BLASTX nr result

ID: Atractylodes21_contig00016531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016531
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife...   176   2e-42
ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm...   169   2e-40
ref|XP_002299213.1| f-box family protein [Populus trichocarpa] g...   169   3e-40
gb|AFK33567.1| unknown [Lotus japonicus]                              168   5e-40
ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi...   167   6e-40

>ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera]
           gi|297742690|emb|CBI35143.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  176 bits (445), Expect = 2e-42
 Identities = 89/116 (76%), Positives = 100/116 (86%)
 Frame = -1

Query: 515 SALEFLSTCKLAKLTVKAELGCCLLHRSGRLIIEDCNLQCESNPLDYLSYAIITTAGGCE 336
           SALEFLSTCK+A LTVKAELGCCLLHRSGRL I+ C LQCESNPLDYLS  I++TA G E
Sbjct: 139 SALEFLSTCKVANLTVKAELGCCLLHRSGRLTIDGCILQCESNPLDYLSCPIVSTAAGPE 198

Query: 335 ALPSATKRNGDSVSVSQTRIKGGAKAVLTSGTLALQQVRVIYAPTSILFWFDVVHR 168
            L S+ K +GDSVSVS+TRI+GGAKAV+TSG+LALQ+VRVIYA TSI FWFDV  R
Sbjct: 199 ILTSSVKSHGDSVSVSRTRIEGGAKAVVTSGSLALQRVRVIYARTSIFFWFDVDRR 254


>ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis]
           gi|223548087|gb|EEF49579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  169 bits (428), Expect = 2e-40
 Identities = 84/116 (72%), Positives = 97/116 (83%)
 Frame = -1

Query: 515 SALEFLSTCKLAKLTVKAELGCCLLHRSGRLIIEDCNLQCESNPLDYLSYAIITTAGGCE 336
           SALEFLSTCKLA LTVKAELGCCLLHRSG+L I+ C LQCES+PLDYLS  I++TAG  E
Sbjct: 135 SALEFLSTCKLANLTVKAELGCCLLHRSGKLTIDSCVLQCESDPLDYLSCPIVSTAGKHE 194

Query: 335 ALPSATKRNGDSVSVSQTRIKGGAKAVLTSGTLALQQVRVIYAPTSILFWFDVVHR 168
            L +  K NGDSV+VSQTRI+GGAKAVLT+G L LQ+VRVIY+ T + FWFDV H+
Sbjct: 195 VLSAPMKTNGDSVTVSQTRIEGGAKAVLTNGDLVLQRVRVIYSRTYVYFWFDVGHK 250


>ref|XP_002299213.1| f-box family protein [Populus trichocarpa]
           gi|222846471|gb|EEE84018.1| f-box family protein
           [Populus trichocarpa]
          Length = 251

 Score =  169 bits (427), Expect = 3e-40
 Identities = 84/113 (74%), Positives = 95/113 (84%)
 Frame = -1

Query: 515 SALEFLSTCKLAKLTVKAELGCCLLHRSGRLIIEDCNLQCESNPLDYLSYAIITTAGGCE 336
           SALEF++TCKLA LTVKAELGCCLLHRSGRL I+ C LQCE++PLDYLS  II+TAGG E
Sbjct: 136 SALEFITTCKLANLTVKAELGCCLLHRSGRLTIDSCILQCEASPLDYLSCPIISTAGGNE 195

Query: 335 ALPSATKRNGDSVSVSQTRIKGGAKAVLTSGTLALQQVRVIYAPTSILFWFDV 177
            + SA K  G+ +SVSQTRI+GGAKAVLTSG L LQQVRVIYA T + FWFDV
Sbjct: 196 VVSSAVKTKGNRISVSQTRIEGGAKAVLTSGDLTLQQVRVIYARTFVYFWFDV 248


>gb|AFK33567.1| unknown [Lotus japonicus]
          Length = 268

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/115 (74%), Positives = 95/115 (82%), Gaps = 2/115 (1%)
 Frame = -1

Query: 515 SALEFLSTCKLAKLTVKAELGCCLLHRSGRLIIEDCNLQCESNPLDYLSYAIITTAGGCE 336
           SALE LSTCKLA LTVKAELGCCLLHR GRL ++ C LQCESNPLD+LS  I++TA   E
Sbjct: 151 SALELLSTCKLANLTVKAELGCCLLHRKGRLTVDGCILQCESNPLDFLSCPIVSTANSSE 210

Query: 335 ALPSATKRN--GDSVSVSQTRIKGGAKAVLTSGTLALQQVRVIYAPTSILFWFDV 177
            LPS TK N  GD V VSQTRI+GGAKAV+TSG LALQ+VRVIYA TS+LFWFDV
Sbjct: 211 VLPSQTKSNGGGDGVFVSQTRIEGGAKAVVTSGDLALQRVRVIYARTSLLFWFDV 265


>ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum]
           gi|15777895|gb|AAL05932.1| SKIP5-like protein [Solanum
           lycopersicum]
          Length = 265

 Score =  167 bits (424), Expect = 6e-40
 Identities = 81/113 (71%), Positives = 96/113 (84%)
 Frame = -1

Query: 515 SALEFLSTCKLAKLTVKAELGCCLLHRSGRLIIEDCNLQCESNPLDYLSYAIITTAGGCE 336
           SALEF+STCKLA LTV+ ELGCCLLHRSG+L ++ C LQCESNPLD+LSYAII+TAG  E
Sbjct: 135 SALEFMSTCKLANLTVRTELGCCLLHRSGKLTVDGCILQCESNPLDHLSYAIISTAGAAE 194

Query: 335 ALPSATKRNGDSVSVSQTRIKGGAKAVLTSGTLALQQVRVIYAPTSILFWFDV 177
            +PSA K   D+VSV +T+I GGAKAVLTSGTL+LQ+VRVIY  TS+ FWF+V
Sbjct: 195 VIPSALKTCSDAVSVLKTQIAGGAKAVLTSGTLSLQRVRVIYTRTSLFFWFEV 247


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