BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016737
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   149   6e-34
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    149   8e-34
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...   142   9e-32
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...   142   1e-31
gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryz...   139   6e-31

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  149 bits (377), Expect = 6e-34
 Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 24/233 (10%)
 Frame = +2

Query: 2   ESSKAD----EEWEDLDLRAASAIRLCLAKNVLANVHGISTAKELWEKLEQLYQGKGISN 169
           +S K D    E+W DLD RAASAIRL L+ +V+ N+    TA+ +W +LE LY  K ++N
Sbjct: 40  DSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTN 99

Query: 170 RLYLKEQFHTLRMNEGTKISDHLSVLNNIVSELEAIGVEVEDEDKALKFILSLTPSYEHM 349
           +LYLK+Q + L M+EGT    HL+V N ++++L  +GV++E+EDKA+  + SL  SY+++
Sbjct: 100 KLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNL 159

Query: 350 KPILMYGKETLKYADVTSKLLSEEKR------------LEGNNSTSSEGTVLVARHG--- 484
              +++GK T++  DVTS LL  EK              EG   +    +    R G   
Sbjct: 160 ATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARG 219

Query: 485 --KKRNSGKNLTCWKCEQTGHVKSNCPG---GAKSAKGSNSKANIVSLIVGDD 628
             K R+  +   C+ C Q GH K +CP    G     G  +  N  +++  +D
Sbjct: 220 KSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNND 272


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  149 bits (376), Expect = 8e-34
 Identities = 81/224 (36%), Positives = 129/224 (57%), Gaps = 20/224 (8%)
 Frame = +2

Query: 20  EEWEDLDLRAASAIRLCLAKNVLANVHGISTAKELWEKLEQLYQGKGISNRLYLKEQFHT 199
           E+WE+LD +AASAIRL L  +V+ N+    +A  +W KLE LY  K ++N+LYLK+Q +T
Sbjct: 51  EDWEELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYT 110

Query: 200 LRMNEGTKISDHLSVLNNIVSELEAIGVEVEDEDKALKFILSLTPSYEHMKPILMYGKET 379
           L M+EGT    HL+VLN ++++L  +GV++E+EDK +  + SL  SY+ +   +++GK++
Sbjct: 111 LHMDEGTNFLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYDTLSTTILHGKDS 170

Query: 380 LKYADVTSKLLSEEK-RLEGNN----------------STSSEGTVLVARHGKKRNSGKN 508
           ++  DVTS LL  EK R +  N                S+S+ G        K R+  K 
Sbjct: 171 IQLKDVTSALLLNEKMRKKPENHGQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSKA 230

Query: 509 LTCWKCEQTGHVKSNCPG---GAKSAKGSNSKANIVSLIVGDDE 631
             C+ C+Q GH K +CP    G   + G  +  N  +++  +D+
Sbjct: 231 RNCYNCDQPGHFKRDCPNPKRGKGESSGQKNDDNTAAMVQNNDD 274


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score =  142 bits (358), Expect = 9e-32
 Identities = 73/199 (36%), Positives = 120/199 (60%), Gaps = 7/199 (3%)
 Frame = +2

Query: 23  EWEDLDLRAASAIRLCLAKNVLANVHGISTAKELWEKLEQLYQGKGISNRLYLKEQFHTL 202
           +WE++  +AA+ IRL L+ +V+  V    T+KE+W KL  LY  K ++++LYLK+Q + L
Sbjct: 52  KWEEMKAQAAATIRLSLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGL 111

Query: 203 RMNEGTKISDHLSVLNNIVSELEAIGVEVEDEDKALKFILSLTPSYEHMKPILMYGKETL 382
           +M E + +  H+ V N +V +L  + V+++DEDKA+  + SL PSYEH+  IL +GK+T+
Sbjct: 112 QMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSYEHVVTILTHGKDTI 171

Query: 383 KYADVTSKL---LSEEKRLEGNNSTSSEGTVLVARH----GKKRNSGKNLTCWKCEQTGH 541
           K   ++S L   L   K+ E   ++ +E  ++ A+H    G  ++  K   C+KC + GH
Sbjct: 172 KTEIISSLLARDLRRSKKNEAMEASQAESLLVKAKHDHEAGVSKSKEKGARCYKCHEFGH 231

Query: 542 VKSNCPGGAKSAKGSNSKA 598
           ++ NCP   K   G  S A
Sbjct: 232 IRRNCPLLKKRKDGIASLA 250


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score =  142 bits (357), Expect = 1e-31
 Identities = 74/209 (35%), Positives = 125/209 (59%), Gaps = 16/209 (7%)
 Frame = +2

Query: 23  EWEDLDLRAASAIRLCLAKNVLANVHGISTAKELWEKLEQLYQGKGISNRLYLKEQFHTL 202
           +WE++  +AA+ IRL L+ +V+  V    T KE+W+KL  LY  K ++++LYLK+Q + L
Sbjct: 52  KWEEMKAQAAATIRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGL 111

Query: 203 RMNEGTKISDHLSVLNNIVSELEAIGVEVEDEDKALKFILSLTPSYEHMKPILMYGKETL 382
           +M E + +  H+ V N +V +L  + V+++DED A+  + SL PSYEH+   LM+GK+T+
Sbjct: 112 QMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDMAIILLCSLPPSYEHVVTTLMHGKDTV 171

Query: 383 KYADVTSKLLSEEKRLEGNN----STSSEGTVLVARH----GKKRNSGKNLTCWKCEQTG 538
           K  +  S LL+ + R    N    ++ +E  ++ A+H    G  ++  K   C+KC + G
Sbjct: 172 KTEEKISSLLARDLRRSNKNEAMEASQAESLLVKAKHDHEAGVSKSKDKGARCYKCHEFG 231

Query: 539 HVKSNCP------GGAKS--AKGSNSKAN 601
           H++ NCP      GG  S  A+G +S ++
Sbjct: 232 HIRRNCPLLKKRKGGIASLAARGDDSDSS 260


>gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryza sativa Japonica
           Group] gi|108706491|gb|ABF94286.1| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 556

 Score =  139 bits (351), Expect = 6e-31
 Identities = 77/235 (32%), Positives = 135/235 (57%), Gaps = 16/235 (6%)
 Frame = +2

Query: 23  EWEDLDLRAASAIRLCLAKNVLANVHGISTAKELWEKLEQLYQGKGISNRLYLKEQFHTL 202
           +W ++  +A + IRL L+  V+  V    T KE+W+KL  LY  K ++++LYLK+Q + L
Sbjct: 183 KWVEMKAQATAIIRLSLSDFVMYQVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGL 242

Query: 203 RMNEGTKISDHLSVLNNIVSELEAIGVEVEDEDKALKFILSLTPSYEHMKPILMYGKETL 382
           +M E + +  H+ V N +V +L  + V+++DEDKA+  + SL PS+EH+   L +GK+T+
Sbjct: 243 QMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSFEHVVTTLTHGKDTV 302

Query: 383 KYADVTSKLLSEE----KRLEGNNSTSSEGTVLVARH----GKKRNSGKNLTCWKCEQTG 538
           K  ++ S LL+ +    K+ E   ++ +E  ++ A+H    G  ++  K   C+KC + G
Sbjct: 303 KTEEIISSLLARDLRRSKKNEAMEASQAESLLVKAKHDHEAGVSKSKEKGARCYKCHEFG 362

Query: 539 HVKSNCP------GGAKS--AKGSNSKANIVSLIVGDDEFC*EMRYIIMICSLYH 679
           H++ NCP      GG  S  A+G NS ++   ++   +E   E  +++   S YH
Sbjct: 363 HIRRNCPLLKKRKGGIASLAARGDNSDSSSHEILTVSNEKSGE-AWMLDSASSYH 416