BLASTX nr result

ID: Atractylodes21_contig00016310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016310
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o...   421   e-115
ref|XP_002887646.1| chlorophyll A-B binding family protein [Arab...   412   e-113
ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [P...   412   e-113
ref|XP_002510744.1| chlorophyll A/B binding protein, putative [R...   411   e-113
ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycin...   409   e-112

>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic [Vitis vinifera]
           gi|297745621|emb|CBI40786.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  421 bits (1081), Expect = e-115
 Identities = 191/223 (85%), Positives = 212/223 (95%)
 Frame = +3

Query: 6   WYGEERPRWLGPIPFEYPAYLDGELPGDYGFDIAGLSEDPESFKRYYNFEILHARWAMLA 185
           WYGEERPRWLGPIP++YPAYL GELPGDYGFDIAGL +DP +F++Y+NFEILHARWAMLA
Sbjct: 109 WYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILHARWAMLA 168

Query: 186 ALGALIPELLDLVGAFHFVEPVWWRVGYSKLQGETLDYLGIPGFHFAGSQGVIVIAICQV 365
           ALGAL+PELLDL+GAFHFVEPVWWRVGYSKL+G+TLDYLGIPGFHFAGSQGVIVIAICQ 
Sbjct: 169 ALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVIVIAICQA 228

Query: 366 LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSGDPVGFQELKVKEIKNGR 545
           LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLS DPV F+ELKVKEIKNGR
Sbjct: 229 LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGR 288

Query: 546 LAMIAWLGFYGQAALTGKGPVQNLVDHISDPLHNNIIYVLQSL 674
           LAM+AWLGFY QAA TGKGPVQNL+DH++DP HNN++ + ++L
Sbjct: 289 LAMVAWLGFYIQAAATGKGPVQNLLDHLADPFHNNLLSIFKAL 331


>ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297333487|gb|EFH63905.1| chlorophyll A-B
           binding family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 330

 Score =  412 bits (1059), Expect = e-113
 Identities = 189/222 (85%), Positives = 205/222 (92%)
 Frame = +3

Query: 6   WYGEERPRWLGPIPFEYPAYLDGELPGDYGFDIAGLSEDPESFKRYYNFEILHARWAMLA 185
           WYG+ERPRW GPIP++YP YL GELPGDYGFDIAGL +D  +F +Y+NFEILHARWAMLA
Sbjct: 109 WYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLA 168

Query: 186 ALGALIPELLDLVGAFHFVEPVWWRVGYSKLQGETLDYLGIPGFHFAGSQGVIVIAICQV 365
           ALGALIPE+LDL GAFHF EPVWWRVGYSKLQGETLDYLGIPG H AGSQGVIVIAICQV
Sbjct: 169 ALGALIPEVLDLTGAFHFAEPVWWRVGYSKLQGETLDYLGIPGLHVAGSQGVIVIAICQV 228

Query: 366 LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSGDPVGFQELKVKEIKNGR 545
           LLMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS DPV F++LKVKEIKNGR
Sbjct: 229 LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGR 288

Query: 546 LAMIAWLGFYGQAALTGKGPVQNLVDHISDPLHNNIIYVLQS 671
           LAM+AWLGFY QAA TGKGPVQNLVDH+SDPLHNN++ +LQ+
Sbjct: 289 LAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLLAMLQT 330


>ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
           gi|222856453|gb|EEE94000.1| light-harvesting complex II
           protein Lhcb7 [Populus trichocarpa]
          Length = 338

 Score =  412 bits (1059), Expect = e-113
 Identities = 187/222 (84%), Positives = 206/222 (92%)
 Frame = +3

Query: 3   FWYGEERPRWLGPIPFEYPAYLDGELPGDYGFDIAGLSEDPESFKRYYNFEILHARWAML 182
           FWYGEERPRWLGPI ++YP YL GELPGDYGFD+AGL+EDP +F+RY+NFEILHARWAML
Sbjct: 115 FWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEILHARWAML 174

Query: 183 AALGALIPELLDLVGAFHFVEPVWWRVGYSKLQGETLDYLGIPGFHFAGSQGVIVIAICQ 362
           AALGALIPE+LDL GAFHF+EPVWWRVGYSKL+G+TLDYLGIPG HFAG QGV+VIA CQ
Sbjct: 175 AALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGVLVIAFCQ 234

Query: 363 VLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSGDPVGFQELKVKEIKNG 542
            +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS DPV F+ELKVKEIKNG
Sbjct: 235 AILMVGPEYARYCGIEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEELKVKEIKNG 294

Query: 543 RLAMIAWLGFYGQAALTGKGPVQNLVDHISDPLHNNIIYVLQ 668
           RLAM+AWLGFY QAALTGKGPV+NLV+HISDPLHNN+   L+
Sbjct: 295 RLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNLFSTLK 336


>ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223551445|gb|EEF52931.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 329

 Score =  411 bits (1057), Expect = e-113
 Identities = 188/221 (85%), Positives = 206/221 (93%)
 Frame = +3

Query: 6   WYGEERPRWLGPIPFEYPAYLDGELPGDYGFDIAGLSEDPESFKRYYNFEILHARWAMLA 185
           WYGEERPRWLGPIP++YPAYL GELPGDYGFD+AGLS+D  +F+RY+NFEILHARWAMLA
Sbjct: 107 WYGEERPRWLGPIPYDYPAYLTGELPGDYGFDVAGLSKDSVAFQRYFNFEILHARWAMLA 166

Query: 186 ALGALIPELLDLVGAFHFVEPVWWRVGYSKLQGETLDYLGIPGFHFAGSQGVIVIAICQV 365
           ALGAL PE+LDL GAFHF+EPVWWRVGYSKL+G+TLDYLGIPG HFAGSQGV+VIAICQ 
Sbjct: 167 ALGALAPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGSQGVLVIAICQA 226

Query: 366 LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSGDPVGFQELKVKEIKNGR 545
           LLMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS D V  +ELKVKEIKNGR
Sbjct: 227 LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLNLSSDAVALEELKVKEIKNGR 286

Query: 546 LAMIAWLGFYGQAALTGKGPVQNLVDHISDPLHNNIIYVLQ 668
           LAM+AWLGFY QAALTGKGPVQNLV+HISDP HNN++ VL+
Sbjct: 287 LAMVAWLGFYAQAALTGKGPVQNLVEHISDPFHNNLLCVLK 327


>ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
           gi|255636882|gb|ACU18774.1| unknown [Glycine max]
          Length = 331

 Score =  409 bits (1052), Expect = e-112
 Identities = 185/218 (84%), Positives = 205/218 (94%)
 Frame = +3

Query: 3   FWYGEERPRWLGPIPFEYPAYLDGELPGDYGFDIAGLSEDPESFKRYYNFEILHARWAML 182
           FWYGE+RPRWLGPI +EYP+YL GELPGDYGFDIAGL +DP + ++Y+NFEILHARWAML
Sbjct: 104 FWYGEDRPRWLGPISYEYPSYLTGELPGDYGFDIAGLGQDPVALQKYFNFEILHARWAML 163

Query: 183 AALGALIPELLDLVGAFHFVEPVWWRVGYSKLQGETLDYLGIPGFHFAGSQGVIVIAICQ 362
           A++GALIPE+LDL+GAFHFVEPVWWRVGYSKL+G+TLDYLGI G HFAGSQGV+VIAICQ
Sbjct: 164 ASVGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHFAGSQGVVVIAICQ 223

Query: 363 VLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSGDPVGFQELKVKEIKNG 542
            LLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLS DP  F+ELKVKEIKNG
Sbjct: 224 ALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEELKVKEIKNG 283

Query: 543 RLAMIAWLGFYGQAALTGKGPVQNLVDHISDPLHNNII 656
           RLAM+AWLGFY QAALTGKGPVQNL+DHISDP HNN++
Sbjct: 284 RLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNNLL 321


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