BLASTX nr result

ID: Atractylodes21_contig00016518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016518
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arab...    73   2e-11
ref|NP_973399.1| F-box protein [Arabidopsis thaliana] gi|1222136...    71   8e-11
ref|XP_002876808.1| hypothetical protein ARALYDRAFT_904457 [Arab...    64   1e-08
ref|XP_002512468.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_002876807.1| phloem protein 2-B2 [Arabidopsis lyrata subs...    62   5e-08

>ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arabidopsis lyrata subsp.
           lyrata] gi|297322644|gb|EFH53065.1| hypothetical protein
           ARALYDRAFT_322561 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/118 (40%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
 Frame = -1

Query: 358 TQMLSPDTTYACYLVFELPGKCKGLKH-PVKARNLLPKNDSGTTIFYFRSPSLVNLHRDK 182
           T++LSP T Y+ Y+VF+    C GL H PV+    L   +S     YF  P      R+ 
Sbjct: 199 TRLLSPGTRYSAYIVFKTNDGCPGLGHLPVEVGLGLVGQESSKRFIYFVGPRDRRRGRET 258

Query: 181 R---VPEQREDGWMEVMVWEFFYNNEHNDDHHPMDLRLVCLEGSMSGLTICGVEFRPT 17
           R    PEQREDGWME  + EFF  NE + D     +  +      SGL I G+EFRPT
Sbjct: 259 RDVTKPEQREDGWMEAELGEFF--NEESCDEIEFSVIEIKSPSWKSGLIIQGIEFRPT 314


>ref|NP_973399.1| F-box protein [Arabidopsis thaliana]
           gi|122213648|sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box
           protein At2g02240 gi|330250466|gb|AEC05560.1| F-box
           protein [Arabidopsis thaliana]
          Length = 320

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 46/117 (39%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
 Frame = -1

Query: 355 QMLSPDTTYACYLVFELPGKCKGLKH-PVKARNLLPKNDSGTTIFYFRSPSLVNLHRDKR 179
           ++LSP T Y+ Y+VF+   +C GL H PV+    L   +S     YF  P      R+ R
Sbjct: 203 RVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYFIGPRDRRGRRETR 262

Query: 178 ---VPEQREDGWMEVMVWEFFYNNEHNDDHHPMDLRLVCLEGSMSGLTICGVEFRPT 17
               P+QREDGWME  + EFF  NE   D     +  +      SGL I G+EFRPT
Sbjct: 263 DVTKPDQREDGWMEAELGEFF--NEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRPT 317


>ref|XP_002876808.1| hypothetical protein ARALYDRAFT_904457 [Arabidopsis lyrata subsp.
           lyrata] gi|297322646|gb|EFH53067.1| hypothetical protein
           ARALYDRAFT_904457 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
 Frame = -1

Query: 364 IETQMLSPDTTYACYLVFELPGKCKGLKH-PVKARNLLPKNDSGTTIFYFRSPSLVNLHR 188
           + T+ LSP T Y+ Y+VF+   +C GL   P+K +  L   +       F  P      R
Sbjct: 164 MSTRYLSPGTHYSVYIVFKPKDQCPGLGDLPIKVKVGLVGQELFQRFIRFVGPMDQRCGR 223

Query: 187 ---DKRVPEQREDGWMEVMVWEFFYNNEHNDDHHPMDLRLVCLEGSMSGLTICGVEFRPT 17
              D   PE+REDGWME  + EFF N    DDH  + +  +      SGL I G+EFRPT
Sbjct: 224 EMSDVTRPEEREDGWMEAELGEFF-NEISCDDHVEVSVVEIKSPYWKSGLIIQGIEFRPT 282


>ref|XP_002512468.1| conserved hypothetical protein [Ricinus communis]
           gi|223548429|gb|EEF49920.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
 Frame = -1

Query: 364 IETQMLSPDTTYACYLVFELPGKCKGL-----KHPVKARNLLP------------KNDSG 236
           I+TQMLSP+T Y  YL+ ++  +  GL     +  ++  NLL             K    
Sbjct: 144 IKTQMLSPNTQYGAYLILKISDRAYGLDLIPCEVSIEVDNLLSSSTAYLRHGQYSKKQQM 203

Query: 235 TTIFYFRSPSLVN---LHRDKRVPEQREDGWMEVMVWEFFYNNEHNDDHHPMDLRLVCLE 65
             +F+     ++    +  D RVP  REDGW+E+ + EFF N E +D+   M L+ V  +
Sbjct: 204 EHLFFANRTHMLKSRVVEGDARVPSGREDGWLEIELGEFFVNGE-SDEEVKMSLKEVKGQ 262

Query: 64  GSMSGLTICGVEFRP 20
               GL I G+E RP
Sbjct: 263 HLKGGLIIEGIEVRP 277


>ref|XP_002876807.1| phloem protein 2-B2 [Arabidopsis lyrata subsp. lyrata]
           gi|297322645|gb|EFH53066.1| phloem protein 2-B2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
 Frame = -1

Query: 364 IETQMLSPDTTYACYLVFELPGKCKGLKH-PVKARNLLPKNDSGTTIFYFRSPSLVNLHR 188
           + T+ LSP T Y+ Y+VF+   +C  L   P +A   L    S     YF  P+     R
Sbjct: 176 MSTKYLSPRTRYSAYIVFKTKDRCPNLGDVPAEATVGLVGQASSQRFIYFVGPTNRGRER 235

Query: 187 DKRV---PEQREDGWMEVMVWEFFYNNEHNDDHHPMDLRLVCLEGSMSGLTICGVEFRPT 17
           + RV   P +R+DGWME  + EFF  NE + D     +          GL I G+EFRPT
Sbjct: 236 ETRVVTKPTERKDGWMEAELGEFF--NESSCDEVATSILETKSPYWKRGLIIQGIEFRPT 293


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