BLASTX nr result

ID: Atractylodes21_contig00016726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016726
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   170   1e-40
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   167   1e-39
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   163   2e-38

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/107 (80%), Positives = 92/107 (85%)
 Frame = +1

Query: 1    VDLVQNNLNLEVIYGDTDSIMIYTGLDDINKAKSIAGNVIREVNKRYKRLEIDLDGLYKR 180
            VDLVQNNLNLEVIYGDTDSIMIYTGLDDI KAK+IAG VI+EVNK+Y+ LEIDLDGLYKR
Sbjct: 1032 VDLVQNNLNLEVIYGDTDSIMIYTGLDDITKAKAIAGKVIQEVNKKYRCLEIDLDGLYKR 1091

Query: 181  MXXXXXXXYAAVKEQIRDGKVYKVIERKGLDMVRRDWSLLSKETGDF 321
            M       YAAVK Q +DG  Y+VIERKGLDMVRRDWSLLSKE GDF
Sbjct: 1092 MLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDF 1138


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/107 (80%), Positives = 92/107 (85%)
 Frame = +1

Query: 1    VDLVQNNLNLEVIYGDTDSIMIYTGLDDINKAKSIAGNVIREVNKRYKRLEIDLDGLYKR 180
            VDLVQNNLNLEVIYGDTDSIMIYTGLDDI KAK+IAG VI+EVNK+Y+ LEIDLDGLYKR
Sbjct: 1071 VDLVQNNLNLEVIYGDTDSIMIYTGLDDITKAKAIAGKVIQEVNKKYRCLEIDLDGLYKR 1130

Query: 181  MXXXXXXXYAAVKEQIRDGKVYKVIERKGLDMVRRDWSLLSKETGDF 321
            M       YAAVK Q +DG  Y+VIERKGLDMVRRDWSLLSKE GDF
Sbjct: 1131 MLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDF 1177


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  168 bits (425), Expect = 5e-40
 Identities = 85/107 (79%), Positives = 92/107 (85%)
 Frame = +1

Query: 1    VDLVQNNLNLEVIYGDTDSIMIYTGLDDINKAKSIAGNVIREVNKRYKRLEIDLDGLYKR 180
            VDLVQNNLNLEVIYGDTDSIMIY+GLDDI KAK+IAG VI+EVNK+Y+ LEIDLDGLYKR
Sbjct: 817  VDLVQNNLNLEVIYGDTDSIMIYSGLDDIPKAKAIAGKVIQEVNKKYRCLEIDLDGLYKR 876

Query: 181  MXXXXXXXYAAVKEQIRDGKVYKVIERKGLDMVRRDWSLLSKETGDF 321
            M       YAAVK Q +DG  Y+VIERKGLDMVRRDWSLLSKE GDF
Sbjct: 877  MLLLKKKKYAAVKVQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDF 923


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  167 bits (422), Expect = 1e-39
 Identities = 84/107 (78%), Positives = 92/107 (85%)
 Frame = +1

Query: 1    VDLVQNNLNLEVIYGDTDSIMIYTGLDDINKAKSIAGNVIREVNKRYKRLEIDLDGLYKR 180
            VDLVQNNLNLEVIYGDTDSIMIY+GL+DI KAK+IAG VI+EVNK+Y+ LEIDLDGLYKR
Sbjct: 1032 VDLVQNNLNLEVIYGDTDSIMIYSGLEDITKAKAIAGKVIQEVNKKYRCLEIDLDGLYKR 1091

Query: 181  MXXXXXXXYAAVKEQIRDGKVYKVIERKGLDMVRRDWSLLSKETGDF 321
            M       YAAVK Q +DG  Y+VIERKGLDMVRRDWSLLSKE GDF
Sbjct: 1092 MLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDF 1138


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/107 (76%), Positives = 91/107 (85%)
 Frame = +1

Query: 1    VDLVQNNLNLEVIYGDTDSIMIYTGLDDINKAKSIAGNVIREVNKRYKRLEIDLDGLYKR 180
            VDLVQN LNLEVIYGDTDSIMIY+GLDDI K+K+IA  VI+EVNK+Y+ LEIDLDGLYKR
Sbjct: 1068 VDLVQNLLNLEVIYGDTDSIMIYSGLDDIGKSKAIAAKVIQEVNKKYRCLEIDLDGLYKR 1127

Query: 181  MXXXXXXXYAAVKEQIRDGKVYKVIERKGLDMVRRDWSLLSKETGDF 321
            M       YAAVK Q +DGK Y+VIE+KGLDMVRRDWSLLSKE GDF
Sbjct: 1128 MLLLKKKKYAAVKVQFKDGKPYEVIEKKGLDMVRRDWSLLSKELGDF 1174


Top