BLASTX nr result

ID: Atractylodes21_contig00016359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016359
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   481   e-133
ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinu...   421   e-115
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   418   e-114
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   417   e-114
ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica...   380   e-103

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  481 bits (1237), Expect = e-133
 Identities = 240/359 (66%), Positives = 277/359 (77%), Gaps = 3/359 (0%)
 Frame = -1

Query: 1234 VSRARFLNPTSDALTVAYALQCFELSENQVEFCDENALHLKTMEEMSKLRKQLLHLVFNQ 1055
            VSRA+F NP+SDALTVAYALQCFELS + VEFC+EN +HLKT+EEMSKLRKQLL LVFNQ
Sbjct: 1057 VSRAKFSNPSSDALTVAYALQCFELSGSPVEFCNENVMHLKTLEEMSKLRKQLLQLVFNQ 1116

Query: 1054 TPCDT-PQELLWTYGNMEDVERAWMVYSNKHPLMLNEEELLGQAICAGWADRVARRVRGI 878
            +      +E  W +G MED E AW V S+KHPL LNEEELLGQAICAGWADRVA+R R I
Sbjct: 1117 STIGALHEEFSWPHGTMEDTEHAWRVSSDKHPLSLNEEELLGQAICAGWADRVAKRTRAI 1176

Query: 877  SGLSEEDRKVNAARYQAHKVSETVFLHRWSSVSRTAPEFLVYSELVDRKRPYIHGATRVK 698
            SG SE DRK  AARYQA  V ETVFLHRWSS++R+APEFLVYSEL+  KRPY+HG T VK
Sbjct: 1177 SGSSEGDRKAKAARYQACMVKETVFLHRWSSLARSAPEFLVYSELLQTKRPYMHGVTNVK 1236

Query: 697  PEWLARYSGYLCSFSAPLADPKPYYEPQTDQVYNWVSTTFGDHLWQLPLHSLPVKDKKLG 518
            P+WL +Y+  LCSFSAPL DPKPYYEP  DQV+ WV  TFG HLW+LPLH +P+ D    
Sbjct: 1237 PDWLVKYAAPLCSFSAPLTDPKPYYEPLADQVFCWVIPTFGPHLWRLPLHGVPISDNAQR 1296

Query: 517  VNVFCYSLLDGIVLPCVRRVRKFMAAQPGSILKPEASGHKRFGRLLYEL--RKKHIQSCG 344
            V+VF Y+LL+G VLPC+  VRK+MAA P SIL+PEA G +R G LL +L  R K I SC 
Sbjct: 1297 VSVFAYALLEGQVLPCLGSVRKYMAAPPASILRPEALGQRRVGNLLSKLKSRPKTIDSCL 1356

Query: 343  MLRKAWDENRRTLYSEILDWFQEGFQKDFDDLWENMQREVHLDPEERFAKAVKKEKRRK 167
            MLR+AW EN R L+SEILDWFQE F K F+ LW  M  EV LDP+ERF K  K+ KR+K
Sbjct: 1357 MLREAWRENPRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDPQERFPKK-KRGKRKK 1414


>ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537692|gb|EEF39315.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 868

 Score =  421 bits (1081), Expect = e-115
 Identities = 216/374 (57%), Positives = 262/374 (70%), Gaps = 1/374 (0%)
 Frame = -1

Query: 1312 SGVISNENVISXXXXXXXXXXXXXXKVSRARFLNPTSDALTVAYALQCFELSENQVEFCD 1133
            SG + N+  +               KVSR +F N TSDALT+AYALQCFELS + VEFC 
Sbjct: 497  SGTLDNKKNLDKQEKLRKKKLKETLKVSREKFSNLTSDALTIAYALQCFELSNSPVEFCS 556

Query: 1132 ENALHLKTMEEMSKLRKQLLHLVFNQTPCDT-PQELLWTYGNMEDVERAWMVYSNKHPLM 956
            ENALHLKTMEEMSKLRKQ+L LVFN+       Q+  W++GNM DVE+AW V S K  L 
Sbjct: 557  ENALHLKTMEEMSKLRKQILQLVFNKNVNHGFEQDFSWSHGNMGDVEQAWRVLSRK--LK 614

Query: 955  LNEEELLGQAICAGWADRVARRVRGISGLSEEDRKVNAARYQAHKVSETVFLHRWSSVSR 776
            L+EEELL QAICAGWADR+A+R+RG S  SE DR+VN+ RYQA KV E VFLHRWS +S 
Sbjct: 615  LDEEELLCQAICAGWADRIAKRIRGDSKSSEGDRRVNSVRYQACKVKEDVFLHRWSYLSS 674

Query: 775  TAPEFLVYSELVDRKRPYIHGATRVKPEWLARYSGYLCSFSAPLADPKPYYEPQTDQVYN 596
            + PEFLVYSEL+  KRPYIHGAT VKPEW+ +Y+G LC  S  + DPKPYYEP+TDQVY 
Sbjct: 675  SPPEFLVYSELLHTKRPYIHGATSVKPEWIVKYAGSLCRLST-VEDPKPYYEPETDQVYC 733

Query: 595  WVSTTFGDHLWQLPLHSLPVKDKKLGVNVFCYSLLDGIVLPCVRRVRKFMAAQPGSILKP 416
            W+  TF  HLWQLPL SLP+ +    V VF  +LL+G VLPC+R  R+ MAA+P  IL  
Sbjct: 734  WLRPTFKPHLWQLPLCSLPISNDIDRVKVFACALLEGQVLPCLRPCREHMAARPSIILNQ 793

Query: 415  EASGHKRFGRLLYELRKKHIQSCGMLRKAWDENRRTLYSEILDWFQEGFQKDFDDLWENM 236
            EA+G  R G LLY+L  K + SC MLR+ W +N   L+SEIL WF++ +   F +LW  M
Sbjct: 794  EAAGESRVGNLLYKLNTKFVDSCAMLRELWKQNPDELHSEILHWFKKTYYSKFGELWSRM 853

Query: 235  QREVHLDPEERFAK 194
              EV L+P ERF+K
Sbjct: 854  HIEVQLEPHERFSK 867


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  418 bits (1074), Expect = e-114
 Identities = 206/357 (57%), Positives = 258/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1234 VSRARFLNPTSDALTVAYALQCFELSENQVEFCDENALHLKTMEEMSKLRKQLLHLVFNQ 1055
            +SR +F + +SDALTVAYALQCFE SE  V FC+   LHLKTM+EMSKLRKQLL LVFN 
Sbjct: 975  LSREKFSDHSSDALTVAYALQCFEHSETPVAFCNNFTLHLKTMQEMSKLRKQLLKLVFNH 1034

Query: 1054 TPCDTPQ-ELLWTYGNMEDVERAWMVYSNKHPLMLNEEELLGQAICAGWADRVARRVRGI 878
            +     + E  WT G +EDVE  W V SNKHPL L E+E++GQAICAGW DRVA+R+R I
Sbjct: 1035 SRSSIAESEFSWTNGVLEDVEAMWRVPSNKHPLSLKEKEIIGQAICAGWPDRVAKRIREI 1094

Query: 877  SGLSEEDRKVNAARYQAHKVSETVFLHRWSSVSRTAPEFLVYSELVDRKRPYIHGATRVK 698
            S   E DRK  A +YQA  V E VF++RWSSVSR+AP+FLVY+EL+  KRPY+HG T V+
Sbjct: 1095 SKSVEADRKERAGKYQACMVKENVFVNRWSSVSRSAPKFLVYNELLRTKRPYMHGLTSVQ 1154

Query: 697  PEWLARYSGYLCSFSAPLADPKPYYEPQTDQVYNWVSTTFGDHLWQLPLHSLPVKDKKLG 518
            P+WL +Y+  LC+FSAPL DPKPYY+ Q D VY+WV+ TFG HLW+LPLH++P+KD   G
Sbjct: 1155 PDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPHLWELPLHNVPIKDNAQG 1214

Query: 517  VNVFCYSLLDGIVLPCVRRVRKFMAAQPGSILKPEASGHKRFGRLLYELRKKHIQSCGML 338
            V VF  +LL G VLPC+  V +F+AA+P SIL+PEA G KR G LL +LR K I S   L
Sbjct: 1215 VAVFACALLKGKVLPCLTSVSEFLAARPSSILRPEALGQKRVGNLLSKLRSKKINSRATL 1274

Query: 337  RKAWDENRRTLYSEILDWFQEGFQKDFDDLWENMQREVHLDPEERFAKAVKKEKRRK 167
            R  W +N   L+ EILDWFQ+ +   F+DLW  M  EV L P++R  K +++ K +K
Sbjct: 1275 RAVWKDNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQL-PQKRLIKKLERAKEKK 1330


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  417 bits (1073), Expect = e-114
 Identities = 206/357 (57%), Positives = 258/357 (72%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1234 VSRARFLNPTSDALTVAYALQCFELSENQVEFCDENALHLKTMEEMSKLRKQLLHLVFNQ 1055
            +SR +F + +SDALTVAYALQCFE SE  V FC+   LHLKTM+EMSKLRKQLL LVFN 
Sbjct: 975  LSREKFSDHSSDALTVAYALQCFEHSETPVAFCNNFTLHLKTMQEMSKLRKQLLKLVFNH 1034

Query: 1054 TPCDTPQ-ELLWTYGNMEDVERAWMVYSNKHPLMLNEEELLGQAICAGWADRVARRVRGI 878
            +     + E  WT G +EDVE  W V SNKHPL L E+E++GQAICAGW DRVA+R+R I
Sbjct: 1035 SRSSIAESEFSWTNGVLEDVEAMWRVPSNKHPLSLKEKEIIGQAICAGWPDRVAKRIREI 1094

Query: 877  SGLSEEDRKVNAARYQAHKVSETVFLHRWSSVSRTAPEFLVYSELVDRKRPYIHGATRVK 698
            S   E DRK  A +YQA  V E VF++RWSSVSR+AP+FLVY+EL+  KRPY+HG T V+
Sbjct: 1095 SKSVEADRKERAGKYQACMVKENVFVNRWSSVSRSAPKFLVYNELLRTKRPYMHGLTSVQ 1154

Query: 697  PEWLARYSGYLCSFSAPLADPKPYYEPQTDQVYNWVSTTFGDHLWQLPLHSLPVKDKKLG 518
            P+WL +Y+  LC+FSAPL DPKPYY+ Q D VY+WV+ TFG HLW+LPLH++P+KD   G
Sbjct: 1155 PDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPHLWELPLHNVPIKDNAQG 1214

Query: 517  VNVFCYSLLDGIVLPCVRRVRKFMAAQPGSILKPEASGHKRFGRLLYELRKKHIQSCGML 338
            V VF  +LL G VLPC+  V +F+AA+P SIL+PEA G KR G LL +LR K I S   L
Sbjct: 1215 VAVFACALLKGKVLPCLTSVSEFLAARPSSILRPEALGXKRVGNLLSKLRSKKINSRATL 1274

Query: 337  RKAWDENRRTLYSEILDWFQEGFQKDFDDLWENMQREVHLDPEERFAKAVKKEKRRK 167
            R  W +N   L+ EILDWFQ+ +   F+DLW  M  EV L P++R  K +++ K +K
Sbjct: 1275 RAVWKDNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQL-PQKRLIKKLERAKEKK 1330


>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
            max]
          Length = 1403

 Score =  380 bits (976), Expect = e-103
 Identities = 193/368 (52%), Positives = 247/368 (67%), Gaps = 12/368 (3%)
 Frame = -1

Query: 1234 VSRARFLNPTSDALTVAYALQCFELSENQVEFCDENALHLKTMEEMSKLRKQLLHLVFNQ 1055
            V+R +F   TSDALT+AYALQCFE SE   EFCD+NALH KTM+EMSKLR+QLL LVF Q
Sbjct: 1032 VAREKFRVVTSDALTIAYALQCFEHSEKSAEFCDDNALHFKTMDEMSKLRQQLLKLVFYQ 1091

Query: 1054 TPCDT-PQELLWTYGNMEDVERAWMVYSNKHPLMLNEEELLGQAICAGWADRVARRVRGI 878
            +      +E  W +G++EDVERAW   S K+PL L EE L+ QAICAGWADRVA+R+   
Sbjct: 1092 SDKGGFEEEYSWIHGSLEDVERAWQASSEKYPLSLVEERLICQAICAGWADRVAKRITAS 1151

Query: 877  SGLSEEDRKVNAARYQAHKVSETVFLHRWSSVSRTAPEFLVYSELVDRKRP--------- 725
            S  S+ ++  +A +YQ+  V E+VFLHRWSS S   PEFLVY+EL++ KRP         
Sbjct: 1152 SRASDGEKTSHALKYQSSMVDESVFLHRWSSASIVGPEFLVYNELLETKRPNKEGITSAK 1211

Query: 724  --YIHGATRVKPEWLARYSGYLCSFSAPLADPKPYYEPQTDQVYNWVSTTFGDHLWQLPL 551
              Y+HG T V+P WL   +   C FS PL DP+PYY+ +TDQV  WV  TFG   W+LP 
Sbjct: 1212 RAYMHGVTSVEPAWLVENAKSSCIFSPPLTDPRPYYDARTDQVKCWVIPTFGRFCWELPK 1271

Query: 550  HSLPVKDKKLGVNVFCYSLLDGIVLPCVRRVRKFMAAQPGSILKPEASGHKRFGRLLYEL 371
            HSLP+ + +  V VF Y+LL+G V PC++ VRK+M+A P SI+K EA G KR G LL +L
Sbjct: 1272 HSLPISNDEHQVQVFAYALLEGQVCPCLKSVRKYMSAPPESIMKREAFGQKRVGNLLSKL 1331

Query: 370  RKKHIQSCGMLRKAWDENRRTLYSEILDWFQEGFQKDFDDLWENMQREVHLDPEERFAKA 191
            + + I S  MLR  W EN R L+SEILDWFQ+ F K F++LW  M  EV ++ +E     
Sbjct: 1332 KSRLIDSSAMLRMVWKENPRELFSEILDWFQQSFHKHFEELWLQMLNEVLMEKQESPLHK 1391

Query: 190  VKKEKRRK 167
              K+K+ K
Sbjct: 1392 SSKKKKGK 1399


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