BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016621
         (1139 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515739.1| pentatricopeptide repeat-containing protein,...   294   3e-77
ref|NP_180822.1| pentatricopeptide repeat-containing protein [Ar...   286   9e-75
ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containi...   283   7e-74
ref|XP_002879404.1| pentatricopeptide repeat-containing protein ...   281   2e-73
emb|CBI32762.3| unnamed protein product [Vitis vinifera]              280   5e-73

>ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545176|gb|EEF46686.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 613

 Score =  294 bits (752), Expect = 3e-77
 Identities = 170/378 (44%), Positives = 232/378 (61%), Gaps = 18/378 (4%)
 Frame = +1

Query: 58   MSTKALLAAFKKSIPTPQNP--DQRIANLISKSLITS-----QTFHFPPTSLNPNIINLV 216
            M+ + L  AFK+S PT       Q IA  I+K LI S     +T     ++L+    NLV
Sbjct: 1    MANQKLSQAFKRSNPTIPTSILSQEIAEKITKILIKSGLKPLETKSSLLSNLDSYTTNLV 60

Query: 217  LSNTHLPPQSCFN---SLQPN--------NFQPYITLSCRLFKSKDFALAKDVLNQLAIN 363
            LSN +LP +SC N    LQ N        + + ++ L  RLFK++ F + K+VL   A++
Sbjct: 61   LSNPNLPTRSCLNFFKCLQKNQSLICHKPDLRAHVILISRLFKARKFVVMKNVLTCYAMD 120

Query: 364  NHIQQPIHEITSFVNNNGFSKVVVGKLLDTLFRVYADNQRFEESLEVFDYMKSNGFGKID 543
             +++  + +  S ++N       V KL D LFRVY DN  FEE  +VFDYM  NG  KID
Sbjct: 121  KNLRCSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVHNGL-KID 179

Query: 544  DRSCMVFLLAAHRCHKFELLSDFFRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELME 723
            DRSC+V LLA  R  +  +   FF+KMV+  V VTVYSMT+ +  +CK G   +A +LM 
Sbjct: 180  DRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLML 239

Query: 724  EMITRGVRPNANTYNALLDAHLKKSEFRQVEMTLDSMKREGVSRSVATYTLLIELQSMLG 903
            EM  +G++PN  TYN L++A++K  +F  V   L  M+ + V  + ATYTLLIE     G
Sbjct: 240  EMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSG 299

Query: 904  NIEEAEKVFDEMHDKGIAADVYVYTSMISCNCKLGKMKRAFELFDELTERGLVPNIHTYG 1083
             I EAEKVF++M ++G+ AD++V+TS+IS  CKLG MKRAF LFDEL ERGLV N HTYG
Sbjct: 300  KIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYG 359

Query: 1084 VLINGVCKAGEMKAAEAL 1137
             LI+G C +G++ AAE L
Sbjct: 360  ALIHGTCNSGQLDAAEML 377



 Score =  112 bits (281), Expect = 1e-22
 Identities = 64/222 (28%), Positives = 111/222 (50%)
 Frame = +1

Query: 442  LLDTLFRVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMVFLLAAHRCHKFELLSDFFRK 621
            + +TL   Y      +E+L + D M+  GF   D  +         + ++ E    +   
Sbjct: 392  IFNTLINGYCKKGMIDEALRMQDVMEKKGFEN-DIFTYNTIAGGLCKLNRHEEAKRWLFT 450

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            MV+ GV     S T+ +   CK G   +A  + ++M  +G +PN  TYN L+D + KK +
Sbjct: 451  MVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGK 510

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTS 981
             ++     D M+  G++  + TYT L+  + + G +EEA  + +E+  KG+A  +  YT+
Sbjct: 511  LKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTA 570

Query: 982  MISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCK 1107
            +IS   K G+ + AF L+DE+   GL P+   Y  L+  + K
Sbjct: 571  IISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612



 Score =  107 bits (267), Expect = 6e-21
 Identities = 52/169 (30%), Positives = 90/169 (53%)
 Frame = +1

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            M   G    +++       +CKL    +A   +  M+ +GV PNA ++  ++D H K+  
Sbjct: 416  MEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGN 475

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTS 981
              + E     MK++G   +V TY  LI+  S  G ++EA ++ DEM   G+ +D+Y YT+
Sbjct: 476  LVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTT 535

Query: 982  MISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAA 1128
            ++   C  GK++ A  L +E+  +GL  +I TY  +I+G+ K G  + A
Sbjct: 536  LVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEA 584



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 52/173 (30%), Positives = 90/173 (52%)
 Frame = +1

Query: 613  FRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLK 792
            F KM++ GV   ++  T  +S  CKLG   +A  L +E+  RG+  NA+TY AL+     
Sbjct: 308  FEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCN 367

Query: 793  KSEFRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYV 972
              +    EM ++ M+ +G+  ++  +  LI      G I+EA ++ D M  KG   D++ 
Sbjct: 368  SGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFT 427

Query: 973  YTSMISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAAE 1131
            Y ++    CKL + + A      + E+G+ PN  ++ ++I+  CK G +  AE
Sbjct: 428  YNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAE 480



 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 49/173 (28%), Positives = 90/173 (52%)
 Frame = +1

Query: 619  KMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKS 798
            +M   G+ + +      ++  CK G   +A  + + M  +G   +  TYN +     K +
Sbjct: 380  EMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLN 439

Query: 799  EFRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYT 978
               + +  L +M  +GV  +  ++T++I++    GN+ EAE+VF +M  KG   +V  Y 
Sbjct: 440  RHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYN 499

Query: 979  SMISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAAEAL 1137
            ++I    K GK+K A+ L DE+   G+  +I+TY  L++G C  G+++ A  L
Sbjct: 500  TLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTL 552


>ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g32630 gi|20197234|gb|AAM14987.1| putative
            salt-inducible protein [Arabidopsis thaliana]
            gi|330253613|gb|AEC08707.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  286 bits (731), Expect = 9e-75
 Identities = 161/383 (42%), Positives = 235/383 (61%), Gaps = 18/383 (4%)
 Frame = +1

Query: 43   SSTLNMSTKALLAAFKKSIPTPQNPDQRIANLISKSLITSQTF---HFPPT---SLNPNI 204
            SS+  +S    +    +  P   + DQ  A  I+  L+   T       P+   +LN N+
Sbjct: 5    SSSRKLSRLFNIVTQNQKSPVLLSSDQEAARRITACLVEKSTIGKLQSNPSLLFNLNSNV 64

Query: 205  INLVLSNTHLPPQSCFNSLQ-----PNNFQP----YITLSCRLFKSKDFALAKDVLNQLA 357
              LVLS   LP QSC +  +      +N +P     +TLS RL+ ++ F   + +LN + 
Sbjct: 65   TRLVLSEPTLPTQSCIDFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVV 124

Query: 358  INNHIQQPIHEITSFVNNNGFSKV---VVGKLLDTLFRVYADNQRFEESLEVFDYMKSNG 528
             +   ++P+ E+ S + +   S+       K  D +FRVY DN  FEE L VFDYM   G
Sbjct: 125  NDGFYKRPVEELGSAMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKG 184

Query: 529  FGKIDDRSCMVFLLAAHRCHKFELLSDFFRKMVDSGVGVTVYSMTMAVSAMCKLGETSKA 708
               ID+RSC+VFL+AA +  + +L  + FR+MVDSGV +TVYS+T+ V  +C+ GE  K+
Sbjct: 185  LS-IDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS 243

Query: 709  NELMEEMITRGVRPNANTYNALLDAHLKKSEFRQVEMTLDSMKREGVSRSVATYTLLIEL 888
             +L++E   +G++P A TYN +++A++K+ +F  VE  L  MK++GV  +  TYTLL+EL
Sbjct: 244  KKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMEL 303

Query: 889  QSMLGNIEEAEKVFDEMHDKGIAADVYVYTSMISCNCKLGKMKRAFELFDELTERGLVPN 1068
                G + +AEK+FDEM ++GI +DV+VYTS+IS NC+ G MKRAF LFDELTE+GL P+
Sbjct: 304  SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363

Query: 1069 IHTYGVLINGVCKAGEMKAAEAL 1137
             +TYG LI+GVCK GEM AAE L
Sbjct: 364  SYTYGALIDGVCKVGEMGAAEIL 386



 Score =  115 bits (287), Expect = 3e-23
 Identities = 65/220 (29%), Positives = 112/220 (50%)
 Frame = +1

Query: 442  LLDTLFRVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMVFLLAAHRCHKFELLSDFFRK 621
            + +TL   Y      +E+  ++D M+  GF + D  +C       +R  +++    +  +
Sbjct: 401  VFNTLIDGYCRKGMVDEASMIYDVMEQKGF-QADVFTCNTIASCFNRLKRYDEAKQWLFR 459

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            M++ GV ++  S T  +   CK G   +A  L  EM ++GV+PNA TYN ++ A+ K+ +
Sbjct: 460  MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTS 981
             ++      +M+  G+     TYT LI  + +  N++EA ++F EM  KG+  +   YT 
Sbjct: 520  IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579

Query: 982  MISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGV 1101
            MIS   K GK   AF L+DE+  +G   +   Y  LI  +
Sbjct: 580  MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619



 Score =  106 bits (265), Expect = 9e-21
 Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 3/240 (1%)
 Frame = +1

Query: 427  VVVGKLLDTLF-RVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMVFLLAAHRCHKFELL 603
            VV  K+  TL   +   N +  ++ ++FD M+  G   I+    +   L +  C K  + 
Sbjct: 290  VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG---IESDVHVYTSLISWNCRKGNMK 346

Query: 604  SDF--FRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALL 777
              F  F ++ + G+  + Y+    +  +CK+GE   A  LM EM ++GV      +N L+
Sbjct: 347  RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406

Query: 778  DAHLKKSEFRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIA 957
            D + +K    +  M  D M+++G    V T   +    + L   +EA++    M + G+ 
Sbjct: 407  DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466

Query: 958  ADVYVYTSMISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAAEAL 1137
                 YT++I   CK G ++ A  LF E++ +G+ PN  TY V+I   CK G++K A  L
Sbjct: 467  LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526


>ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32630-like
            [Vitis vinifera]
          Length = 625

 Score =  283 bits (723), Expect = 7e-74
 Identities = 168/394 (42%), Positives = 246/394 (62%), Gaps = 34/394 (8%)
 Frame = +1

Query: 58   MSTKALLAAFKKSIPTPQNP----DQRIANLISKSLITS-----QTFHFPPTSLNPNIIN 210
            MST  + +  KK+  +  NP    +Q IA  ISK+L++S     QT     +SLN   ++
Sbjct: 1    MSTPKMWSNLKKAFSS--NPSLKLNQEIAGKISKTLVSSGAKSLQTTPSLLSSLNSQTVH 58

Query: 211  LVLSNTHLPPQSC---FNSLQPNNFQP----YITL---------SCRLFKSKDFALAKDV 342
            L+LSN  L  +SC   F+ ++ N ++P    YITL         S +L KS+ FA  + +
Sbjct: 59   LILSNHILTAESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHL 118

Query: 343  LNQLAINNHIQQPIHEITSFV---------NNNGFSKVVVGKLLDTLFRVYADNQRFEES 495
             N  A+++ ++ P+  I S V         N   F +    K  D LFRVYADN+ F E+
Sbjct: 119  FNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKE----KFFDLLFRVYADNKMFGEA 174

Query: 496  LEVFDYMKSNGFGKIDDRSCMVFLLAAHRCHKFELLSDFFRKMVDSGVGVTVYSMTMAVS 675
            LE F++M+  GF  ID+RSC+V+LLA  R  + +    FFR+MV+  V VTVYS+T+ + 
Sbjct: 175  LEAFEHMEKKGF-HIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD 233

Query: 676  AMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSEFRQVEMTLDSMKREGVSR 855
             +CK G+     +LM+E+  +GV+ N  TYNA ++ + K+ +   V   L  M++EGV+ 
Sbjct: 234  GLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVAC 293

Query: 856  SVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTSMISCNCKLGKMKRAFELF 1035
            +V TYTLLI   S +G IEEA+++F+EM +KGI ADVYVYTS+ISCNC+ G +KRA  LF
Sbjct: 294  NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 353

Query: 1036 DELTERGLVPNIHTYGVLINGVCKAGEMKAAEAL 1137
            DE+T++GL+P+ HTYG LI+GVCKAG+M+AA+ L
Sbjct: 354  DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQML 387



 Score =  122 bits (305), Expect = 2e-25
 Identities = 61/169 (36%), Positives = 98/169 (57%)
 Frame = +1

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            M   G+   V++     S +CKL    +A  L+  M+ RGV PN  ++  L+D + K+  
Sbjct: 426  MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 485

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTS 981
            F + +     M+ +G   ++ TY +LI+  S  GN++EA K+ DE+ ++G+  DVY  TS
Sbjct: 486  FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 545

Query: 982  MISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAA 1128
            +I   C  GK+  A +LFDE+ +RGLVPN+ TY  +I+G+ K G  + A
Sbjct: 546  LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 594



 Score =  104 bits (259), Expect = 5e-20
 Identities = 64/223 (28%), Positives = 108/223 (48%)
 Frame = +1

Query: 442  LLDTLFRVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMVFLLAAHRCHKFELLSDFFRK 621
            + +TL   Y ++   +E+L +   M+  G  + D  +         + ++ +        
Sbjct: 402  IFNTLIDGYCESGMVDEALRLQVVMEKKGL-ESDVFAYNSIASGLCKLNRKDEAKGLLFS 460

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            MV+ GV     S T  +   CK G   +A  +  EM  +G  PN  TYN L+D + K+  
Sbjct: 461  MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN 520

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTS 981
             ++     D ++  G+   V T T LI  + + G ++ A K+FDEM  +G+  +V  YT+
Sbjct: 521  MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 580

Query: 982  MISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKA 1110
            MIS   K G+ + AF+L+DE+ E GL P+   Y  L+  +  A
Sbjct: 581  MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623



 Score =  100 bits (249), Expect = 7e-19
 Identities = 55/181 (30%), Positives = 92/181 (50%)
 Frame = +1

Query: 589  KFELLSDFFRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYN 768
            K E     F +M + G+   VY  T  +S  C+ G   +A  L +EM  +G+ P+A+TY 
Sbjct: 310  KIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG 369

Query: 769  ALLDAHLKKSEFRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDK 948
            AL+    K  +    +M ++ M+ +G+  +   +  LI+     G ++EA ++   M  K
Sbjct: 370  ALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKK 429

Query: 949  GIAADVYVYTSMISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAA 1128
            G+ +DV+ Y S+ S  CKL +   A  L   + ERG+ PN  ++  LI+  CK G    A
Sbjct: 430  GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEA 489

Query: 1129 E 1131
            +
Sbjct: 490  K 490



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 35/284 (12%)
 Frame = +1

Query: 382  IHEITSFVNNNGFSKVVVGKLLDTLFRVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMV 561
            + EI + +   G +  VV   L  L   +++  + EE+  +F+ M+  G  + D      
Sbjct: 279  VAEILTLMEKEGVACNVVTYTL--LIHGFSNIGKIEEAQRLFEEMREKGI-EADVYVYTS 335

Query: 562  FLLAAHRCHKFELLSDFFRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRG 741
             +    R    +     F +M D G+  + ++    +  +CK G+   A  L+ EM  +G
Sbjct: 336  IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 395

Query: 742  VRPNANTYNALLDAHLKKS---EFRQVEMTLD---------------------------- 828
            +  N   +N L+D + +     E  ++++ ++                            
Sbjct: 396  IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 455

Query: 829  ----SMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTSMISCN 996
                SM   GVS +  ++T LI++    GN  EA++VF EM +KG   ++  Y  +I   
Sbjct: 456  GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 515

Query: 997  CKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAA 1128
             K G MK A +L DEL  RGL+P+++T   LI+G C  G++  A
Sbjct: 516  SKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMA 559


>ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297325243|gb|EFH55663.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 605

 Score =  281 bits (719), Expect = 2e-73
 Identities = 149/329 (45%), Positives = 216/329 (65%), Gaps = 12/329 (3%)
 Frame = +1

Query: 187  SLNPNIINLVLSNTHLPPQSCFNSLQ-----PNNFQP----YITLSCRLFKSKDFALAKD 339
            +LN N+  LVLS+  L  QSC +  +      +N +P     +TLS RL+ ++ F+  + 
Sbjct: 40   NLNSNVTRLVLSDPSLATQSCIDFFKFLREFESNLKPDLTAVVTLSHRLYSNRRFSEMRL 99

Query: 340  VLNQLAINNHIQQPIHEITSFVNNNGFSKVVVG---KLLDTLFRVYADNQRFEESLEVFD 510
            +LN +  +   ++P+  + S + +   S+       K  D +FRVY DN  FEE L VFD
Sbjct: 100  LLNSVVNDGFYERPVEGLGSAMVDCDISEEKFEFWEKFFDLVFRVYVDNGMFEEGLRVFD 159

Query: 511  YMKSNGFGKIDDRSCMVFLLAAHRCHKFELLSDFFRKMVDSGVGVTVYSMTMAVSAMCKL 690
            YM   G   ID+RSC+VFL+AA +  + +L  +FFR+MVDSGV +TVYS+T+ V  +C+ 
Sbjct: 160  YMVKKGLS-IDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRR 218

Query: 691  GETSKANELMEEMITRGVRPNANTYNALLDAHLKKSEFRQVEMTLDSMKREGVSRSVATY 870
            GE  K+ +L++E   +G++P A TYN +++A+LK  +F  VE  L  MK++GV  +  TY
Sbjct: 219  GEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTY 278

Query: 871  TLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTSMISCNCKLGKMKRAFELFDELTE 1050
            TLLIEL    G + + EK+FDEM ++GI +D++VYTS+IS NC+ G +KRAF LFDELTE
Sbjct: 279  TLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTE 338

Query: 1051 RGLVPNIHTYGVLINGVCKAGEMKAAEAL 1137
            +GL+P+ HTYG LI+GVCK GEM AAE L
Sbjct: 339  KGLLPSSHTYGALIDGVCKVGEMGAAEIL 367



 Score =  114 bits (285), Expect = 5e-23
 Identities = 65/220 (29%), Positives = 111/220 (50%)
 Frame = +1

Query: 442  LLDTLFRVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMVFLLAAHRCHKFELLSDFFRK 621
            + +TL   Y      +E+  ++D M+  GF + D  +C       +R  +++    +  +
Sbjct: 382  VFNTLINGYCRKGMIDEASMIYDVMEKKGF-QADVFTCNTIASCFNRLKRYDEAKQWLFR 440

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            M++ GV ++  S T  +   CK G   +A  L  EM ++ V+PNA TYN ++ A+ K+ +
Sbjct: 441  MMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGK 500

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTS 981
             ++      +MK  G+     TYT LI  + +  N++EA ++F EM  KG+  +   YT 
Sbjct: 501  VKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 560

Query: 982  MISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGV 1101
            MIS   K GK   AF L+DE+  +G   +   Y  LI  +
Sbjct: 561  MISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSM 600



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 37/267 (13%)
 Frame = +1

Query: 448  DTLFRVYADNQRFEESLEVFDYMKSNG--FGKIDDRSCMVFLLAAHRCHKFELLSDFFRK 621
            +T+   Y  ++ F    ++   MK +G  + K+   +  + +  + +  K   +   F +
Sbjct: 244  NTIINAYLKHRDFSGVEKILKVMKKDGVVYNKV---TYTLLIELSVKNGKMNDVEKLFDE 300

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            M + G+   ++  T  +S  C+ G   +A  L +E+  +G+ P+++TY AL+D   K  E
Sbjct: 301  MRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGE 360

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYV--- 972
                E+ ++ M+ +GV+ +   +  LI      G I+EA  ++D M  KG  ADV+    
Sbjct: 361  MGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNT 420

Query: 973  --------------------------------YTSMISCNCKLGKMKRAFELFDELTERG 1056
                                            YT++I   CK G ++ A  LF E++ + 
Sbjct: 421  IASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKE 480

Query: 1057 LVPNIHTYGVLINGVCKAGEMKAAEAL 1137
            + PN  TY V+I   CK G++K A  L
Sbjct: 481  VQPNAITYNVMIYAYCKQGKVKEARKL 507



 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
 Frame = +1

Query: 427  VVVGKLLDTLF-RVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMVFLLAAHRCHKFELL 603
            VV  K+  TL   +   N +  +  ++FD M+  G   I+    +   L +  C K  + 
Sbjct: 271  VVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERG---IESDIHVYTSLISWNCRKGNIK 327

Query: 604  SDF--FRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALL 777
              F  F ++ + G+  + ++    +  +CK+GE   A  LM EM ++GV      +N L+
Sbjct: 328  RAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 387

Query: 778  DAHLKKSEFRQVEMTLDSMKREG-----------------------------------VS 852
            + + +K    +  M  D M+++G                                   V 
Sbjct: 388  NGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVR 447

Query: 853  RSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTSMISCNCKLGKMKRAFEL 1032
             S  +YT LI++    GN+EEA+++F EM  K +  +   Y  MI   CK GK+K A +L
Sbjct: 448  LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKL 507

Query: 1033 FDELTERGLVPNIHTYGVLINGVCKAGEMKAAEAL 1137
            +  +   G+ P+ +TY  LI+G C A  +  A  L
Sbjct: 508  WANMKANGMDPDSYTYTSLIHGECIADNVDEAMRL 542


>emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  280 bits (716), Expect = 5e-73
 Identities = 161/370 (43%), Positives = 235/370 (63%), Gaps = 30/370 (8%)
 Frame = +1

Query: 118  DQRIANLISKSLITS-----QTFHFPPTSLNPNIINLVLSNTHLPPQSC---FNSLQPNN 273
            +Q IA  ISK+L++S     QT     +SLN   ++L+LSN  L  +SC   F+ ++ N 
Sbjct: 27   NQEIAGKISKTLVSSGAKSLQTTPSLLSSLNSQTVHLILSNHILTAESCLDFFHFIRKNY 86

Query: 274  FQP----YITL---------SCRLFKSKDFALAKDVLNQLAINNHIQQPIHEITSFV--- 405
            ++P    YITL         S +L KS+ FA  + + N  A+++ ++ P+  I S V   
Sbjct: 87   YKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDA 146

Query: 406  ------NNNGFSKVVVGKLLDTLFRVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMVFL 567
                  N   F +    K  D LFRVYADN+ F E+LE F++M+  GF  ID+RSC+V+L
Sbjct: 147  CNESKCNRAKFKE----KFFDLLFRVYADNKMFGEALEAFEHMEKKGF-HIDERSCLVYL 201

Query: 568  LAAHRCHKFELLSDFFRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVR 747
            LA  R  + +    FFR+MV+  V VTVYS+T+ +  +CK G+     +LM+E+  +GV+
Sbjct: 202  LALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVK 261

Query: 748  PNANTYNALLDAHLKKSEFRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKV 927
             N  TYNA ++ + K+ +   V   L  M++EGV+ +V TYTLLI   S +G IEEA+++
Sbjct: 262  ANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRL 321

Query: 928  FDEMHDKGIAADVYVYTSMISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCK 1107
            F+EM +KGI ADVYVYTS+ISCNC+ G +KRA  LFDE+T++GL+P+ HTYG LI+GVCK
Sbjct: 322  FEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 381

Query: 1108 AGEMKAAEAL 1137
            AG+M+AA+ L
Sbjct: 382  AGQMEAAQML 391



 Score =  122 bits (305), Expect = 2e-25
 Identities = 61/169 (36%), Positives = 98/169 (57%)
 Frame = +1

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            M   G+   V++     S +CKL    +A  L+  M+ RGV PN  ++  L+D + K+  
Sbjct: 430  MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 489

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTS 981
            F + +     M+ +G   ++ TY +LI+  S  GN++EA K+ DE+ ++G+  DVY  TS
Sbjct: 490  FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 549

Query: 982  MISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAA 1128
            +I   C  GK+  A +LFDE+ +RGLVPN+ TY  +I+G+ K G  + A
Sbjct: 550  LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 598



 Score =  105 bits (263), Expect = 2e-20
 Identities = 65/225 (28%), Positives = 109/225 (48%)
 Frame = +1

Query: 442  LLDTLFRVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMVFLLAAHRCHKFELLSDFFRK 621
            + +TL   Y ++   +E+L +   M+  G  + D  +         + ++ +        
Sbjct: 406  IFNTLIDGYCESGMVDEALRLQVVMEKKGL-ESDVFAYNSIASGLCKLNRKDEAKGLLFS 464

Query: 622  MVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYNALLDAHLKKSE 801
            MV+ GV     S T  +   CK G   +A  +  EM  +G  PN  TYN L+D + K+  
Sbjct: 465  MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN 524

Query: 802  FRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTS 981
             ++     D ++  G+   V T T LI  + + G ++ A K+FDEM  +G+  +V  YT+
Sbjct: 525  MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 584

Query: 982  MISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGE 1116
            MIS   K G+ + AF+L+DE+ E GL P+   Y  L+  +  A E
Sbjct: 585  MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADE 629



 Score =  100 bits (249), Expect = 7e-19
 Identities = 55/181 (30%), Positives = 92/181 (50%)
 Frame = +1

Query: 589  KFELLSDFFRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRGVRPNANTYN 768
            K E     F +M + G+   VY  T  +S  C+ G   +A  L +EM  +G+ P+A+TY 
Sbjct: 314  KIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG 373

Query: 769  ALLDAHLKKSEFRQVEMTLDSMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDK 948
            AL+    K  +    +M ++ M+ +G+  +   +  LI+     G ++EA ++   M  K
Sbjct: 374  ALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKK 433

Query: 949  GIAADVYVYTSMISCNCKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAA 1128
            G+ +DV+ Y S+ S  CKL +   A  L   + ERG+ PN  ++  LI+  CK G    A
Sbjct: 434  GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEA 493

Query: 1129 E 1131
            +
Sbjct: 494  K 494



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 35/284 (12%)
 Frame = +1

Query: 382  IHEITSFVNNNGFSKVVVGKLLDTLFRVYADNQRFEESLEVFDYMKSNGFGKIDDRSCMV 561
            + EI + +   G +  VV   L  L   +++  + EE+  +F+ M+  G  + D      
Sbjct: 283  VAEILTLMEKEGVACNVVTYTL--LIHGFSNIGKIEEAQRLFEEMREKGI-EADVYVYTS 339

Query: 562  FLLAAHRCHKFELLSDFFRKMVDSGVGVTVYSMTMAVSAMCKLGETSKANELMEEMITRG 741
             +    R    +     F +M D G+  + ++    +  +CK G+   A  L+ EM  +G
Sbjct: 340  IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 399

Query: 742  VRPNANTYNALLDAHLKKS---EFRQVEMTLD---------------------------- 828
            +  N   +N L+D + +     E  ++++ ++                            
Sbjct: 400  IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 459

Query: 829  ----SMKREGVSRSVATYTLLIELQSMLGNIEEAEKVFDEMHDKGIAADVYVYTSMISCN 996
                SM   GVS +  ++T LI++    GN  EA++VF EM +KG   ++  Y  +I   
Sbjct: 460  GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 519

Query: 997  CKLGKMKRAFELFDELTERGLVPNIHTYGVLINGVCKAGEMKAA 1128
             K G MK A +L DEL  RGL+P+++T   LI+G C  G++  A
Sbjct: 520  SKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMA 563