BLASTX nr result

ID: Atractylodes21_contig00016566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016566
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36857.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002268579.1| PREDICTED: uncharacterized protein LOC100267...    74   2e-11
ref|XP_002523069.1| DNA binding protein, putative [Ricinus commu...    70   1e-10
ref|NP_850478.1| RING/U-box domain-containing protein [Arabidops...    70   2e-10
ref|XP_002882128.1| zinc finger family protein [Arabidopsis lyra...    70   2e-10

>emb|CBI36857.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = -2

Query: 149 DCLGSAFNTKGTMQCPNCRKFESCRWLFGDGSTHAISEIDEQDWMPDE 6
           DC+GSAFN KG MQCPNCRK E  RWLF +GS  +  E    DW PDE
Sbjct: 49  DCIGSAFNMKGAMQCPNCRKIERGRWLFANGSARSFPEFSMDDWTPDE 96


>ref|XP_002268579.1| PREDICTED: uncharacterized protein LOC100267498 [Vitis vinifera]
          Length = 407

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = -2

Query: 149 DCLGSAFNTKGTMQCPNCRKFESCRWLFGDGSTHAISEIDEQDWMPDE 6
           DC+GSAFN KG MQCPNCRK E  RWLF +GS  +  E    DW PDE
Sbjct: 59  DCIGSAFNMKGAMQCPNCRKIERGRWLFANGSARSFPEFSMDDWTPDE 106


>ref|XP_002523069.1| DNA binding protein, putative [Ricinus communis]
           gi|223537631|gb|EEF39254.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 430

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = -2

Query: 149 DCLGSAFNTKGTMQCPNCRKFESCRWLFGDGSTHAISEIDEQDWMPDE 6
           DC+GSAFN KG MQCPNCRK E  +WL+ +GS   + E+   DW+P+E
Sbjct: 78  DCIGSAFNMKGAMQCPNCRKVEKGQWLYANGSNRMLPEMSMDDWIPEE 125


>ref|NP_850478.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|20197309|gb|AAC63626.2| unknown protein [Arabidopsis
           thaliana] gi|27311613|gb|AAO00772.1| unknown protein
           [Arabidopsis thaliana] gi|31711856|gb|AAP68284.1|
           At2g47700 [Arabidopsis thaliana]
           gi|70905099|gb|AAZ14075.1| At2g47700 [Arabidopsis
           thaliana] gi|330255784|gb|AEC10878.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 358

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = -2

Query: 149 DCLGSAFNTKGTMQCPNCRKFESCRWLFGDGSTHAISEIDEQDWMPDE 6
           DC+GSAFN KG MQCPNCR  E  +WL+ +GST    E   +DW+P+E
Sbjct: 65  DCIGSAFNMKGAMQCPNCRNVEKGQWLYANGSTRPFPEFSMEDWIPEE 112


>ref|XP_002882128.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327967|gb|EFH58387.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 351

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = -2

Query: 149 DCLGSAFNTKGTMQCPNCRKFESCRWLFGDGSTHAISEIDEQDWMPDE 6
           DC+GSAFN KG MQCPNCR  E  +WL+ +GST    E   +DW+P+E
Sbjct: 65  DCIGSAFNMKGAMQCPNCRNVEKGQWLYANGSTRPFPEFSMEDWIPEE 112


Top