BLASTX nr result

ID: Atractylodes21_contig00016497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016497
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC49669.1| polyribonucleotide phophorylase [Spinacia oleracea]     79   5e-13
prf||2208281A 100RNP protein                                           78   9e-13
ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable pol...    76   2e-12
ref|XP_004136660.1| PREDICTED: probable polyribonucleotide nucle...    76   2e-12
ref|XP_002525684.1| polyribonucleotide nucleotidyltransferase, p...    74   1e-11

>gb|AAC49669.1| polyribonucleotide phophorylase [Spinacia oleracea]
          Length = 822

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
 Frame = +3

Query: 99  SSGFHGRPYSHFAHSTSSRHSKLSISYSPVTKPHTAPSVCAF--LLSRRITSNRFKIRAL 272
           SS  H  P+S    S+ S++ K+ +S S +++  T  ++ +   LL       +F +RA+
Sbjct: 2   SSLTHSCPHSSTLPSSHSKNCKILLSASALSRYRTFKTLASLHRLLPTNSHGKKFNVRAM 61

Query: 273 NRESDGXXXXXXXXRPFFPHRHSVKIPVGDRHITVETGQIGRQASGSVIVRDGETIIYTS 452
            +            +P+     SVKIP GDRHI VETG IGRQASG+V V DGETI+YT+
Sbjct: 62  AQTHVSQKHAHDSLQPY-----SVKIPFGDRHILVETGHIGRQASGAVTVTDGETIVYTT 116

Query: 453 V 455
           V
Sbjct: 117 V 117


>prf||2208281A 100RNP protein
          Length = 779

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
 Frame = +3

Query: 111 HGRPYSHFAHSTSSRHSKLSISYSPVTKPHTAPSVCAF--LLSRRITSNRFKIRALNRES 284
           H  P+S    S+ S++ K+ +S S +++  T  ++ +   LL       +F +RA+ +  
Sbjct: 4   HSCPHSSTLPSSHSKNCKILLSASALSRYRTFKTLASLHRLLPTNSHGKKFNVRAMAQTH 63

Query: 285 DGXXXXXXXXRPFFPHRHSVKIPVGDRHITVETGQIGRQASGSVIVRDGETIIYTSV 455
                     +P+     SVKIP GDRHI VETG IGRQASG+V V DGETI+YT+V
Sbjct: 64  VSQKHAHDSLQPY-----SVKIPFGDRHILVETGHIGRQASGAVTVTDGETIVYTTV 115


>ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable polyribonucleotide
           nucleotidyltransferase 1, chloroplastic-like [Cucumis
           sativus]
          Length = 922

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/126 (42%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
 Frame = +3

Query: 90  MLASS-GFHGRP-YSHFAHSTSSRHSKLSIS-YSPVTKPHTAPSVCAF-LLSRRITSNRF 257
           MLA+  G H +P YSH +  +    SK+S+S Y P     T  +  +  LL  + ++ R 
Sbjct: 1   MLANPCGLHFKPCYSHTSEFSHFGTSKISLSSYCPRFHGSTKSNFSSLSLLRSKKSAKRL 60

Query: 258 KIRALNRESDGXXXXXXXXRPFFPHRHSVKIPVGDRHITVETGQIGRQASGSVIVRDGET 437
             +AL+  S           P      SVKIPVGDRHI VETG IGRQAS +V V DGET
Sbjct: 61  VTKALSESSVPDSVAASDEAPGSLRPFSVKIPVGDRHILVETGHIGRQASSAVTVTDGET 120

Query: 438 IIYTSV 455
           I+YT+V
Sbjct: 121 IVYTTV 126


>ref|XP_004136660.1| PREDICTED: probable polyribonucleotide nucleotidyltransferase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 922

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/126 (42%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
 Frame = +3

Query: 90  MLASS-GFHGRP-YSHFAHSTSSRHSKLSIS-YSPVTKPHTAPSVCAF-LLSRRITSNRF 257
           MLA+  G H +P YSH +  +    SK+S+S Y P     T  +  +  LL  + ++ R 
Sbjct: 1   MLANPCGLHFKPCYSHTSEFSHFGTSKISLSSYCPRFHGSTKSNFSSLSLLRSKKSAKRL 60

Query: 258 KIRALNRESDGXXXXXXXXRPFFPHRHSVKIPVGDRHITVETGQIGRQASGSVIVRDGET 437
             +AL+  S           P      SVKIPVGDRHI VETG IGRQAS +V V DGET
Sbjct: 61  VTKALSESSVPDSVAASDEAPGSLRPFSVKIPVGDRHILVETGHIGRQASSAVTVTDGET 120

Query: 438 IIYTSV 455
           I+YT+V
Sbjct: 121 IVYTTV 126


>ref|XP_002525684.1| polyribonucleotide nucleotidyltransferase, putative [Ricinus
           communis] gi|223534984|gb|EEF36667.1| polyribonucleotide
           nucleotidyltransferase, putative [Ricinus communis]
          Length = 948

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 51/120 (42%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
 Frame = +3

Query: 108 FHGRPYSHFAHSTSSRHSKLSISYSPVTKPHTA----PSVCAFLLSRRITSNRFKIRALN 275
           +H +    F++S ++R  KL +S +     H++    PS+   L  +R    RF  RAL 
Sbjct: 15  YHPQTSPSFSNSITTR-CKLFLSPNCPRFIHSSFSKFPSLSLLLPCKR--GERFSARALE 71

Query: 276 RESDGXXXXXXXXRPFFPHRHSVKIPVGDRHITVETGQIGRQASGSVIVRDGETIIYTSV 455
            + +           FFP   SVKIP GDRHI VETG  GRQASGSV+V DGETI+YT+V
Sbjct: 72  -DPEITESVIVDGPQFFPQAVSVKIPFGDRHILVETGHTGRQASGSVMVTDGETIVYTTV 130


Top