BLASTX nr result
ID: Atractylodes21_contig00016727
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00016727
(718 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l... 340 2e-91
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta... 328 9e-88
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su... 325 6e-87
emb|CBI21412.3| unnamed protein product [Vitis vinifera] 325 6e-87
ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic su... 315 6e-84
>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
Length = 1561
Score = 340 bits (871), Expect = 2e-91
Identities = 163/230 (70%), Positives = 186/230 (80%)
Frame = +2
Query: 2 SKETGDFCLEQIXXXXXXXXXXXXIHNKLRKVQEDMRNGQIALEKYIITKTLTKPPEAYP 181
SKE GDFCL QI IHN L KVQE MR GQI LEKY+ITK+LTKPPEAYP
Sbjct: 1168 SKELGDFCLSQILSGGSCEDVIESIHNALMKVQEQMRTGQIELEKYVITKSLTKPPEAYP 1227
Query: 182 DAKSQPHVEVALRLRKLGYSSGCSAGDTVPYIICCEQGKGSSTSAGIAQRARHPDELKKD 361
DAKSQPHVEVALRL+K GY +GCSAGDTVPY+ICCEQG GS+TS GIAQRARHPDELK+D
Sbjct: 1228 DAKSQPHVEVALRLKKSGYVTGCSAGDTVPYVICCEQGNGSTTSVGIAQRARHPDELKRD 1287
Query: 362 NENLMIDIDYYLAQQIHPVVSRLCASIEGTSPACLADCLGLDPSKFQSKSSEVANNDHSG 541
N N ++DIDYYLAQQIHPV+SRLCASI+GTSPA LADCLGLD SKFQ+KSSE N+D S
Sbjct: 1288 NGNWIVDIDYYLAQQIHPVISRLCASIQGTSPARLADCLGLDSSKFQNKSSEAVNDDPSN 1347
Query: 542 SVLCVTDDEERYRGCEPLSLSCPGCSGTFDCPSVLSYIHTVTLEKQADLQ 691
++LCV DDEER+RGCEPL+L+CP CS +F+C + S I + + ADLQ
Sbjct: 1348 ALLCVADDEERFRGCEPLTLTCPSCSCSFECAPIFSSICSSIRQNPADLQ 1397
>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
gi|223537171|gb|EEF38804.1| DNA polymerase alpha
catalytic subunit, putative [Ricinus communis]
Length = 1526
Score = 328 bits (840), Expect = 9e-88
Identities = 162/237 (68%), Positives = 181/237 (76%)
Frame = +2
Query: 2 SKETGDFCLEQIXXXXXXXXXXXXIHNKLRKVQEDMRNGQIALEKYIITKTLTKPPEAYP 181
SKE GDFCL QI IHN L KVQE+MRNGQ+ALEKYIITKTLTKPPEAYP
Sbjct: 1132 SKELGDFCLAQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYIITKTLTKPPEAYP 1191
Query: 182 DAKSQPHVEVALRLRKLGYSSGCSAGDTVPYIICCEQGKGSSTSAGIAQRARHPDELKKD 361
DAK+QPHV VALRL++ GY++GCS GDTVPYIICCEQG +S+GIAQRARHPDELKKD
Sbjct: 1192 DAKNQPHVMVALRLKQSGYTTGCSVGDTVPYIICCEQGATPGSSSGIAQRARHPDELKKD 1251
Query: 362 NENLMIDIDYYLAQQIHPVVSRLCASIEGTSPACLADCLGLDPSKFQSKSSEVANNDHSG 541
+ MIDIDYYL+QQIHPVVSRLCASI+GTSP LADCLGLD SKFQ KSSE NND +
Sbjct: 1252 DGKWMIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQIKSSEAINNDPAS 1311
Query: 542 SVLCVTDDEERYRGCEPLSLSCPGCSGTFDCPSVLSYIHTVTLEKQADLQNQADLQN 712
S+L +DEERYR CEPL LSCP CSGTF+CP+V I T LQ + + N
Sbjct: 1312 SLLFAVNDEERYRSCEPLLLSCPSCSGTFECPAVFGSICTSISANPTKLQVEESVSN 1368
>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
vinifera]
Length = 1522
Score = 325 bits (833), Expect = 6e-87
Identities = 163/230 (70%), Positives = 182/230 (79%)
Frame = +2
Query: 2 SKETGDFCLEQIXXXXXXXXXXXXIHNKLRKVQEDMRNGQIALEKYIITKTLTKPPEAYP 181
SKE GDF L QI IHN L KVQEDMRNG++ALEKYIITK+LTKPPEAYP
Sbjct: 1132 SKELGDFSLSQILSGGSCEDVVESIHNSLMKVQEDMRNGEVALEKYIITKSLTKPPEAYP 1191
Query: 182 DAKSQPHVEVALRLRKLGYSSGCSAGDTVPYIICCEQGKGSSTSAGIAQRARHPDELKKD 361
D K+QPHV+VALRL++ GYS+GCSAGDTVPYIICCEQG S +S GIAQRARHPDELK+D
Sbjct: 1192 D-KNQPHVQVALRLKQSGYSTGCSAGDTVPYIICCEQGTSSGSSTGIAQRARHPDELKRD 1250
Query: 362 NENLMIDIDYYLAQQIHPVVSRLCASIEGTSPACLADCLGLDPSKFQSKSSEVANNDHSG 541
N MIDIDYYLAQQIHPVVSRLCASI+GTSPA LADCLGLD SKFQS+ SE NND S
Sbjct: 1251 NGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPARLADCLGLDSSKFQSRRSEAINNDFSI 1310
Query: 542 SVLCVTDDEERYRGCEPLSLSCPGCSGTFDCPSVLSYIHTVTLEKQADLQ 691
S+L + DEERYRGCE L LSCP C GTFDCP++ + +HT EK +Q
Sbjct: 1311 SLL--SADEERYRGCEHLILSCPSCFGTFDCPTLFNSVHTSITEKSTQVQ 1358
>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
Length = 1561
Score = 325 bits (833), Expect = 6e-87
Identities = 163/230 (70%), Positives = 182/230 (79%)
Frame = +2
Query: 2 SKETGDFCLEQIXXXXXXXXXXXXIHNKLRKVQEDMRNGQIALEKYIITKTLTKPPEAYP 181
SKE GDF L QI IHN L KVQEDMRNG++ALEKYIITK+LTKPPEAYP
Sbjct: 1171 SKELGDFSLSQILSGGSCEDVVESIHNSLMKVQEDMRNGEVALEKYIITKSLTKPPEAYP 1230
Query: 182 DAKSQPHVEVALRLRKLGYSSGCSAGDTVPYIICCEQGKGSSTSAGIAQRARHPDELKKD 361
D K+QPHV+VALRL++ GYS+GCSAGDTVPYIICCEQG S +S GIAQRARHPDELK+D
Sbjct: 1231 D-KNQPHVQVALRLKQSGYSTGCSAGDTVPYIICCEQGTSSGSSTGIAQRARHPDELKRD 1289
Query: 362 NENLMIDIDYYLAQQIHPVVSRLCASIEGTSPACLADCLGLDPSKFQSKSSEVANNDHSG 541
N MIDIDYYLAQQIHPVVSRLCASI+GTSPA LADCLGLD SKFQS+ SE NND S
Sbjct: 1290 NGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPARLADCLGLDSSKFQSRRSEAINNDFSI 1349
Query: 542 SVLCVTDDEERYRGCEPLSLSCPGCSGTFDCPSVLSYIHTVTLEKQADLQ 691
S+L + DEERYRGCE L LSCP C GTFDCP++ + +HT EK +Q
Sbjct: 1350 SLL--SADEERYRGCEHLILSCPSCFGTFDCPTLFNSVHTSITEKSTQVQ 1397
>ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Glycine max]
Length = 1512
Score = 315 bits (807), Expect = 6e-84
Identities = 154/226 (68%), Positives = 173/226 (76%)
Frame = +2
Query: 2 SKETGDFCLEQIXXXXXXXXXXXXIHNKLRKVQEDMRNGQIALEKYIITKTLTKPPEAYP 181
+KE GDFCL QI IHN L KVQE+MRNGQ+ALEKY+ITKTLTKPPEAYP
Sbjct: 1120 AKELGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEAYP 1179
Query: 182 DAKSQPHVEVALRLRKLGYSSGCSAGDTVPYIICCEQGKGSSTSAGIAQRARHPDELKKD 361
DAK+QPHV VA RL++ GYSSGCS GDT+PYIIC EQG ++AGIAQRARHPDELK+D
Sbjct: 1180 DAKNQPHVLVAQRLKQQGYSSGCSVGDTIPYIICYEQGGSPGSAAGIAQRARHPDELKRD 1239
Query: 362 NENLMIDIDYYLAQQIHPVVSRLCASIEGTSPACLADCLGLDPSKFQSKSSEVANNDHSG 541
+IDIDYYL+QQIHPVVSRLCA I+GTSP LADCLGLD SKF KSSE N+D +
Sbjct: 1240 QGTWLIDIDYYLSQQIHPVVSRLCAPIQGTSPERLADCLGLDSSKFHHKSSEALNDDSAS 1299
Query: 542 SVLCVTDDEERYRGCEPLSLSCPGCSGTFDCPSVLSYIHTVTLEKQ 679
+ V DDEERYRGCEPL LSCP CSGTFDCP V I + E+Q
Sbjct: 1300 PLSFVADDEERYRGCEPLVLSCPSCSGTFDCPPVFKSICLLGSERQ 1345