BLASTX nr result

ID: Atractylodes21_contig00016517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016517
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arab...    79   3e-13
ref|NP_973399.1| F-box protein [Arabidopsis thaliana] gi|1222136...    78   6e-13
emb|CAN65690.1| hypothetical protein VITISV_022466 [Vitis vinifera]    78   6e-13
emb|CBI38318.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002279225.1| PREDICTED: F-box protein PP2-B15-like [Vitis...    75   4e-12

>ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arabidopsis lyrata subsp.
           lyrata] gi|297322644|gb|EFH53065.1| hypothetical protein
           ARALYDRAFT_322561 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
 Frame = +2

Query: 2   LIDNEKKLFSLSKVNGKKCHMIPAREV-IYKSQNVKCSNYKPSERSRFSEVVELQSHQAF 178
           LI++ KK F L K +GK+C M+ ++E+ I    + +   +     SRF +V EL +   F
Sbjct: 132 LIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISVPESRFEKVAELLNVCWF 191

Query: 179 HIKCNIETQMLSRDTTYACYLVFELPGKCTGLKY-PVKARNLLPKNDKDTTIFYFRSPSP 355
            I+    T++LS  T Y+ Y+VF+    C GL + PV+    L   +      YF  P  
Sbjct: 192 EIRGKTSTRLLSPGTRYSAYIVFKTNDGCPGLGHLPVEVGLGLVGQESSKRFIYFVGPRD 251

Query: 356 ENFHRDKR---VPEQREDGWMEVIVWEFF 433
               R+ R    PEQREDGWME  + EFF
Sbjct: 252 RRRGRETRDVTKPEQREDGWMEAELGEFF 280


>ref|NP_973399.1| F-box protein [Arabidopsis thaliana]
           gi|122213648|sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box
           protein At2g02240 gi|330250466|gb|AEC05560.1| F-box
           protein [Arabidopsis thaliana]
          Length = 320

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
 Frame = +2

Query: 2   LIDNEKKLFSLSKVNGKKCHMIPAREV-IYKSQNVKCSNYKPSERSRFSEVVELQSHQAF 178
           LI++ KK F L K +GK+C M+ ++E+ I    + +   +     SRF+++ EL     F
Sbjct: 135 LIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWF 194

Query: 179 HIKCNIETQMLSRDTTYACYLVFELPGKCTGLKY-PVKARNLLPKNDKDTTIFYFRSPSP 355
            I+     ++LS  T Y+ Y+VF+   +C GL + PV+    L   +      YF  P  
Sbjct: 195 EIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYFIGPRD 254

Query: 356 ENFHRDKR---VPEQREDGWMEVIVWEFF 433
               R+ R    P+QREDGWME  + EFF
Sbjct: 255 RRGRRETRDVTKPDQREDGWMEAELGEFF 283


>emb|CAN65690.1| hypothetical protein VITISV_022466 [Vitis vinifera]
          Length = 277

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
 Frame = +2

Query: 2   LIDNEKKLFSLSKVNGKKCHMIPAREV-IYKSQNVKCSNYKPSERSRFSEVVELQSHQAF 178
           LID  +K FS+SK  GKK +M+ AR + I  S N    ++KP  +SRF+E VEL++    
Sbjct: 79  LIDEGRKSFSISKTTGKKGYMLSARNLSITWSSNTLYWSWKPLLQSRFAETVELRTICWL 138

Query: 179 HIKCNIETQMLSRDTTYACYLVFELPGKCTGLKYPVKARNLLPKNDKDTTIFYFRSPSPE 358
            I+  I T +LS  TTY  YL+ +   +  GL       +++    +   I Y R P   
Sbjct: 139 EIQGKISTSVLSPKTTYRAYLIVKFADRAYGLDSLPSEVSVVVGKHQSQGIAYLRRPESN 198

Query: 359 N-------------------FHRDKRVPEQREDGWMEVIVWEFF 433
                                  ++RVP +REDGW EV + EF+
Sbjct: 199 RPALERVCFLNRIEALRSKVSKGEERVPYEREDGWFEVELGEFY 242


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 55/151 (36%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
 Frame = +2

Query: 2   LIDNEKKLFSLSKVNGKKCHMIPAREV-IYKSQNVKCSNYKPSERSRFSEVVELQSHQAF 178
           LID  KK F L K +GKKC+M+ +RE+ I          +     SRF EV  LQ+   F
Sbjct: 100 LIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQAVCWF 159

Query: 179 HIKCNIETQMLSRDTTYACYLVFELPGKCTGLK-YPVKARNLLPKNDKDTTIFYF----R 343
            I+  I T MLS  T YA YLVF   G+  G +  PV++   +  N+  T + Y     +
Sbjct: 160 EIRGKINTCMLSPRTNYAAYLVFH-AGRSHGFEDVPVESSIEIVGNETTTRVIYLARYRK 218

Query: 344 SPSP-ENFHRDKRVPEQREDGWMEVIVWEFF 433
           +  P  +   D   P++RED W E+ + EFF
Sbjct: 219 NEEPTSSIRSDLPYPKKREDSWFEIELGEFF 249


>ref|XP_002279225.1| PREDICTED: F-box protein PP2-B15-like [Vitis vinifera]
          Length = 277

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
 Frame = +2

Query: 2   LIDNEKKLFSLSKVNGKKCHMIPAREV-IYKSQNVKCSNYKPSERSRFSEVVELQSHQAF 178
           LID  +K FS+SK  G+K + + AR + I  S N    ++KP  +SRF+E VEL++    
Sbjct: 79  LIDEGRKSFSISKTTGEKGYTLSARNLSITWSSNALYWSWKPLLQSRFAETVELRTICWL 138

Query: 179 HIKCNIETQMLSRDTTYACYLVFELPGKCTGLKYPVKARNLLPKNDKDTTIFYFRSPSPE 358
            I+  I T MLS  TTY  YL+ +   +  GL       +++    +   I Y R P   
Sbjct: 139 EIQGKISTCMLSPKTTYRAYLIVKFADRAYGLDALPSEVSVVVGKHQSQGIAYLRRPESN 198

Query: 359 N-------------------FHRDKRVPEQREDGWMEVIVWEFF 433
                                  ++RVP +REDGW EV + EF+
Sbjct: 199 RPTLERVCFLNRIEALRSKVSKGEERVPHEREDGWFEVELGEFY 242


Top