BLASTX nr result

ID: Atractylodes21_contig00016784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016784
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent hel...   184   3e-44
emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]   184   3e-44
ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   172   6e-41
ref|XP_004150524.1| PREDICTED: uncharacterized ATP-dependent hel...   172   6e-41
ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like ...   171   1e-40

>ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
            [Vitis vinifera]
          Length = 1375

 Score =  184 bits (466), Expect = 3e-44
 Identities = 103/178 (57%), Positives = 121/178 (67%), Gaps = 13/178 (7%)
 Frame = +3

Query: 3    VIIMSCVRASGHGVGFVADIRRMNVALTRAKRALWVMGNASALVQSDDWAALIADAKARK 182
            VIIMSCVRAS HGVGFVADIRRMNVALTRA+RALWVMGNA+AL+QSDDWAALI+DA+AR 
Sbjct: 1199 VIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWAALISDARARS 1258

Query: 183  SYMDVDSLPKDFLAPKVAPPAYGPPLAKFPNAXXXXXXXXXXXXY--EHMEPRLGPP--- 347
             Y+D+DSLPK+FL PK   P YGP   K  +                 H+E + G P   
Sbjct: 1259 CYLDMDSLPKEFLVPK--GPTYGPLSGKVSSNMRGLRSAGPRHRQLDMHVESKSGTPSED 1316

Query: 348  DDKTNSSSTSRNGIYRPPLKPPSENSMGDF--------DGWQYSSQRRQNSTGVTGKR 497
            D+K+N+S  SRNG YR PLKP  ENS+ DF        D WQY  Q++Q+S GV  KR
Sbjct: 1317 DEKSNASLISRNGNYR-PLKPTMENSLDDFDQSADKSRDAWQYGIQKKQSSAGVVAKR 1373


>emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
          Length = 1408

 Score =  184 bits (466), Expect = 3e-44
 Identities = 103/178 (57%), Positives = 121/178 (67%), Gaps = 13/178 (7%)
 Frame = +3

Query: 3    VIIMSCVRASGHGVGFVADIRRMNVALTRAKRALWVMGNASALVQSDDWAALIADAKARK 182
            VIIMSCVRAS HGVGFVADIRRMNVALTRA+RALWVMGNA+AL+QSDDWAALI+DA+AR 
Sbjct: 1232 VIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWAALISDARARS 1291

Query: 183  SYMDVDSLPKDFLAPKVAPPAYGPPLAKFPNAXXXXXXXXXXXXY--EHMEPRLGPP--- 347
             Y+D+DSLPK+FL PK   P YGP   K  +                 H+E + G P   
Sbjct: 1292 CYLDMDSLPKEFLVPK--GPTYGPLSGKVSSNMRGLRSAGPRHRQLDMHVESKSGTPSED 1349

Query: 348  DDKTNSSSTSRNGIYRPPLKPPSENSMGDF--------DGWQYSSQRRQNSTGVTGKR 497
            D+K+N+S  SRNG YR PLKP  ENS+ DF        D WQY  Q++Q+S GV  KR
Sbjct: 1350 DEKSNASLISRNGNYR-PLKPTMENSLDDFDQSADKSRDAWQYGIQKKQSSAGVVAKR 1406


>ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized ATP-dependent
            helicase C29A10.10c-like [Cucumis sativus]
          Length = 1363

 Score =  172 bits (437), Expect = 6e-41
 Identities = 99/176 (56%), Positives = 112/176 (63%), Gaps = 11/176 (6%)
 Frame = +3

Query: 3    VIIMSCVRASGHGVGFVADIRRMNVALTRAKRALWVMGNASALVQSDDWAALIADAKARK 182
            VIIMSCVRAS HGVGFVADIRRMNVALTRA+RALWVMGNA+AL+QSDDWAALI DAKAR 
Sbjct: 1187 VIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNANALIQSDDWAALITDAKARN 1246

Query: 183  SYMDVDSLPKDFLAPKVAPPAYGPPLAKFPNAXXXXXXXXXXXXYEHMEPRLGPP---DD 353
             YMD++SLPKDFL  K +  +  P                      H+E R G P   D+
Sbjct: 1247 CYMDMESLPKDFLGQKGSTQSTLPGKNSSNTRGLRSALPRHRTLDIHVESRSGTPSEDDE 1306

Query: 354  KTNSSSTSRNGIYRPPLKPPSENSMGDF--------DGWQYSSQRRQNSTGVTGKR 497
            K+NS+  +RNG YRP  K   ENS  D         D WQY  Q+RQ STG  GKR
Sbjct: 1307 KSNSAVITRNGNYRPS-KAAVENSSEDLDQSGDKLRDTWQYGMQKRQGSTGTVGKR 1361


>ref|XP_004150524.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
            [Cucumis sativus]
          Length = 1363

 Score =  172 bits (437), Expect = 6e-41
 Identities = 99/176 (56%), Positives = 112/176 (63%), Gaps = 11/176 (6%)
 Frame = +3

Query: 3    VIIMSCVRASGHGVGFVADIRRMNVALTRAKRALWVMGNASALVQSDDWAALIADAKARK 182
            VIIMSCVRAS HGVGFVADIRRMNVALTRA+RALWVMGNA+AL+QSDDWAALI DAKAR 
Sbjct: 1187 VIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNANALIQSDDWAALITDAKARN 1246

Query: 183  SYMDVDSLPKDFLAPKVAPPAYGPPLAKFPNAXXXXXXXXXXXXYEHMEPRLGPP---DD 353
             YMD++SLPKDFL  K +  +  P                      H+E R G P   D+
Sbjct: 1247 CYMDMESLPKDFLGQKGSTQSTLPGKNSSNTRGLRSALPRHRTLDIHVESRSGTPSEDDE 1306

Query: 354  KTNSSSTSRNGIYRPPLKPPSENSMGDF--------DGWQYSSQRRQNSTGVTGKR 497
            K+NS+  +RNG YRP  K   ENS  D         D WQY  Q+RQ STG  GKR
Sbjct: 1307 KSNSAVITRNGNYRPS-KAAVENSSEDLDQSGDKLRDTWQYGMQKRQGSTGTVGKR 1361


>ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like [Glycine max]
          Length = 1388

 Score =  171 bits (434), Expect = 1e-40
 Identities = 104/193 (53%), Positives = 120/193 (62%), Gaps = 12/193 (6%)
 Frame = +3

Query: 3    VIIMSCVRASGHGVGFVADIRRMNVALTRAKRALWVMGNASALVQSDDWAALIADAKARK 182
            VIIMSCVRAS HGVGFVADIRRMNVALTRA+RALWVMGNA+AL+QS+DWAALI DAK+R 
Sbjct: 1186 VIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWAALINDAKSRN 1245

Query: 183  SYMDVDSLPKDFLAPKVAPPAYGPPLAKFPNAXXXXXXXXXXXXYE-HMEPRLGPP---D 350
             YMD+DSLPKDFL  K AP     P     N              + HME RLGPP   D
Sbjct: 1246 CYMDMDSLPKDFLVSK-APSYTSLPGKPSSNMRGMRSGGPRYRSMDMHMESRLGPPSEED 1304

Query: 351  DKTNSSSTSRNGIYRPPLKPPSENSMGDF--------DGWQYSSQRRQNSTGVTGKRGP* 506
            +   +  +SRNG  R   +   ENS+ DF        D WQY  Q++QNS+G  GKR   
Sbjct: 1305 ENMGAPVSSRNGNLRQS-RYSMENSLDDFEHGGDKSRDAWQYGIQKKQNSSGSMGKR--- 1360

Query: 507  DLFSDIAGTHGKV 545
            D F  I G   K+
Sbjct: 1361 DCFGQILGLSAKL 1373


Top