BLASTX nr result

ID: Atractylodes21_contig00016283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016283
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]   380   e-108
ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...   381   e-108
ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   375   e-107
ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago trun...   375   e-107
ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   376   e-107

>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score =  380 bits (976), Expect(2) = e-108
 Identities = 211/325 (64%), Positives = 244/325 (75%), Gaps = 47/325 (14%)
 Frame = -1

Query: 1185 QIIINYAMLLEDNKYFEDAFKVYERGVKMFKYPHVKDICITYLSKFVKRYGKSKLERARE 1006
            QIIINY++LLE++KYFEDAFKVYERGVK+FKYPHVKDI +TYLSKFVKRYGKSKLERARE
Sbjct: 549  QIIINYSLLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERARE 608

Query: 1005 LFEHAVEMAPAEVVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPPNEKLSMYEIYIAR 826
            LFEHAVEMAPAE VKPLY+QYAKLEED+GLAKRAM+VYDQA KAVP NEKLSMYEIYIAR
Sbjct: 609  LFEHAVEMAPAESVKPLYMQYAKLEEDFGLAKRAMKVYDQAAKAVPNNEKLSMYEIYIAR 668

Query: 825  AAEIFGVPKTREIYEQAIVSDGLPEKDAMKMCIKYAELEKSLGEIDRARKIYIYASGWW- 649
            A+EIFG+PKTREIYEQAI S G+P+KD   MC+KYAELEKSLGEIDRAR I++YAS    
Sbjct: 669  ASEIFGIPKTREIYEQAITS-GVPDKDVKTMCMKYAELEKSLGEIDRARGIFVYASQLAD 727

Query: 648  ILTDGDFWSKWHEFEVQHGNEDTFRDMLRIKRSVSARHSHS----------QKPSVD-EE 502
              +D DFW+KWHEFEVQHGNEDTFR+MLRIKRSVSA +S +          + P ++ +E
Sbjct: 728  PRSDADFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFLLPEYLMQKDPKLNLDE 787

Query: 501  GMDELKKAGALVPKD-------------------------------LGSETASGI---LN 424
             MD LK+AG  VP+D                               + S+   GI    N
Sbjct: 788  AMDTLKQAG--VPEDEMAALERQLVPTANNTAAKESSRKVGFVSAGVESQPDEGIKVTAN 845

Query: 423  QEEIELPEGSD-EEEDDGMAQKDVP 352
             E+IELPE SD E+E   +AQKD+P
Sbjct: 846  HEDIELPEESDSEDEKVEIAQKDIP 870



 Score = 40.0 bits (92), Expect(2) = e-108
 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 14/48 (29%)
 Frame = -2

Query: 290  AVFGGLVRKREE--------------EAENQNHSSRLGALQRIKRMRQ 189
            AVFGGLVRKREE               +++++  S+LGAL+RIKR RQ
Sbjct: 872  AVFGGLVRKREEADGDGDGDEDEDGAASKDKDRDSQLGALERIKRQRQ 919


>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  381 bits (978), Expect(2) = e-108
 Identities = 210/325 (64%), Positives = 245/325 (75%), Gaps = 47/325 (14%)
 Frame = -1

Query: 1185 QIIINYAMLLEDNKYFEDAFKVYERGVKMFKYPHVKDICITYLSKFVKRYGKSKLERARE 1006
            QIIINYA LLE++KYFEDAFKVYERGVK+FKYPHVKDI +TYLSKFVKRYGK+KLERARE
Sbjct: 547  QIIINYAWLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARE 606

Query: 1005 LFEHAVEMAPAEVVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPPNEKLSMYEIYIAR 826
            LFEHA+EMAPA+ VKPLYLQYAKLEEDYGLAKRAM+VYDQATKAVP NEKLSMYEIYIAR
Sbjct: 607  LFEHAIEMAPADSVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNEKLSMYEIYIAR 666

Query: 825  AAEIFGVPKTREIYEQAIVSDGLPEKDAMKMCIKYAELEKSLGEIDRARKIYIYASGWW- 649
            AAEIFGVPKTREIYEQAI S GLP+KD   MC+KYA+LEK+LGEIDRAR IY++AS +  
Sbjct: 667  AAEIFGVPKTREIYEQAIES-GLPDKDVKTMCLKYADLEKNLGEIDRARGIYVFASQFAD 725

Query: 648  ILTDGDFWSKWHEFEVQHGNEDTFRDMLRIKRSVSARHSHS------------QKPSVDE 505
              +D DFW++WHEFEVQHGNEDTFR+MLRIKRSVSA +S +            Q+ ++D 
Sbjct: 726  PRSDLDFWNQWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQRLNID- 784

Query: 504  EGMDELKKAG-----------------------------ALVPKDLGSETASGI---LNQ 421
            +  D+LK+AG                               V   + S++  G+    NQ
Sbjct: 785  DAKDKLKQAGLPEDEMAALERQLAPAINKTTARDSSRTVGFVSAGVQSQSDGGMQVTANQ 844

Query: 420  EEIELPEGSDEEEDD--GMAQKDVP 352
            E+IELPE SD E+D+   +AQKDVP
Sbjct: 845  EDIELPEESDSEDDEKVEIAQKDVP 869



 Score = 38.5 bits (88), Expect(2) = e-108
 Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
 Frame = -2

Query: 290 AVFGGLVRKREEEAEN--QNHSSRLGALQRIKRMRQ 189
           AVFGGL  KREE  ++  ++  SRLGAL+RIKR+++
Sbjct: 871 AVFGGLAGKREEPEKDDAKDGGSRLGALERIKRLKR 906


>ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 919

 Score =  375 bits (963), Expect(2) = e-107
 Identities = 210/325 (64%), Positives = 242/325 (74%), Gaps = 47/325 (14%)
 Frame = -1

Query: 1185 QIIINYAMLLEDNKYFEDAFKVYERGVKMFKYPHVKDICITYLSKFVKRYGKSKLERARE 1006
            QIIINYA  LE++KYFEDAFKVYERGVK+FKYPHVKDI +TYLSKFVKRYGK+KLERARE
Sbjct: 554  QIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKNKLERARE 613

Query: 1005 LFEHAVEMAPAEVVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPPNEKLSMYEIYIAR 826
            LFE+AVE APA+ VKPLYLQYAKLEEDYGLAKRAM+VYDQATKAVP NEKLSMYEIYIAR
Sbjct: 614  LFENAVESAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNEKLSMYEIYIAR 673

Query: 825  AAEIFGVPKTREIYEQAIVSDGLPEKDAMKMCIKYAELEKSLGEIDRARKIYIYASGWW- 649
            AAEIFGVPKTREIYEQAI S GLP+KD   MC+KYAELEKSLGEIDRAR I+++AS +  
Sbjct: 674  AAEIFGVPKTREIYEQAIES-GLPDKDVKTMCLKYAELEKSLGEIDRARGIFVFASQFAD 732

Query: 648  ILTDGDFWSKWHEFEVQHGNEDTFRDMLRIKRSVSARHSHS---------QKPSVD--EE 502
              +D +FW+KWHEFEVQHGNEDTFR+MLRIKRSVSA +S +         QK      +E
Sbjct: 733  PRSDPEFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQTVNLDE 792

Query: 501  GMDELKKAGALVPKD-----------------------------LGSETASGI---LNQE 418
              D+LK+AG  +P+D                             + S+   G+    N E
Sbjct: 793  AKDKLKQAG--IPEDEMAALERQLAPAVDNTVTKDRKVGFVSAGVESQLDRGVKTSANHE 850

Query: 417  EIELPEGSDEEEDDG---MAQKDVP 352
            +IELPE SD ++DD    +AQKDVP
Sbjct: 851  DIELPEESDSDDDDDKIEIAQKDVP 875



 Score = 40.4 bits (93), Expect(2) = e-107
 Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 8/42 (19%)
 Frame = -2

Query: 290  AVFGGLVRKREEE--------AENQNHSSRLGALQRIKRMRQ 189
            AVFGGL+RKR+E         A+++++  RLGAL+R+KR++Q
Sbjct: 877  AVFGGLIRKRDENENNGEVDAAKDKDNGIRLGALERMKRLKQ 918


>ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago truncatula]
            gi|355482496|gb|AES63699.1| Pre-mRNA-splicing factor SYF1
            [Medicago truncatula]
          Length = 925

 Score =  375 bits (962), Expect(2) = e-107
 Identities = 209/323 (64%), Positives = 242/323 (74%), Gaps = 45/323 (13%)
 Frame = -1

Query: 1185 QIIINYAMLLEDNKYFEDAFKVYERGVKMFKYPHVKDICITYLSKFVKRYGKSKLERARE 1006
            QIIINYA  LE++KYFEDAFKVYERGVK+FKYPHVKDI +TYLSKFVKRYG++KLERARE
Sbjct: 562  QIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGRTKLERARE 621

Query: 1005 LFEHAVEMAPAEVVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPPNEKLSMYEIYIAR 826
            LFE+AVE APA+ VKPLYLQYAKLEEDYGLAKRAM+VYDQATKAVP NEKLSMYEIYIAR
Sbjct: 622  LFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNEKLSMYEIYIAR 681

Query: 825  AAEIFGVPKTREIYEQAIVSDGLPEKDAMKMCIKYAELEKSLGEIDRARKIYIYASGWWI 646
            AAEIFGVPKTREIYEQAI S GLP+KD   MC+KYAELE+SLGEI+RAR +Y++AS +  
Sbjct: 682  AAEIFGVPKTREIYEQAIES-GLPDKDVKTMCLKYAELERSLGEIERARGVYVFASKFAD 740

Query: 645  -LTDGDFWSKWHEFEVQHGNEDTFRDMLRIKRSVSARHSHS---------QKPSVD--EE 502
              +D DFW+ WHEFEVQHGNEDTFR+MLRIKRSVSA +S +         QK      EE
Sbjct: 741  PRSDPDFWNDWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQTVNLEE 800

Query: 501  GMDELKKAGALVPKD-----------------------------LGSETASGI---LNQE 418
              D+LK+AG  +P+D                             + S++  GI    N E
Sbjct: 801  AKDKLKEAG--IPEDEMAALERQLAPAVDKAVTKERKVGFVSAGVESQSDGGIKTNANHE 858

Query: 417  EIELPEGSDEEEDD-GMAQKDVP 352
            EIELPE +D ++DD  +AQKDVP
Sbjct: 859  EIELPEENDSDDDDIEIAQKDVP 881



 Score = 40.4 bits (93), Expect(2) = e-107
 Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 8/42 (19%)
 Frame = -2

Query: 290  AVFGGLVRKREE--------EAENQNHSSRLGALQRIKRMRQ 189
            AVFGGLVRKR+E         A+ +++ SRLGAL+RIK++++
Sbjct: 883  AVFGGLVRKRDEIENNEVDDGAKEKDNESRLGALERIKKLKR 924


>ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 650

 Score =  376 bits (965), Expect(2) = e-107
 Identities = 213/323 (65%), Positives = 245/323 (75%), Gaps = 45/323 (13%)
 Frame = -1

Query: 1185 QIIINYAMLLEDNKYFEDAFKVYERGVKMFKYPHVKDICITYLSKFVKRYGKSKLERARE 1006
            QIIINYA+LLE++KYFEDAFKVYERGVK+FKYPHVKDI +TYLSKFVKRYGK+KLERARE
Sbjct: 286  QIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARE 345

Query: 1005 LFEHAVEMAPAEVVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPPNEKLSMYEIYIAR 826
            LFEHAVE APA+ V+PLYLQYAKLEED+GLAKRAM+VYDQATKAVP NEKLSMYEIYIAR
Sbjct: 346  LFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRAMKVYDQATKAVPNNEKLSMYEIYIAR 405

Query: 825  AAEIFGVPKTREIYEQAIVSDGLPEKDAMKMCIKYAELEKSLGEIDRARKIYIYASGWW- 649
            AAEIFGVPKTREIYEQAI S GLP++D   MC+KYAELEKSLGEIDRAR IY++AS +  
Sbjct: 406  AAEIFGVPKTREIYEQAIES-GLPDQDVKTMCLKYAELEKSLGEIDRARGIYVFASQFAD 464

Query: 648  ILTDGDFWSKWHEFEVQHGNEDTFRDMLRIKRSVSARHSHS---------QKPSVD--EE 502
              +D +FW+KWHEFEVQHGNEDTFR+MLRIKRSVSA +S +         QK      +E
Sbjct: 465  PRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQTMNLDE 524

Query: 501  GMDELKKAGA-----------LVP------KDLGSET----------ASGIL----NQEE 415
              D+LK+AG            L P      KD G +           A G L    +QE+
Sbjct: 525  AKDKLKQAGVTEDEMAALERQLAPAIEDTAKDNGRKVGFVSAGVESQADGELKVTAHQED 584

Query: 414  IELPEGSDEEEDDG--MAQKDVP 352
            IELP+ SD EED+   +AQK+VP
Sbjct: 585  IELPDESDSEEDENVEIAQKEVP 607



 Score = 39.3 bits (90), Expect(2) = e-107
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
 Frame = -2

Query: 290 AVFGGLVRKREEEAE---NQNHSSRLGALQRIKRMRQK*SF 177
           AVFGGL RK+E+  E    ++  S LGAL+RIKR ++  SF
Sbjct: 609 AVFGGLTRKKEDSDEVDGEKDDDSHLGALERIKRQKKHNSF 649


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