BLASTX nr result

ID: Atractylodes21_contig00016307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016307
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX20031.1| RING-finger protein [Capsicum annuum]                  491   e-136
ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|2...   471   e-130
ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   471   e-130
ref|XP_003618769.1| E3 ubiquitin-protein ligase RGLG2 [Medicago ...   461   e-127
gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...   461   e-127

>gb|AAX20031.1| RING-finger protein [Capsicum annuum]
          Length = 484

 Score =  491 bits (1263), Expect = e-136
 Identities = 244/321 (76%), Positives = 265/321 (82%), Gaps = 15/321 (4%)
 Frame = +1

Query: 1    EDNLIPCYGFGDASTHDQDVFSFYPEERFCNGFEEVLSRYREIVPQLKLAGPTSFAPVIE 180
            EDNLIPC+GFGDASTHDQDVFSF+P+ERFCNGFEEVL RYREIVPQLKLAGPTSFAPVIE
Sbjct: 164  EDNLIPCFGFGDASTHDQDVFSFFPDERFCNGFEEVLFRYREIVPQLKLAGPTSFAPVIE 223

Query: 181  QAMTIVEQSGGQYHVLLIIADGQVTRSVDTEPGNLSPQEQRTVDAIVQASKLPLSIVLVG 360
             AMTIVEQSGGQYHVLLIIADGQVTRSVDT  G LSPQEQ+TVDAIVQASK PLSI+LVG
Sbjct: 224  MAMTIVEQSGGQYHVLLIIADGQVTRSVDTGRGQLSPQEQKTVDAIVQASKFPLSIILVG 283

Query: 361  VGDGPWDMMKEFDDNIPARDFDNFQFVNFTEIMSKNVPPIRKETEFALSALMEIPAQYKA 540
            VGDGPWDMMKEFDDNIPARDFDNFQFVNFTEIM+KNVP  RKETEFALSALMEIP+QYKA
Sbjct: 284  VGDGPWDMMKEFDDNIPARDFDNFQFVNFTEIMAKNVPQSRKETEFALSALMEIPSQYKA 343

Query: 541  TIELNILGSRKGISPNRVALPPPVHGAXXXXXXXXXXXXXXXXXXQSYYGQSSPARAVPY 720
            T+EL++LG + G SP+RVALPPP++GA                   SYYG  SPA A P+
Sbjct: 344  TMELHLLGGQSGKSPSRVALPPPMYGATSVGASKPSRATSFQQPTSSYYGYGSPADAAPH 403

Query: 721  YDQTSSQ--AMAPPV-------------PNSTYDNQVCPICLTNPKDMAFGCGHQTCCEC 855
            + QTSS     A PV             P+STYDNQVCPICLTNPKDMAFGCGHQTCC+C
Sbjct: 404  FQQTSSSYYNSAHPVDTVPSAPSSPYIAPSSTYDNQVCPICLTNPKDMAFGCGHQTCCDC 463

Query: 856  GQTLDLCPICRSSIETRIKLY 918
            G+ L+ CPICRSSI+TRIKLY
Sbjct: 464  GRALENCPICRSSIQTRIKLY 484


>ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|222845815|gb|EEE83362.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  471 bits (1213), Expect = e-130
 Identities = 236/313 (75%), Positives = 259/313 (82%), Gaps = 7/313 (2%)
 Frame = +1

Query: 1   EDNLIPCYGFGDASTHDQDVFSFYPEERFCNGFEEVLSRYREIVPQLKLAGPTSFAPVIE 180
           EDNLIPC+GFGDASTHDQDVFSFYP+ERFCNGFEEVLSRYREIVP L+LAGPTSFAP+IE
Sbjct: 83  EDNLIPCFGFGDASTHDQDVFSFYPDERFCNGFEEVLSRYREIVPNLRLAGPTSFAPIIE 142

Query: 181 QAMTIVEQSGGQYHVLLIIADGQVTRSVDTEPGNLSPQEQRTVDAIVQASKLPLSIVLVG 360
            AMTIVEQS GQYHVLLIIADGQVTRSVDTE G LSPQEQ+TV+AIVQASKLPLSI+LVG
Sbjct: 143 MAMTIVEQSAGQYHVLLIIADGQVTRSVDTEHGQLSPQEQKTVEAIVQASKLPLSIILVG 202

Query: 361 VGDGPWDMMKEFDDNIPARDFDNFQFVNFTEIMSKNVPPIRKETEFALSALMEIPAQYKA 540
           VGDGPWDMM+EFDDNIPARDFDNFQFVNFTEIMSKNV   RKETEFALSALMEIP+QYKA
Sbjct: 203 VGDGPWDMMREFDDNIPARDFDNFQFVNFTEIMSKNVDTSRKETEFALSALMEIPSQYKA 262

Query: 541 TIELNILGSRKGISPNRVALPPPVHGAXXXXXXXXXXXXXXXXXXQSYYGQSSPAR---- 708
           TIEL+ILG  KGI   RVALPPP++GA                   + +  S P+R    
Sbjct: 263 TIELSILGQSKGIVSERVALPPPLYGA-------------------ASFSSSKPSRPASF 303

Query: 709 --AVPYYDQTSSQ-AMAPPVPNSTYDNQVCPICLTNPKDMAFGCGHQTCCECGQTLDLCP 879
             +VP Y + S   + APP   STYDNQ+CPICL+N KDMAFGCGHQTCCECG+TL LCP
Sbjct: 304 KPSVPSYQRDSQPFSSAPPATCSTYDNQLCPICLSNSKDMAFGCGHQTCCECGETLQLCP 363

Query: 880 ICRSSIETRIKLY 918
           ICRS+IETRIKL+
Sbjct: 364 ICRSTIETRIKLF 376


>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score =  471 bits (1211), Expect = e-130
 Identities = 236/307 (76%), Positives = 257/307 (83%), Gaps = 1/307 (0%)
 Frame = +1

Query: 1    EDNLIPCYGFGDASTHDQDVFSFYPEE-RFCNGFEEVLSRYREIVPQLKLAGPTSFAPVI 177
            +DNLIPC+GFGDASTHDQDVFSF+PEE RFCNGFEEVL+RY+EI P L+LAGPTSFAPVI
Sbjct: 145  DDNLIPCFGFGDASTHDQDVFSFFPEEERFCNGFEEVLNRYQEIAPHLRLAGPTSFAPVI 204

Query: 178  EQAMTIVEQSGGQYHVLLIIADGQVTRSVDTEPGNLSPQEQRTVDAIVQASKLPLSIVLV 357
            E AMTIVEQSGGQYHVLLIIADGQVTRSVDTE G LSPQEQ+TVDAIV+ASK PLSIVLV
Sbjct: 205  EMAMTIVEQSGGQYHVLLIIADGQVTRSVDTERGRLSPQEQKTVDAIVEASKFPLSIVLV 264

Query: 358  GVGDGPWDMMKEFDDNIPARDFDNFQFVNFTEIMSKNVPPIRKETEFALSALMEIPAQYK 537
            GVGDGPWDMM+EFDDNIP+R FDNFQFVNFTEIMSKN+P  RKETEFAL+ALMEIP+QYK
Sbjct: 265  GVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMSKNIPTSRKETEFALAALMEIPSQYK 324

Query: 538  ATIELNILGSRKGISPNRVALPPPVHGAXXXXXXXXXXXXXXXXXXQSYYGQSSPARAVP 717
            ATIEL+ILG RKG+SP RVALPPPV+GA                   S Y  S P+ +V 
Sbjct: 325  ATIELDILGGRKGVSPQRVALPPPVYGA--ASLNSSKSFSNSKPTWSSSYEPSVPSFSVN 382

Query: 718  YYDQTSSQAMAPPVPNSTYDNQVCPICLTNPKDMAFGCGHQTCCECGQTLDLCPICRSSI 897
                 +S   APPV +STYDNQVCPICLTNPKDMAFGCGHQTCCECGQ L  CPICRS+I
Sbjct: 383  RNPTPTS--TAPPVASSTYDNQVCPICLTNPKDMAFGCGHQTCCECGQDLQTCPICRSTI 440

Query: 898  ETRIKLY 918
             TRIKLY
Sbjct: 441  HTRIKLY 447


>ref|XP_003618769.1| E3 ubiquitin-protein ligase RGLG2 [Medicago truncatula]
            gi|355493784|gb|AES74987.1| E3 ubiquitin-protein ligase
            RGLG2 [Medicago truncatula]
          Length = 486

 Score =  461 bits (1187), Expect = e-127
 Identities = 223/310 (71%), Positives = 250/310 (80%), Gaps = 4/310 (1%)
 Frame = +1

Query: 1    EDNLIPCYGFGDASTHDQDVFSFYPEERFCNGFEEVLSRYREIVPQLKLAGPTSFAPVIE 180
            EDNLIPC+GFGDASTHDQDVFSFYP+ER CNGFEEVLSRYREIVP +KLAGPTSFAP++E
Sbjct: 177  EDNLIPCFGFGDASTHDQDVFSFYPDERICNGFEEVLSRYREIVPNIKLAGPTSFAPIVE 236

Query: 181  QAMTIVEQSGGQYHVLLIIADGQVTRSVDTEPGNLSPQEQRTVDAIVQASKLPLSIVLVG 360
             AMTIVEQSGGQYHVL+IIADGQVTRS+DTE G LSPQEQ+TVDAIV+ASK PLSI+LVG
Sbjct: 237  TAMTIVEQSGGQYHVLVIIADGQVTRSIDTEHGRLSPQEQKTVDAIVEASKFPLSIILVG 296

Query: 361  VGDGPWDMMKEFDDNIPARDFDNFQFVNFTEIMSKNVPPIRKETEFALSALMEIPAQYKA 540
            VGDGPWDMMKEFDDN+PAR FDNFQFVNFTE+MSKN+PP RKE  FAL+ALMEIP+QYKA
Sbjct: 297  VGDGPWDMMKEFDDNMPARAFDNFQFVNFTELMSKNIPPSRKEAAFALAALMEIPSQYKA 356

Query: 541  TIELNILGSRKGISPNRVALPPPVHGAXXXXXXXXXXXXXXXXXXQS----YYGQSSPAR 708
             IELN+LGSRK  +PNRVALP P +G+                   S     + +S+P+ 
Sbjct: 357  AIELNLLGSRKANAPNRVALPTPSYGSASFGTSKPYGSASFGPSKPSPHAASFERSAPSY 416

Query: 709  AVPYYDQTSSQAMAPPVPNSTYDNQVCPICLTNPKDMAFGCGHQTCCECGQTLDLCPICR 888
               Y D       AP  P+STY+NQ+CPICL+N KDMAFGCGHQTCCECGQ L  CPICR
Sbjct: 417  PPSYQDVVKQVGAAPSAPSSTYENQLCPICLSNEKDMAFGCGHQTCCECGQDLQTCPICR 476

Query: 889  SSIETRIKLY 918
            S I TRIKLY
Sbjct: 477  SPINTRIKLY 486


>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score =  461 bits (1185), Expect = e-127
 Identities = 233/313 (74%), Positives = 248/313 (79%), Gaps = 7/313 (2%)
 Frame = +1

Query: 1    EDNLIPCYGFGDASTHDQDVFSFYPEE-RFCNGFEEVLSRYREIVPQLKLAGPTSFAPVI 177
            +DNLIPCYGFGDASTHDQDVFSFYP+E R+CNGFEEVLSRYREIVP L+LAGPTSFAPVI
Sbjct: 161  DDNLIPCYGFGDASTHDQDVFSFYPDEGRYCNGFEEVLSRYREIVPNLRLAGPTSFAPVI 220

Query: 178  EQAMTIVEQSGGQYHVLLIIADGQVTRSVDTEPGNLSPQEQRTVDAIVQASKLPLSIVLV 357
            E AMTIVEQSGGQYHVLLIIADGQVTRSVDTE G LSPQEQ+TVDAIV ASK PLSIVLV
Sbjct: 221  EMAMTIVEQSGGQYHVLLIIADGQVTRSVDTERGRLSPQEQKTVDAIVAASKYPLSIVLV 280

Query: 358  GVGDGPWDMMKEFDDNIPARDFDNFQFVNFTEIMSKNVPPIRKETEFALSALMEIPAQYK 537
            GVGDGPWDMMKEFDDNIPARDFDNFQFVNFT IM+KN P  RKETEFALSALMEIP QYK
Sbjct: 281  GVGDGPWDMMKEFDDNIPARDFDNFQFVNFTNIMAKNAPQTRKETEFALSALMEIPLQYK 340

Query: 538  ATIELNILGSRKGISPNRVALPPPVHGAXXXXXXXXXXXXXXXXXXQ------SYYGQSS 699
            AT+ELN+LG R+G SP RVALPPP++ A                         SYYG S 
Sbjct: 341  ATLELNLLGRRRGTSPERVALPPPLYNARSLSNASSFNYTKPSPEKSFQSSTPSYYGNSR 400

Query: 700  PARAVPYYDQTSSQAMAPPVPNSTYDNQVCPICLTNPKDMAFGCGHQTCCECGQTLDLCP 879
             A   P    +SS    P    S YDN +CPICLTN KDMAFGCGHQTCCECGQ L  CP
Sbjct: 401  DASTTP-SAPSSSYDTGPTGATSAYDNLLCPICLTNNKDMAFGCGHQTCCECGQDLQTCP 459

Query: 880  ICRSSIETRIKLY 918
            ICRS+I+TRIKLY
Sbjct: 460  ICRSTIQTRIKLY 472


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