BLASTX nr result

ID: Atractylodes21_contig00016329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016329
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274458.1| PREDICTED: nuclear transcription factor Y su...    80   8e-13
ref|XP_002521352.1| Nuclear transcription factor Y subunit A-3, ...    70   6e-10

>ref|XP_002274458.1| PREDICTED: nuclear transcription factor Y subunit A-3 [Vitis
           vinifera] gi|297743031|emb|CBI35898.3| unnamed protein
           product [Vitis vinifera]
          Length = 336

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 58/173 (33%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
 Frame = +1

Query: 370 MQELVKNDSDVGDRRSGAPCIVGYPSQWTGVESFVEQSTLSNNLSLKMGSSTPRHQNTKQ 549
           MQ L KND  V   R  +PC    P  WT  E+  +QS+L     LK+G+ T  + +TK+
Sbjct: 1   MQHLCKNDFHVNSARPTSPCDASSPHWWTSSETNTQQSSLPKFSRLKIGTQTIDYHSTKE 60

Query: 550 LGLXXXXXXXXXXXXXXXXXXYPEVASAGDSYPYGENKFSIQSGYKGTQGGHEEGSVGSA 729
           LG                   YP V   G +  +G++ FS   GYK T G          
Sbjct: 61  LG--SQVRDQDSPSTRSTGQSYPGVLHWGGNNTHGQSIFSAHLGYKETHG-------KPM 111

Query: 730 LPMGTQDY--------ARQPYACIPLLYPDPYHRGLLAP-YGSQTMFPHPQAM 861
           + +G QDY          Q  A IP+   + YH  LLAP YG++ M  HPQ M
Sbjct: 112 VSIGNQDYLFTPSQVDCNQLTARIPITATEIYHCDLLAPAYGTKAMIHHPQMM 164


>ref|XP_002521352.1| Nuclear transcription factor Y subunit A-3, putative [Ricinus
           communis] gi|223539430|gb|EEF41020.1| Nuclear
           transcription factor Y subunit A-3, putative [Ricinus
           communis]
          Length = 335

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 56/169 (33%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
 Frame = +1

Query: 370 MQELVKNDSDVGDRRSGAPCIVGYPSQWTGVESFVEQSTLSNNLSLKMGSSTPRHQNTKQ 549
           M  L K +S +    S +P IVG        ES V QS+LS +L L MG    +   +K+
Sbjct: 5   MHNLCKKESGMCSLLSTSPYIVGRQLLGNSTESTVHQSSLSESLGLTMGVPHQQFHGSKK 64

Query: 550 LGLXXXXXXXXXXXXXXXXXXYPEVASAGDSYPYGENKFSIQSGYKGTQGGHEEGSVGSA 729
           L                    YPEVAS G+ +     K          +GGH    V   
Sbjct: 65  LTFQFQDQDSSSTQSTGQS--YPEVASMGEGFNESHEK---------AEGGH----VKLV 109

Query: 730 LPMGTQDY-------ARQPYACIPLLYPDPYHRGLLAPYGSQTMFPHPQ 855
             MGTQD+         Q  A +PL + +PY  GLLA YG Q+M  HPQ
Sbjct: 110 SLMGTQDFIFPSQFDCSQSVARVPLHFTEPYFGGLLAAYGPQSMIHHPQ 158


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