query: 319 YSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGSRSYNRXXXXXXXXXXXXXXXXXXX 140
           Y+SLE+VTEALARAGLESSNLIVGIDFTKSNEWTG+                        
Sbjct: 76  YNSLEEVTEALARAGLESSNLIVGIDFTKSNEWTGA------------------------ 111

Query: 139 XXXXGSRSYNRKSLHHIGDALNPYEQAITIIGKTLAAFDEDNLIPC 2
                 RS+NR+SLHHIGD  NPY+QAI+IIGKTLAAFD+DNLIPC
Sbjct: 112 ------RSFNRRSLHHIGDQPNPYQQAISIIGKTLAAFDDDNLIPC 151



 Score = 38.1 bits (87), Expect(2) = 2e-31
 Identities = 16/20 (80%), Positives = 20/20 (100%)
 Frame = -1

Query: 429 KKLDRRYSRIADNYSSLEQV 370
           ++LDRRYSRIADNY+SLE+V
Sbjct: 63  RRLDRRYSRIADNYNSLEEV 82


>ref|XP_002511290.1| copine, putative [Ricinus communis] gi|223550405|gb|EEF51892.1|
           copine, putative [Ricinus communis]
          Length = 433

 Score =  123 bits (308), Expect(2) = 3e-31
 Identities = 65/106 (61%), Positives = 74/106 (69%)
 Frame = -3

Query: 319 YSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGSRSYNRXXXXXXXXXXXXXXXXXXX 140
           Y+SLEQVT+ALAR+GLESSNLIVGIDFTKSNEWTG+RS+                     
Sbjct: 69  YNSLEQVTDALARSGLESSNLIVGIDFTKSNEWTGARSF--------------------- 107

Query: 139 XXXXGSRSYNRKSLHHIGDALNPYEQAITIIGKTLAAFDEDNLIPC 2
                    NR+SLHHIGD  NPYEQAI+IIGKTL++FDEDNLIPC
Sbjct: 108 ---------NRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPC 144



 Score = 38.9 bits (89), Expect(2) = 3e-31
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = -1

Query: 456 FGGQTHRPQKKLDRRYSRIADNYSSLEQV 370
           +GGQ     ++L+R+YS+I DNY+SLEQV
Sbjct: 47  YGGQAPNSGRRLERKYSKIDDNYNSLEQV 75


Top