BLASTX nr result

ID: Atractylodes21_contig00016969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016969
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containi...   176   3e-42
ref|XP_002518995.1| GTP-binding  protein alpha subunit, gna, put...   169   3e-40
ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containi...   164   6e-39
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi...   161   5e-38
ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containi...   160   9e-38

>ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera] gi|297742017|emb|CBI33804.3| unnamed
           protein product [Vitis vinifera]
          Length = 605

 Score =  176 bits (445), Expect = 3e-42
 Identities = 85/154 (55%), Positives = 106/154 (68%)
 Frame = +1

Query: 76  MAGTSIHQNLFLPQPQHDHHHRNAIDFSSREQECISLLKKCKSMQELKQSHCLILKLGLV 255
           M  TS+     +   + D      + F   E+EC+SLLKKC +M+E KQSH  ILKLGL 
Sbjct: 1   MIRTSVLHQTHVLVSREDPPQSPELSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGLF 60

Query: 256 WSSFCTGNLISTCALSDFGSMDYACLIFSQIDSPNSFEYNTMIRGHIKDMNLEEAIKLYD 435
             SFC  NL++TCALSD+GSMDYAC IF Q+D   SF++NTM+RGH+KDMN EEA+  Y 
Sbjct: 61  GDSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYK 120

Query: 436 RMLVMGVQPNNFTYPSLLKGCAYLRRLEEGMQFH 537
            M   GV+P+NFTYP+LLK CA L  +EEGMQ H
Sbjct: 121 EMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 154


>ref|XP_002518995.1| GTP-binding  protein alpha subunit, gna, putative [Ricinus communis]
            gi|223541982|gb|EEF43528.1| GTP-binding protein alpha
            subunit, gna, putative [Ricinus communis]
          Length = 1203

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/154 (50%), Positives = 105/154 (68%)
 Frame = +1

Query: 76   MAGTSIHQNLFLPQPQHDHHHRNAIDFSSREQECISLLKKCKSMQELKQSHCLILKLGLV 255
            M GT++   + +  P  D      +    +EQEC+SLLK+C++M+E +Q+H  ILK G  
Sbjct: 862  MIGTTVLHQIHILLPPEDPSESPEVSLRVKEQECLSLLKRCQNMEEFRQAHAQILKWGFF 921

Query: 256  WSSFCTGNLISTCALSDFGSMDYACLIFSQIDSPNSFEYNTMIRGHIKDMNLEEAIKLYD 435
             + FC  NL++TCALS +GSMDYAC IF QID P SFEYNTMI+G++ D  +E A+ LY 
Sbjct: 922  SNPFCASNLVATCALSHWGSMDYACSIFRQIDQPGSFEYNTMIKGYVSDFKMENALLLYY 981

Query: 436  RMLVMGVQPNNFTYPSLLKGCAYLRRLEEGMQFH 537
             ML   VQ +NFTYP+L+K CA+LR ++E MQ H
Sbjct: 982  EMLEKEVQSDNFTYPALIKACAWLRAIDESMQIH 1015


>ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  164 bits (416), Expect = 6e-39
 Identities = 81/154 (52%), Positives = 108/154 (70%)
 Frame = +1

Query: 76  MAGTSIHQNLFLPQPQHDHHHRNAIDFSSREQECISLLKKCKSMQELKQSHCLILKLGLV 255
           M+GTS+     L    +     + ++    EQ  +SLLK+CKSM+E KQ H  ILKLGL 
Sbjct: 1   MSGTSVLCQSHLLSLPNSPPQSSELNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLF 60

Query: 256 WSSFCTGNLISTCALSDFGSMDYACLIFSQIDSPNSFEYNTMIRGHIKDMNLEEAIKLYD 435
           + SFC  NL+++CALS +GSM+YAC IFSQI+ P SFEYNTMIRG++  M+LEEA+ LY 
Sbjct: 61  YDSFCGSNLVASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYV 120

Query: 436 RMLVMGVQPNNFTYPSLLKGCAYLRRLEEGMQFH 537
            ML  G++P+NFTYP +LK C+ L  L+EG+Q H
Sbjct: 121 EMLERGIEPDNFTYPFVLKACSLLVALKEGVQIH 154


>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score =  161 bits (408), Expect = 5e-38
 Identities = 75/120 (62%), Positives = 94/120 (78%)
 Frame = +1

Query: 178 ISLLKKCKSMQELKQSHCLILKLGLVWSSFCTGNLISTCALSDFGSMDYACLIFSQIDSP 357
           +SLLK+CKSM+E KQ H  ILKLGL + SFC  NL++TCALS +GSM+YAC IF QI+ P
Sbjct: 34  LSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEP 93

Query: 358 NSFEYNTMIRGHIKDMNLEEAIKLYDRMLVMGVQPNNFTYPSLLKGCAYLRRLEEGMQFH 537
            SFEYNTMIRG++  MNLEEA+ LY  ML  G++P+NFTYP +LK C+ L  L+EG+Q H
Sbjct: 94  GSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIH 153


>ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  160 bits (406), Expect = 9e-38
 Identities = 79/154 (51%), Positives = 107/154 (69%)
 Frame = +1

Query: 76  MAGTSIHQNLFLPQPQHDHHHRNAIDFSSREQECISLLKKCKSMQELKQSHCLILKLGLV 255
           M+GTS+     L    +     + ++    EQ  +SLLK+CKSM+E K+ H  ILKLGL 
Sbjct: 1   MSGTSVLCQSHLLSLPNSPLQSSELNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLF 60

Query: 256 WSSFCTGNLISTCALSDFGSMDYACLIFSQIDSPNSFEYNTMIRGHIKDMNLEEAIKLYD 435
           + SFC  NL+++CALS +GSM+YAC IF QI+ P SFEYNTMIRG++  M+LEEA+ LY 
Sbjct: 61  YDSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYV 120

Query: 436 RMLVMGVQPNNFTYPSLLKGCAYLRRLEEGMQFH 537
            ML  G++P+NFTYP +LK C+ L  L+EG+Q H
Sbjct: 121 EMLERGIEPDNFTYPFVLKACSLLVALKEGVQIH 154


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