BLASTX nr result
ID: Atractylodes21_contig00016812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00016812
(893 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 365 8e-99
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 362 6e-98
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 362 6e-98
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,... 351 1e-94
ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|2... 342 7e-92
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Vitis vinifera]
Length = 641
Score = 365 bits (937), Expect = 8e-99
Identities = 176/281 (62%), Positives = 224/281 (79%), Gaps = 1/281 (0%)
Frame = -1
Query: 842 SCFVFNKLLSSLVKSNQVDEAVAFFENIILGSQCYSP-DACTFNIVISGLCRAREVNKAF 666
S V+NKLL+ LV+ NQVDEAV FF + + P D+C+FNI+I GLCR +V+KAF
Sbjct: 201 SLVVYNKLLNQLVRGNQVDEAVCFFREQM---GLHGPFDSCSFNILIRGLCRIGKVDKAF 257
Query: 665 GFFNQMRKFGCLPDLVTYNTLLNGFCRAGNVDKAHELLRETCTVDGCSPDVVTFTSVISG 486
FN+MR FGC PD++TYNTL+NGFCR VD+ H+LL+E + + SPDVVT+TS+ISG
Sbjct: 258 ELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISG 317
Query: 485 YCKLGKMDEAMVLFDNMISHEIRPNTVTFNVIIDGFGKIGNMVSVLSMYQKMVDLGCTPD 306
YCKLGKM++A +LF+NMIS I+PN TFN++I+GFGK+G+MVS +MY++M+ LGC PD
Sbjct: 318 YCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPD 377
Query: 305 VITFTSIIDGHCRLGELHQGLKIWDEMNSRNLYPNIYTFSILINTLCKENRLNEARDLLR 126
+ITFTS+IDGHCR G++ + LK+W E+N+RNL PN YTF+IL N LCKENRL+EAR LR
Sbjct: 378 IITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLR 437
Query: 125 QLKRRGDIVPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEK 3
LK R IV + F+YNPVIDGFCKAGNVDEANVI+ EMEEK
Sbjct: 438 DLKWR-HIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEK 477
Score = 101 bits (252), Expect = 2e-19
Identities = 64/238 (26%), Positives = 121/238 (50%), Gaps = 1/238 (0%)
Frame = -1
Query: 722 TFNIVISGLCRAREVNKAFGFFNQMRKFGCLPDLVTYNTLLNGFCRAGNVDKAHELLRET 543
T++ ++ L A ++ M G PD L++ AG + A
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTW---- 194
Query: 542 CTVDGCSPDVVTFTSVISGYCKLGKMDEAMVLFDNMISHEIRPNTVTFNVIIDGFGKIGN 363
VDG +V + +++ + ++DEA+ F + ++ +FN++I G +IG
Sbjct: 195 --VDGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGK 252
Query: 362 MVSVLSMYQKMVDLGCTPDVITFTSIIDGHCRLGELHQGLKIWDEMNSRN-LYPNIYTFS 186
+ ++ +M GC+PDVIT+ ++I+G CR+ E+ +G + E+ S+N L P++ T++
Sbjct: 253 VDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYT 312
Query: 185 ILINTLCKENRLNEARDLLRQLKRRGDIVPKAFVYNPVIDGFCKAGNVDEANVIVKEM 12
+I+ CK ++ +A L + G I P AF +N +I+GF K G++ A + +EM
Sbjct: 313 SIISGYCKLGKMEKASILFNNMISSG-IKPNAFTFNILINGFGKVGDMVSAENMYEEM 369
>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 362 bits (929), Expect = 6e-98
Identities = 171/281 (60%), Positives = 214/281 (76%)
Frame = -1
Query: 845 LSCFVFNKLLSSLVKSNQVDEAVAFFENIILGSQCYSPDACTFNIVISGLCRAREVNKAF 666
+S FV+N LL+ LVK N VDEAV F + + PD +FNI+I GLCR E++KAF
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAF 234
Query: 665 GFFNQMRKFGCLPDLVTYNTLLNGFCRAGNVDKAHELLRETCTVDGCSPDVVTFTSVISG 486
FF M FGC PD+V+YNTL+NGFCR + K H+LL+E + G SPDV+T+TS+ISG
Sbjct: 235 EFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294
Query: 485 YCKLGKMDEAMVLFDNMISHEIRPNTVTFNVIIDGFGKIGNMVSVLSMYQKMVDLGCTPD 306
YCKLG M A LFD M+S I+PN TFNV+IDGFGK+GNM S + MY+KM+ LGC PD
Sbjct: 295 YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354
Query: 305 VITFTSIIDGHCRLGELHQGLKIWDEMNSRNLYPNIYTFSILINTLCKENRLNEARDLLR 126
V+TFTS+IDG+CR GE++QGLK+W+EM RNL PN+YT+++LIN LCKENR+ EAR+ LR
Sbjct: 355 VVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLR 414
Query: 125 QLKRRGDIVPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEK 3
LK ++VPK F+YNPVIDGFCKAG VDEAN IV EM+EK
Sbjct: 415 HLK-SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK 454
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 362 bits (929), Expect = 6e-98
Identities = 171/281 (60%), Positives = 214/281 (76%)
Frame = -1
Query: 845 LSCFVFNKLLSSLVKSNQVDEAVAFFENIILGSQCYSPDACTFNIVISGLCRAREVNKAF 666
+S FV+N LL+ LVK N VDEAV F + + PD +FNI+I GLCR E++KAF
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAF 234
Query: 665 GFFNQMRKFGCLPDLVTYNTLLNGFCRAGNVDKAHELLRETCTVDGCSPDVVTFTSVISG 486
FF M FGC PD+V+YNTL+NGFCR + K H+LL+E + G SPDV+T+TS+ISG
Sbjct: 235 EFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISG 294
Query: 485 YCKLGKMDEAMVLFDNMISHEIRPNTVTFNVIIDGFGKIGNMVSVLSMYQKMVDLGCTPD 306
YCKLG M A LFD M+S I+PN TFNV+IDGFGK+GNM S + MY+KM+ LGC PD
Sbjct: 295 YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354
Query: 305 VITFTSIIDGHCRLGELHQGLKIWDEMNSRNLYPNIYTFSILINTLCKENRLNEARDLLR 126
V+TFTS+IDG+CR GE++QGLK+W+EM RNL PN+YT+++LIN LCKENR+ EAR+ LR
Sbjct: 355 VVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLR 414
Query: 125 QLKRRGDIVPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEK 3
LK ++VPK F+YNPVIDGFCKAG VDEAN IV EM+EK
Sbjct: 415 HLK-SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEK 454
>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 532
Score = 351 bits (901), Expect = 1e-94
Identities = 170/286 (59%), Positives = 219/286 (76%), Gaps = 1/286 (0%)
Frame = -1
Query: 857 KDGGLSCFVFNKLLSSLVKSNQVDEAVAFF-ENIILGSQCYSPDACTFNIVISGLCRARE 681
++ +S FV+N LL+ LVK +V EA+ F EN+ S P+ TFNI+I GLCR E
Sbjct: 157 EEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSP---PNTWTFNILIRGLCRVGE 213
Query: 680 VNKAFGFFNQMRKFGCLPDLVTYNTLLNGFCRAGNVDKAHELLRETCTVDGCSPDVVTFT 501
V K F FN M+ FGCLPD+VTYNTL++G C+A +D+A +LL+E + + CSPDV+T+T
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273
Query: 500 SVISGYCKLGKMDEAMVLFDNMISHEIRPNTVTFNVIIDGFGKIGNMVSVLSMYQKMVDL 321
S+ISG+ KLGK++ A VLF+ MI I P VTFNV+IDGFGKIGNMV+ +M++KM
Sbjct: 274 SIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASY 333
Query: 320 GCTPDVITFTSIIDGHCRLGELHQGLKIWDEMNSRNLYPNIYTFSILINTLCKENRLNEA 141
C PDV+TFTS+IDG+CR G++ GLK+WD M +RN+ PNIYT+S++IN LCK+NR++EA
Sbjct: 334 SCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEA 393
Query: 140 RDLLRQLKRRGDIVPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEK 3
RDLLRQLK D+ PK F+YNPVIDGFCKAGNVDEANVIV EMEEK
Sbjct: 394 RDLLRQLK-CSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEK 438
Score = 141 bits (355), Expect = 2e-31
Identities = 85/275 (30%), Positives = 141/275 (51%)
Frame = -1
Query: 830 FNKLLSSLVKSNQVDEAVAFFENIILGSQCYSPDACTFNIVISGLCRAREVNKAFGFFNQ 651
+N L+S L K+N++D A + + + C SPD T+ +ISG + ++ A F +
Sbjct: 236 YNTLISGLCKANELDRACDLLKEVQSRNDC-SPDVMTYTSIISGFRKLGKLEAASVLFEE 294
Query: 650 MRKFGCLPDLVTYNTLLNGFCRAGNVDKAHELLRETCTVDGCSPDVVTFTSVISGYCKLG 471
M + G P +VT+N L++GF + GN+ A E + E C PDVVTFTS+I GYC+ G
Sbjct: 295 MIRSGIEPTVVTFNVLIDGFGKIGNMVAA-EAMHEKMASYSCIPDVVTFTSLIDGYCRTG 353
Query: 470 KMDEAMVLFDNMISHEIRPNTVTFNVIIDGFGKIGNMVSVLSMYQKMVDLGCTPDVITFT 291
+ + ++D M + + PN T++VII+ K + + +++ P +
Sbjct: 354 DIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYN 413
Query: 290 SIIDGHCRLGELHQGLKIWDEMNSRNLYPNIYTFSILINTLCKENRLNEARDLLRQLKRR 111
+IDG C+ G + + I EM + P+ TF+ILI C + R+ EA D+ +++
Sbjct: 414 PVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAI 473
Query: 110 GDIVPKAFVYNPVIDGFCKAGNVDEANVIVKEMEE 6
G P + ++ KAG EA IV+ E
Sbjct: 474 G-CAPDNITISSLVACLLKAGKPSEAFHIVQTASE 507
Score = 105 bits (263), Expect = 1e-20
Identities = 58/202 (28%), Positives = 106/202 (52%)
Frame = -1
Query: 617 TYNTLLNGFCRAGNVDKAHELLRETCTVDGCSPDVVTFTSVISGYCKLGKMDEAMVLFDN 438
TY L+ C+ G D E++ DG D +++ + + GK D A L
Sbjct: 95 TYELLIRSLCQMGLHDLV-EMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIE 153
Query: 437 MISHEIRPNTVTFNVIIDGFGKIGNMVSVLSMYQKMVDLGCTPDVITFTSIIDGHCRLGE 258
+ E R ++ +N +++ K G + + ++++ + P+ TF +I G CR+GE
Sbjct: 154 VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGE 213
Query: 257 LHQGLKIWDEMNSRNLYPNIYTFSILINTLCKENRLNEARDLLRQLKRRGDIVPKAFVYN 78
+ +G ++++ M S P++ T++ LI+ LCK N L+ A DLL++++ R D P Y
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273
Query: 77 PVIDGFCKAGNVDEANVIVKEM 12
+I GF K G ++ A+V+ +EM
Sbjct: 274 SIISGFRKLGKLEAASVLFEEM 295
>ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|222833317|gb|EEE71794.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 342 bits (877), Expect = 7e-92
Identities = 163/285 (57%), Positives = 210/285 (73%)
Frame = -1
Query: 857 KDGGLSCFVFNKLLSSLVKSNQVDEAVAFFENIILGSQCYSPDACTFNIVISGLCRAREV 678
K+ ++ FV+N LLS LVK NQV EA+ F+ ++ PD TFNI+I GLCR V
Sbjct: 137 KEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQS--PPDTWTFNILIRGLCRVGGV 194
Query: 677 NKAFGFFNQMRKFGCLPDLVTYNTLLNGFCRAGNVDKAHELLRETCTVDGCSPDVVTFTS 498
++AF F M FGCLPD+VTYNTL+NG C+A V + EL +E + CSPD+VT+TS
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254
Query: 497 VISGYCKLGKMDEAMVLFDNMISHEIRPNTVTFNVIIDGFGKIGNMVSVLSMYQKMVDLG 318
+ISG+CK GKM EA LF+ M+ I+PN +TFNV+IDGFGKIGN+ +MY+KM
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD 314
Query: 317 CTPDVITFTSIIDGHCRLGELHQGLKIWDEMNSRNLYPNIYTFSILINTLCKENRLNEAR 138
C+ DV+TFTS+IDG+CR G+++ GLK W+ M +RN+ P +YT+++LIN LCKENRLNEAR
Sbjct: 315 CSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEAR 374
Query: 137 DLLRQLKRRGDIVPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEK 3
D L Q+K I+PK F+YNPVIDGFCKAGNVDE NVI+KEMEEK
Sbjct: 375 DFLGQIK-NSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEK 418
Score = 148 bits (373), Expect = 2e-33
Identities = 86/272 (31%), Positives = 143/272 (52%), Gaps = 1/272 (0%)
Frame = -1
Query: 830 FNKLLSSLVKSNQVDEAVAFFENIILGSQCYSPDACTFNIVISGLCRAREVNKAFGFFNQ 651
+N L++ L K+N+V F+ I S C SPD T+ +ISG C++ ++ +A F +
Sbjct: 216 YNTLINGLCKANEVQRGCELFKEIQSRSDC-SPDIVTYTSIISGFCKSGKMKEASNLFEE 274
Query: 650 MRKFGCLPDLVTYNTLLNGFCRAGNVDKAHELLRETCTVDGCSPDVVTFTSVISGYCKLG 471
M + G P+++T+N L++GF + GN+ +A + R+ D CS DVVTFTS+I GYC+ G
Sbjct: 275 MMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD-CSADVVTFTSLIDGYCRAG 333
Query: 470 KMDEAMVLFDNMISHEIRPNTVTFNVIIDGFGKIGNMVSVLSMYQKMVDLGCTPDVITFT 291
+++ + ++ M + + P T+ V+I+ K + ++ + P +
Sbjct: 334 QVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYN 393
Query: 290 SIIDGHCRLGELHQGLKIWDEMNSRNLYPNIYTFSILINTLCKENRLNEARDLL-RQLKR 114
+IDG C+ G + +G I EM + P+ TF+ILI C + R+ EA ++ R L
Sbjct: 394 PVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLAT 453
Query: 113 RGDIVPKAFVYNPVIDGFCKAGNVDEANVIVK 18
R P N +I KAG +EA I K
Sbjct: 454 R--CAPDNITVNSLISCLLKAGMPNEAYRIRK 483
Score = 129 bits (324), Expect = 9e-28
Identities = 75/249 (30%), Positives = 135/249 (54%), Gaps = 3/249 (1%)
Frame = -1
Query: 749 SQCYSPDACTFNIVISGLCRAREVNKAFGFFNQMRKFGCLPDLVTYNTLLNGFCRAGNVD 570
+ CYS T+N+++ LC+ + F+ M G LPD L+ +A + D
Sbjct: 70 NHCYS----TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFD 125
Query: 569 KAHELLRETCTVDGCSPDVVTF--TSVISGYCKLGKMDEAMVLFDNMISHEIRPNTVTFN 396
+LL E V G + +F +++S K ++ EA+ LF + + P+T TFN
Sbjct: 126 MVKKLLAE---VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFN 182
Query: 395 VIIDGFGKIGNMVSVLSMYQKMVDLGCTPDVITFTSIIDGHCRLGELHQGLKIWDEMNSR 216
++I G ++G + +++ M GC PDV+T+ ++I+G C+ E+ +G +++ E+ SR
Sbjct: 183 ILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSR 242
Query: 215 -NLYPNIYTFSILINTLCKENRLNEARDLLRQLKRRGDIVPKAFVYNPVIDGFCKAGNVD 39
+ P+I T++ +I+ CK ++ EA +L ++ R G I P +N +IDGF K GN+
Sbjct: 243 SDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSG-IQPNVITFNVLIDGFGKIGNIA 301
Query: 38 EANVIVKEM 12
EA + ++M
Sbjct: 302 EAEAMYRKM 310