BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016843
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   162   3e-38
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   150   1e-34
ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec...   145   4e-33

>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  162 bits (410), Expect = 3e-38
 Identities = 74/99 (74%), Positives = 84/99 (84%)
 Frame = -3

Query: 297 LKRKLSSKLSADDDCHQTQWEVGECIGTWWKSDFETLPYPYLPSSGKNPKECTKLFLVKL 118
           LKRKLS KLS ++D   + WEVGEC+G WW+ DFETL YPYLP + KNPKECTKLFLVKL
Sbjct: 175 LKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKL 234

Query: 117 PSSRDFIVPKNLKLLAVPMCQLHENRKTYGSIIAGIPQM 1
           P SR FIVPKNLKLLA+P+CQLHEN KTYG IIAG+PQ+
Sbjct: 235 PPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGVPQL 273


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  162 bits (410), Expect = 3e-38
 Identities = 74/99 (74%), Positives = 84/99 (84%)
 Frame = -3

Query: 297 LKRKLSSKLSADDDCHQTQWEVGECIGTWWKSDFETLPYPYLPSSGKNPKECTKLFLVKL 118
           LKRKLS KLS ++D   + WEVGEC+G WW+ DFETL YPYLP + KNPKECTKLFLVKL
Sbjct: 182 LKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKL 241

Query: 117 PSSRDFIVPKNLKLLAVPMCQLHENRKTYGSIIAGIPQM 1
           P SR FIVPKNLKLLA+P+CQLHEN KTYG IIAG+PQ+
Sbjct: 242 PPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGVPQL 280


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/99 (70%), Positives = 82/99 (82%)
 Frame = -3

Query: 297 LKRKLSSKLSADDDCHQTQWEVGECIGTWWKSDFETLPYPYLPSSGKNPKECTKLFLVKL 118
           LKRKLS KLS + D  QT WEVGEC+G WW+ DFETL YPYLP + K PKECTKLFLV+L
Sbjct: 107 LKRKLSRKLSNNQD--QTDWEVGECLGMWWRPDFETLLYPYLPPNLKTPKECTKLFLVRL 164

Query: 117 PSSRDFIVPKNLKLLAVPMCQLHENRKTYGSIIAGIPQM 1
           P+S  FIVPKNLKLLAVP+ Q+H+N KTYG II+G+PQ+
Sbjct: 165 PTSCKFIVPKNLKLLAVPLSQIHDNHKTYGGIISGVPQL 203


>ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|222854251|gb|EEE91798.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/99 (67%), Positives = 83/99 (83%)
 Frame = -3

Query: 297 LKRKLSSKLSADDDCHQTQWEVGECIGTWWKSDFETLPYPYLPSSGKNPKECTKLFLVKL 118
           L+RKLS  LS ++D     WEVG+C+G WW+SDFETL YPYLP + K PKECTKL++VKL
Sbjct: 103 LQRKLSRMLSVNED-ETDHWEVGDCLGMWWRSDFETLLYPYLPPNLKVPKECTKLYVVKL 161

Query: 117 PSSRDFIVPKNLKLLAVPMCQLHENRKTYGSIIAGIPQM 1
           P+SR FIVPKNLKLLAVP+CQ+HEN KTYG +I+G+PQ+
Sbjct: 162 PASRKFIVPKNLKLLAVPLCQVHENHKTYGPVISGVPQL 200


>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 217

 Score =  145 bits (365), Expect = 4e-33
 Identities = 65/99 (65%), Positives = 79/99 (79%)
 Frame = -3

Query: 297 LKRKLSSKLSADDDCHQTQWEVGECIGTWWKSDFETLPYPYLPSSGKNPKECTKLFLVKL 118
           L RKL+ KLSA+     + WEV EC+G WW+ DFETL +PYL ++ K  KECTKLFLVKL
Sbjct: 108 LTRKLTKKLSANGASDASHWEVSECLGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKL 167

Query: 117 PSSRDFIVPKNLKLLAVPMCQLHENRKTYGSIIAGIPQM 1
           P SR F+VPKNLKL+AVP+CQ+HEN KTYG II+GIPQ+
Sbjct: 168 PESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGIPQL 206