BLASTX nr result

ID: Atractylodes21_contig00016527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016527
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   299   9e-79
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              297   3e-78
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   291   3e-76
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   283   5e-74
ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|2...   279   1e-72

>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  299 bits (766), Expect = 9e-79
 Identities = 152/229 (66%), Positives = 176/229 (76%)
 Frame = +3

Query: 171 MGDSYWKYAAAEGRXXXXXXXPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVVK 350
           M D+YW+Y    G         L  ++GKR RSDYDVP G +LPSYF+R+DERGT   ++
Sbjct: 1   MADAYWRY----GDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMR 56

Query: 351 DSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAATT 530
           D+D+IGASYDRYLR  Q  SYGG +S RP+S G+  R  ++ R++GMG   ++PA   T 
Sbjct: 57  DTDSIGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMG--SVEPAT--TV 112

Query: 531 KGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRH 710
           K R  G  GGR E+ LPPDAS+TLFVEGLPSNC+RREVAHIFRPFVGYKEVRLV+KESRH
Sbjct: 113 KDRTLGYGGGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRH 172

Query: 711 SSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 857
             GDPLVLCFVDF SPA AATA DALQGYKFDEHDRDSVSLRLQFARYP
Sbjct: 173 PGGDPLVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQFARYP 221


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  297 bits (761), Expect = 3e-78
 Identities = 151/229 (65%), Positives = 174/229 (75%)
 Frame = +3

Query: 171 MGDSYWKYAAAEGRXXXXXXXPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVVK 350
           M D YW+Y             P+  L  KRPRSDYDVPGG DLPSYF+REDER  H  ++
Sbjct: 1   MADPYWRYGEVR------QPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIR 54

Query: 351 DSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAATT 530
           DSD+IGASYDRYLR  Q PSYGG +S RP+S G+     ++ R++G+   G+D    AT 
Sbjct: 55  DSDSIGASYDRYLRNAQMPSYGG-DSGRPLSGGITSHPVDDPRVVGVR--GVDQG--ATV 109

Query: 531 KGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRH 710
           K +  G  GGR E+ LPPDAS+TLFVEGLP+NC+RREV+HIFRPFVGYKEVRLV+KESRH
Sbjct: 110 KSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRH 169

Query: 711 SSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 857
           S GDPLVLCFVDF SPA AATA DALQGYKFDEHDRDSV+LRLQFARYP
Sbjct: 170 SGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYP 218


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  291 bits (744), Expect = 3e-76
 Identities = 150/229 (65%), Positives = 173/229 (75%)
 Frame = +3

Query: 171 MGDSYWKYAAAEGRXXXXXXXPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVVK 350
           M D YW+Y             P+  L  KRPRSDYDVPGG DLPSYF+REDER  H  ++
Sbjct: 1   MADPYWRYGEVR------QPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIR 54

Query: 351 DSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAATT 530
           DSD+IGASYDRYLR    PSYGG +S RP+S G+     ++ R++G+   G+D    AT 
Sbjct: 55  DSDSIGASYDRYLRNAM-PSYGG-DSGRPLSGGITSHPVDDPRVVGVR--GVDQG--ATV 108

Query: 531 KGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRH 710
           K +  G  GGR E+ LPPDAS+TLFVEGLP+NC+RREV+HIFRPFVGYKEVRLV+KESRH
Sbjct: 109 KSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRH 168

Query: 711 SSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 857
           S GDPLVLCFVDF SPA AATA DALQGYKFDEHDRDSV+LRLQFARYP
Sbjct: 169 SGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYP 217


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score =  283 bits (725), Expect = 5e-74
 Identities = 145/229 (63%), Positives = 172/229 (75%)
 Frame = +3

Query: 171 MGDSYWKYAAAEGRXXXXXXXPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVVK 350
           M D+YW+Y+ A          P+  L+GKR RSDYDV  G +LP+Y+ R+D+RG    ++
Sbjct: 1   MADAYWRYSDAR----QPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIR 56

Query: 351 DSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAATT 530
           D+D+IGASYDRYLR     SY G +S RP+S G+  R+ ++ R+MG  +GGLDP    T 
Sbjct: 57  DTDSIGASYDRYLRSAPISSYSGGQSARPIS-GVPNRVADDPRIMG--IGGLDPG--PTV 111

Query: 531 KGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRH 710
           K R  G+  GR E SLPPDA++TLFVEGLPS+CSRREVAHIFRPFVGYKEVRLV+KESR 
Sbjct: 112 KDRTLGLGSGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRR 171

Query: 711 SSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 857
             GDPLVLCFVDF SPA AATA DALQGYKFDEHDRDSV LRLQFARYP
Sbjct: 172 PGGDPLVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRLQFARYP 220


>ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|222858470|gb|EEE96017.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  279 bits (714), Expect = 1e-72
 Identities = 145/229 (63%), Positives = 171/229 (74%)
 Frame = +3

Query: 171 MGDSYWKYAAAEGRXXXXXXXPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVVK 350
           M DSYW+YA   G         +  L GKRPR DYD+P G DL SY++R+D+RG   V++
Sbjct: 1   MADSYWRYA---GDSRQQPPQSMSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVIR 57

Query: 351 DSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAATT 530
           DSD+IGASYDRYLR     SYGG +S R MS G+     +++RM+ MG   +DP   A+ 
Sbjct: 58  DSDSIGASYDRYLRSGTVSSYGGGQSARAMS-GVPSHPVDDTRMVSMG--PMDPG--ASV 112

Query: 531 KGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRH 710
           K R   M  GR+E+SLPPDAS+TLFVEGLPS+C+RREV+HIFRPFVGYKEVRLV+KESRH
Sbjct: 113 KDRSLRMGSGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRH 172

Query: 711 SSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 857
             GDPLVLCFVDF SPA AATA DALQGY+FDEHDRDS  LRLQFARYP
Sbjct: 173 PGGDPLVLCFVDFLSPAHAATAMDALQGYRFDEHDRDSFHLRLQFARYP 221


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