BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016339
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   170   1e-40
ref|XP_002308662.1| rna-dependent RNA polymerase [Populus tricho...   166   2e-39
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   160   1e-37
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   159   2e-37
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     156   1e-36

>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/121 (66%), Positives = 101/121 (83%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   FTKDTAFSFKGTKSHAVIKCNFKVEFLARDVNDIKEYE--SYLVLVFQLASAPLIFYRTA 175
           FT+DTAFSFKGT  HAVI+C+FK+EFL RD+N+IK+Y   S LV++ QLASAP ++YRTA
Sbjct: 174 FTRDTAFSFKGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTA 233

Query: 176 DDDIAITHPSEMLDDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 355
           DDDI +  P ++LDDDDPWIRTTDFTPSGAIGRCN+YR+ I  R   K+K+AL FL+E+R
Sbjct: 234 DDDIEVLVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERR 293

Query: 356 V 358
           V
Sbjct: 294 V 294


>ref|XP_002308662.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1198

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/121 (66%), Positives = 101/121 (83%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   FTKDTAFSFKGTKSHAVIKCNFKVEFLARDVNDIKEYE--SYLVLVFQLASAPLIFYRTA 175
           F+++TAFSFK T  HAVIKC+FKVEFL RD+N+IK+Y   S LVL+ QLASAP ++YRTA
Sbjct: 174 FSRNTAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTA 233

Query: 176 DDDIAITHPSEMLDDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 355
           DDDI ++ P ++LDDDDPWIRTTDFT SGAIGRC++YR+ I  R  PK++KA+ FLKE+R
Sbjct: 234 DDDIEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERR 293

Query: 356 V 358
           V
Sbjct: 294 V 294


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/121 (62%), Positives = 98/121 (80%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   FTKDTAFSFKGTKSHAVIKCNFKVEFLARDVNDIKEYE--SYLVLVFQLASAPLIFYRTA 175
           F++DTAFSFKGT  HAVIKC+FKVEFL R++N++K+Y   +  V++ QLAS+P ++YRTA
Sbjct: 174 FSRDTAFSFKGTNEHAVIKCDFKVEFLVREINEVKQYSEPTGFVVLLQLASSPWVWYRTA 233

Query: 176 DDDIAITHPSEMLDDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 355
           DDD   T P  +LDDDD WIRTTDFT SGAIGRCNTYR+L+R R   K+KKA+ +L+E+R
Sbjct: 234 DDDFEKTVPFGLLDDDDQWIRTTDFTASGAIGRCNTYRVLVRPRHGLKLKKAMDYLRERR 293

Query: 356 V 358
           V
Sbjct: 294 V 294


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/121 (63%), Positives = 97/121 (80%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   FTKDTAFSFKGTKSHAVIKCNFKVEFLARDVNDIKEYE--SYLVLVFQLASAPLIFYRTA 175
           FTKDTAFSFKG   HAVIKCNFKVEFL R++N++++    S L+L+ QL+S+P ++YRTA
Sbjct: 174 FTKDTAFSFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTA 233

Query: 176 DDDIAITHPSEMLDDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 355
           DDDI  T P ++LDDDDPWIRTTDFT SGAIGRCN+YRI I  R   K+KKA+ +L+ +R
Sbjct: 234 DDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARR 293

Query: 356 V 358
           V
Sbjct: 294 V 294


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/121 (61%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   FTKDTAFSFKGTKSHAVIKCNFKVEFLARDVNDIKEYESY--LVLVFQLASAPLIFYRTA 175
           FTKDTAFSF+G   HA+IKCNFK+EFL R++N+IK+ + +  LV++FQLAS+PL+FYRTA
Sbjct: 173 FTKDTAFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTA 232

Query: 176 DDDIAITHPSEMLDDDDPWIRTTDFTPSGAIGRCNTYRILIRVRDVPKVKKALYFLKEQR 355
           DDDI  +   ++LDDDD WIRTTD T SGAIGRCNTYRI IR R+ P  +KA+ +   +R
Sbjct: 233 DDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRR 292

Query: 356 V 358
           V
Sbjct: 293 V 293