BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016483
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   106   2e-21
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   104   7e-21
ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 ...   104   9e-21
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc...   104   9e-21
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   103   1e-20

>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/117 (51%), Positives = 74/117 (63%), Gaps = 9/117 (7%)
 Frame = -2

Query: 325  KKSLYGLKQTPSGLVQEICRLCILHWVLSSKSDHSLFIYHQGTDMTYIILYVDD------ 164
            +KSLYGLKQ P    Q            SS SD SLFIY  G ++ Y++LYVDD      
Sbjct: 741  QKSLYGLKQAPRAWYQRFATYICQLGFTSSASDTSLFIYKDGDNIAYLLLYVDDILLTAS 800

Query: 163  ---LRKSIMSRLNSEFAMKDLGELSYFLGIVVTRHAGGLFLSQRKYAEEIIERDGMS 2
               L + I +RL+SEFAM DLG+L +FLGI VTR A GLFLSQR+YA +++ R GMS
Sbjct: 801  STSLLQHITARLHSEFAMTDLGDLHFFLGISVTRSADGLFLSQRQYAVDLLRRAGMS 857


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 978

 Score =  104 bits (260), Expect = 7e-21
 Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
 Frame = -2

Query: 325  KKSLYGLKQTPSGLVQEICRLCILHWVLSSKSDHSLFIYHQGTDMTYIILYVDD------ 164
            +KSLYGLKQ P    Q            SS SD SLF+Y  G ++ Y++LYVDD      
Sbjct: 653  QKSLYGLKQAPRAWYQRFATYIRQLGFTSSASDTSLFVYKDGDNIAYLLLYVDDIILTAS 712

Query: 163  ---LRKSIMSRLNSEFAMKDLGELSYFLGIVVTRHAGGLFLSQRKYAEEIIERDGMS 2
               L + I +RL+SEFAM DLG+L +FLGI VTR + GLFLSQR+YA ++++R GMS
Sbjct: 713  SATLLQHITARLHSEFAMTDLGDLHFFLGISVTRSSDGLFLSQRQYAVDLLKRAGMS 769


>ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 [Sorghum bicolor]
           gi|241947143|gb|EES20288.1| hypothetical protein
           SORBIDRAFT_0013s009070 [Sorghum bicolor]
          Length = 1219

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/117 (48%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
 Frame = -2

Query: 325 KKSLYGLKQTPSGLVQEICRLCILHWVLSSKSDHSLFIYHQGTDMTYIILYVDD------ 164
           +KSLYGLKQ P    Q            +S SD SLF+Y +G D  Y++LYVDD      
Sbjct: 409 QKSLYGLKQAPRAWYQRFGSFVQQSGFTASTSDSSLFVYKEGADTAYLLLYVDDIILTAS 468

Query: 163 ---LRKSIMSRLNSEFAMKDLGELSYFLGIVVTRHAGGLFLSQRKYAEEIIERDGMS 2
              L + I   L+SEFAM DLG+L +FLGI VTR  GGLFLSQR+YA E+++  GM+
Sbjct: 469 SPALLRRITELLHSEFAMTDLGDLHHFLGIAVTRTTGGLFLSQRQYAVELLQHAGMA 525


>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 976

 Score =  104 bits (259), Expect = 9e-21
 Identities = 59/117 (50%), Positives = 73/117 (62%), Gaps = 10/117 (8%)
 Frame = -2

Query: 322 KSLYGLKQTPSGLVQEICRLCILHWVLSSKSDHSLFIYHQGTDMTYIILYVDD------- 164
           KSLYGLKQTP           +      +KSD SLF+Y  G+D  Y++LYVDD       
Sbjct: 606 KSLYGLKQTPRAWYNRFAMFLLSIGFTEAKSDTSLFVYRHGSDTVYLLLYVDDIVLTASS 665

Query: 163 ---LRKSIMSRLNSEFAMKDLGELSYFLGIVVTRHAGGLFLSQRKYAEEIIERDGMS 2
              LR +I S L  EF+MKDLG L++FLGI VT H+GGL L+QR+Y  EI+ER GMS
Sbjct: 666 SNILRWTITS-LQKEFSMKDLGPLNHFLGINVTPHSGGLLLTQRQYCLEILERAGMS 721


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/116 (48%), Positives = 72/116 (62%), Gaps = 9/116 (7%)
 Frame = -2

Query: 322  KSLYGLKQTPSGLVQEICRLCILHWVLSSKSDHSLFIYHQGTDMTYIILYVDD------- 164
            KSLYGLKQ P           +      +KSD SLFIYH+G+D+ Y++LYVDD       
Sbjct: 739  KSLYGLKQAPRAWYSRFASYLLTLGFTKAKSDTSLFIYHRGSDLVYLLLYVDDIVLTASS 798

Query: 163  --LRKSIMSRLNSEFAMKDLGELSYFLGIVVTRHAGGLFLSQRKYAEEIIERDGMS 2
              L +  +  L +EF+MKDLG L +FLGI VT  + GL LSQR+Y+ EI+ER GMS
Sbjct: 799  AGLLRWAIQALQAEFSMKDLGTLHHFLGITVTSDSSGLLLSQRQYSIEILERAGMS 854