BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016945
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   334   1e-89
ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|2...   329   3e-88
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li...   320   2e-86
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   322   6e-86
ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-li...   321   1e-85

>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
           gi|302141794|emb|CBI18997.3| unnamed protein product
           [Vitis vinifera]
          Length = 360

 Score =  334 bits (857), Expect = 1e-89
 Identities = 164/178 (92%), Positives = 174/178 (97%)
 Frame = +2

Query: 266 PPHTKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGKTSTILAV 445
           PP  KATPWVEK+RPQSLADVAAHRDI+DTIDRLTSEN++PHLLLYGPPGTGKTSTILAV
Sbjct: 31  PPDRKATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAV 90

Query: 446 ARKLFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMT 625
           ARKL+G Q HNM+LELNASD+RGIDVVRQQIQDFASTQSFSFGAK+SVKLVLLDEADAMT
Sbjct: 91  ARKLYGEQFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKSSVKLVLLDEADAMT 150

Query: 626 KDAQFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTERLKHV 799
           KDAQFALRRVIE+YTKNTRFALICN+VNKIIPALQSRCTRFRFAPLDAVHVTERLKHV
Sbjct: 151 KDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHV 208


>ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|222843952|gb|EEE81499.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  329 bits (843), Expect(2) = 3e-88
 Identities = 163/180 (90%), Positives = 174/180 (96%)
 Frame = +2

Query: 260 APPPHTKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGKTSTIL 439
           A PP  KATPWVEK+RPQSLADVAAHRDIIDTIDRLTSEN++PHLLLYGPPGTGKTSTIL
Sbjct: 32  ATPPGGKATPWVEKYRPQSLADVAAHRDIIDTIDRLTSENRLPHLLLYGPPGTGKTSTIL 91

Query: 440 AVARKLFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADA 619
           AVARKL+G+Q HNM+LELNASD+RGIDVVR+QIQDFASTQSFSFGAKASVKLVLLDEADA
Sbjct: 92  AVARKLYGAQYHNMILELNASDDRGIDVVRKQIQDFASTQSFSFGAKASVKLVLLDEADA 151

Query: 620 MTKDAQFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTERLKHV 799
           MTKDAQFALRRVIE+YTKNTRFALICN+VNKIIPALQSRCTRFRFAPLD +HV ERLKHV
Sbjct: 152 MTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPMHVGERLKHV 211



 Score = 23.1 bits (48), Expect(2) = 3e-88
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 138 MAEVISLMDVD-DPNPSQGPNGNKG 209
           MAE I+LMD+D + N +     NKG
Sbjct: 1   MAEAIALMDIDEEENQNHLSKPNKG 25


>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
           gi|449499057|ref|XP_004160708.1| PREDICTED: replication
           factor C subunit 5-like [Cucumis sativus]
          Length = 363

 Score =  320 bits (820), Expect(2) = 2e-86
 Identities = 158/180 (87%), Positives = 171/180 (95%)
 Frame = +2

Query: 260 APPPHTKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGKTSTIL 439
           A  P  KA PWVEKFRP+SLADVAAHRDI+DTID+LTSEN++PHLLLYGPPGTGKTSTIL
Sbjct: 32  AAAPEGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTIL 91

Query: 440 AVARKLFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADA 619
           AVARKL+G+  HNM+LELNASD+RGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADA
Sbjct: 92  AVARKLYGTNYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADA 151

Query: 620 MTKDAQFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTERLKHV 799
           MTKDAQFALRRVIE+YTKNTRFALICN+VNKIIPALQSRCTRFRFAPLD  HVTERL++V
Sbjct: 152 MTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYV 211



 Score = 25.8 bits (55), Expect(2) = 2e-86
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +3

Query: 138 MAEVISLMDVDDPN 179
           M+EVIS+MD+DD N
Sbjct: 1   MSEVISVMDIDDDN 14


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540562|gb|EEF42129.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 360

 Score =  322 bits (825), Expect = 6e-86
 Identities = 157/175 (89%), Positives = 171/175 (97%)
 Frame = +2

Query: 275 TKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGKTSTILAVARK 454
           TKATPWVEK+RPQSLADVAAHRDI+DTIDRLT+EN++PHLLLYGPPGTGKTSTILAVARK
Sbjct: 34  TKATPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARK 93

Query: 455 LFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDA 634
           L+G Q HNM+LELNASD+RGIDVVRQQIQDFASTQSFSF AK++VKLVLLDEADAMTKDA
Sbjct: 94  LYGVQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFDAKSAVKLVLLDEADAMTKDA 153

Query: 635 QFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTERLKHV 799
           QFALRRVIE+YTKNTRFALICN+VNKIIPALQSRCTRFRFAPLD +HVT+RLKHV
Sbjct: 154 QFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPIHVTDRLKHV 208


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 361

 Score =  321 bits (823), Expect = 1e-85
 Identities = 159/181 (87%), Positives = 171/181 (94%)
 Frame = +2

Query: 257 GAPPPHTKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGKTSTI 436
           G PP   KA PWVEK+RPQSL DVAAHRDI+DTIDRLT+EN++PHLLLYGPPGTGKTSTI
Sbjct: 29  GNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTI 88

Query: 437 LAVARKLFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEAD 616
           LAVARKL+GSQ  NM+LELNASD+RGIDVVRQQIQDFASTQS SFG K+SVKLVLLDEAD
Sbjct: 89  LAVARKLYGSQYQNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEAD 148

Query: 617 AMTKDAQFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTERLKH 796
           AMTKDAQFALRRVIE+YTK+TRFALICN+VNKIIPALQSRCTRFRFAPLDAVHVTERLKH
Sbjct: 149 AMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKH 208

Query: 797 V 799
           V
Sbjct: 209 V 209