BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016844
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   152   4e-35
ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana] gi|...   148   5e-34
ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin...   147   9e-34
ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   146   1e-33
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              146   1e-33

>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 69  MINGRLNNGDRSGNLVLDIYPISSYYFSSKRAIAYKDETLADRALRLKANYDAHGMRTCV 248
           ++N   +   R    VLDIYP+S YYF SK  + ++DETL DR  R+K+NY AHG+RTCV
Sbjct: 7   VVNNNHHEASRDQGFVLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCV 66

Query: 249 EAVILVELFKHPHLLLLQAKNCIYKLPGGRLRPGESDVSGLKRKLS 386
           EAVILVELFKHPHLLLLQ KN I+KLPGGR+RPGESD+ GLKRKLS
Sbjct: 67  EAVILVELFKHPHLLLLQIKNSIFKLPGGRIRPGESDIGGLKRKLS 112


>ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
           gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60
           [Arabidopsis thaliana] gi|20147173|gb|AAM10303.1|
           AT4g29820/F27B13_60 [Arabidopsis thaliana]
           gi|21554114|gb|AAM63194.1| mRNA cleavage factor
           subunit-like protein [Arabidopsis thaliana]
           gi|332660282|gb|AEE85682.1| CFIM-25-like protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/107 (63%), Positives = 87/107 (81%)
 Frame = +3

Query: 66  EMINGRLNNGDRSGNLVLDIYPISSYYFSSKRAIAYKDETLADRALRLKANYDAHGMRTC 245
           E+ +      D   +L++D+YP+SSYYF SK A+  KDE ++DR +RLK+NY AHG+RTC
Sbjct: 12  EISDNTTRRNDVVHDLMVDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTC 71

Query: 246 VEAVILVELFKHPHLLLLQAKNCIYKLPGGRLRPGESDVSGLKRKLS 386
           VEAV+LVELFKHPH+LLLQ +N I+KLPGGRLRPGESD+ GLKRKL+
Sbjct: 72  VEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKLA 118


>ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
           gi|255640824|gb|ACU20695.1| unknown [Glycine max]
          Length = 216

 Score =  147 bits (371), Expect = 9e-34
 Identities = 71/100 (71%), Positives = 82/100 (82%)
 Frame = +3

Query: 87  NNGDRSGNLVLDIYPISSYYFSSKRAIAYKDETLADRALRLKANYDAHGMRTCVEAVILV 266
           N+G+   +L  DIYP+SSYYF SK A+  KD TL DR LR+K+NY A G+RTCVEAV+LV
Sbjct: 18  NSGNDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLV 77

Query: 267 ELFKHPHLLLLQAKNCIYKLPGGRLRPGESDVSGLKRKLS 386
           ELFKHPHLLLLQ +N IYKLPGGRLRPGESD  GLKRKL+
Sbjct: 78  ELFKHPHLLLLQIRNSIYKLPGGRLRPGESDTDGLKRKLA 117


>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  146 bits (369), Expect = 1e-33
 Identities = 77/118 (65%), Positives = 88/118 (74%), Gaps = 5/118 (4%)
 Frame = +3

Query: 48  IFTKQMEMINGRLNNGDRSG-----NLVLDIYPISSYYFSSKRAIAYKDETLADRALRLK 212
           IF    EM  G   +GDRS      N VLDIYP+S YYF SK  +  K+ETLADR LR+K
Sbjct: 65  IFRMNYEM--GSSADGDRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMK 122

Query: 213 ANYDAHGMRTCVEAVILVELFKHPHLLLLQAKNCIYKLPGGRLRPGESDVSGLKRKLS 386
           +NY  +G RTCV AVILVELFKHPHLLLLQ KN  +KLPGGRLRPGES+++GLKRKLS
Sbjct: 123 SNYSRYGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLS 180


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  146 bits (369), Expect = 1e-33
 Identities = 77/118 (65%), Positives = 88/118 (74%), Gaps = 5/118 (4%)
 Frame = +3

Query: 48  IFTKQMEMINGRLNNGDRSG-----NLVLDIYPISSYYFSSKRAIAYKDETLADRALRLK 212
           IF    EM  G   +GDRS      N VLDIYP+S YYF SK  +  K+ETLADR LR+K
Sbjct: 72  IFRMNYEM--GSSADGDRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMK 129

Query: 213 ANYDAHGMRTCVEAVILVELFKHPHLLLLQAKNCIYKLPGGRLRPGESDVSGLKRKLS 386
           +NY  +G RTCV AVILVELFKHPHLLLLQ KN  +KLPGGRLRPGES+++GLKRKLS
Sbjct: 130 SNYSRYGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLS 187