BLASTX nr result

ID: Atractylodes21_contig00016739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016739
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|3554...    73   7e-11
ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...    62   9e-08
ref|XP_003608356.1| F-box family-3 [Medicago truncatula] gi|3555...    60   4e-07
ref|XP_003598923.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    58   2e-06
ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...    58   2e-06

>ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|355487963|gb|AES69166.1|
           F-box family-9 [Medicago truncatula]
          Length = 383

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 61/216 (28%), Positives = 92/216 (42%)
 Frame = +3

Query: 3   EFVKHALSHHNHRTKVFAVDLTFRGDFRQFFVRSILNYAYSHNVRQLTLVGLTDKLSGIP 182
           +FV   LS  N  T +  +D   RG      +  IL YA+SHNV++L  V L+  +   P
Sbjct: 73  KFVSQILSLRNDSTALHTLDFHCRGRLELHILERILKYAFSHNVQRLG-VDLSCNIPQFP 131

Query: 183 QCLFSSHTLKHLTITFSTSQRSSYYWFDSGFFPESAWDFPALESLNLSNVRLGSGMAKSL 362
              FS HTL  L +         +++  +  FP+S  D PAL +L+L       G     
Sbjct: 132 LSFFSCHTLTSLDLRI-------HFFTLTNLFPDSL-DLPALTNLSLQGFLFCVGDDGRA 183

Query: 363 NLFSKCVNLKDLTIHRFSLYGLDVFTICAPQLSNLTITNSYAFPKLLNVVAPQLENLTAS 542
           N FS    L  L I+R ++       I +  L+NL + N ++  ++             S
Sbjct: 184 NPFSTLNKLNSLIINRCAVRDKQNLYISSATLANLKLINDFSSSRI---------KFQLS 234

Query: 543 VSITGEYMYRDTKGFDSLRLSTEGLDSLEKVKLSLS 650
                 + YR   GF  L  S   L S++ V L +S
Sbjct: 235 TPSLCTFAYRGHVGFQKLFTSNSNLSSIKHVNLDVS 270


>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 50/174 (28%), Positives = 78/174 (44%)
 Frame = +3

Query: 3   EFVKHALSHHNHRTKVFAVDLTFRGDFRQFFVRSILNYAYSHNVRQLTLVGLTDKLSGIP 182
           +FV   LSH +    +  +D    G      ++ I+NYA+SHNV++L  + +   +  I 
Sbjct: 86  KFVSKILSHRDGTIALQELDFERVGSIEPHLLKRIVNYAFSHNVQRLG-ISVKGDICHIL 144

Query: 183 QCLFSSHTLKHLTITFSTSQRSSYYWFDSGFFPESAWDFPALESLNLSNVRLGSGMAKSL 362
            C+ S  TL  L ++ S   R +Y       FP+S  D PAL SL+L N    +      
Sbjct: 145 PCVSSCRTLTSLKLSVSPKGRHNY---GRTLFPKSL-DLPALTSLHLGNFVFCASDKGRT 200

Query: 363 NLFSKCVNLKDLTIHRFSLYGLDVFTICAPQLSNLTITNSYAFPKLLNVVAPQL 524
             FS    L  L I   ++    +  I +  L NLT+ N  +    + + AP L
Sbjct: 201 EPFSGFNKLNSLVIDNCTVKDAQILCILSETLVNLTMRNHSSDVYKIELSAPSL 254


>ref|XP_003608356.1| F-box family-3 [Medicago truncatula] gi|355509411|gb|AES90553.1|
           F-box family-3 [Medicago truncatula]
          Length = 479

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 4/244 (1%)
 Frame = +3

Query: 6   FVKHALSHHNHRTKVFAVDLTFRGDFRQFFVRSILNYAYSHNVRQLTL-VGLTDKLSGIP 182
           FV   L+ H+  T +  +DL  RGD     ++ ILNY  SHN     L + +    S I 
Sbjct: 66  FVSKILTLHHTSTALHKLDLDRRGDIEPQLLKKILNYVTSHNTHLHELGISVRGDSSLIM 125

Query: 183 QCLFSSHTLKHLTITFSTSQRSSYYWFDSGFFPESAWDFPALESLNLSNVRL---GSGMA 353
           +C+ S H L  L ++      +  + +    FP+S  +FP L +L L N       +G A
Sbjct: 126 RCVSSCHALTSLKLSLYPRGSTHIHNYTKTLFPKSL-NFPFLTTLYLENFAFCGSENGCA 184

Query: 354 KSLNLFSKCVNLKDLTIHRFSLYGLDVFTICAPQLSNLTITNSYAFPKLLNVVAPQLENL 533
           +    F+K   L  L I    +    +  I +  L NL + ++        + AP L   
Sbjct: 185 EPFFAFTK---LNSLVISSCEVKDAQILNISSETLVNLALHDNLLDFVKFKLSAPSL--- 238

Query: 534 TASVSITGEYMYRDTKGFDSLRLSTEGLDSLEKVKLSLSTSCYKWERYVPLLDLFQKLRS 713
             + + TG+ +          ++    L S+++V +      Y  +  + LL L Q L +
Sbjct: 239 -CTFTFTGDLLQ---------KIYGSSLSSIKQVNIDAQEVLYSEDSAMVLLSLLQDLAN 288

Query: 714 AKFL 725
            + L
Sbjct: 289 VESL 292


>ref|XP_003598923.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355487971|gb|AES69174.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 455

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/161 (27%), Positives = 69/161 (42%)
 Frame = +3

Query: 3   EFVKHALSHHNHRTKVFAVDLTFRGDFRQFFVRSILNYAYSHNVRQLTLVGLTDKLSGIP 182
           +FV   LS  +    ++A++   +G    + ++ I NYA SHNV++L  + +   +    
Sbjct: 113 KFVSQVLSLRDRSNSLYALNFQRKGIMAPYLLKRIFNYAVSHNVQRLQ-IDVNSDIKSFS 171

Query: 183 QCLFSSHTLKHLTITFSTSQRSSYYWFDSGFFPESAWDFPALESLNLSNVRLGSGMAKSL 362
            C FS HTL  L +  +  + S        FFP+   + PAL  L+L +V    G     
Sbjct: 172 SCFFSCHTLTSLNLYVAHPRTSKKI-----FFPDYL-NLPALTRLHLGDVAFRGGAEP-- 223

Query: 363 NLFSKCVNLKDLTIHRFSLYGLDVFTICAPQLSNLTITNSY 485
             FS    L  L I  F + G     I +  L  L I   Y
Sbjct: 224 --FSAYPRLNSLMISNFEIIGEQNLYISSTTLVKLKIQVYY 262


>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 354

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 46/161 (28%), Positives = 72/161 (44%)
 Frame = +3

Query: 3   EFVKHALSHHNHRTKVFAVDLTFRGDFRQFFVRSILNYAYSHNVRQLTLVGLTDKLSGIP 182
           +FV H LSH +  T + A+D         + ++ I+ YA SH+V+QL  + +       P
Sbjct: 69  KFVSHVLSHRDDSTALQALDSHRASIVEAYLLKKIVKYAVSHSVQQLQ-ISVDADFQCFP 127

Query: 183 QCLFSSHTLKHLTITFSTSQRSSYYWFDSGFFPESAWDFPALESLNLSNVRLGSGMAKSL 362
            C FS +TL  L ++   +            FP +  + PAL SL+L +    +     +
Sbjct: 128 PCFFSCNTLTSLKLSLGFNT----------LFP-NFLNLPALTSLSLRSFVFHNSDDGRV 176

Query: 363 NLFSKCVNLKDLTIHRFSLYGLDVFTICAPQLSNLTITNSY 485
             FSK   L  L I    +       I +P+L +LTI  SY
Sbjct: 177 EPFSKFKMLNSLIIDSCMVCDAQNLCISSPKLVSLTILQSY 217


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