BLASTX nr result

ID: Atractylodes21_contig00016250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016250
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [S...   197   6e-49
tpg|DAA40943.1| TPA: putative RNA helicase family protein [Zea m...   197   8e-49
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   196   2e-48
dbj|BAJ33947.1| unnamed protein product [Thellungiella halophila]     194   6e-48
ref|NP_196805.2| pre-mRNA-splicing factor ATP-dependent RNA heli...   194   8e-48

>ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [Sorghum bicolor]
           gi|241926289|gb|EER99433.1| hypothetical protein
           SORBIDRAFT_02g034295 [Sorghum bicolor]
          Length = 1271

 Score =  197 bits (502), Expect = 6e-49
 Identities = 96/105 (91%), Positives = 102/105 (97%)
 Frame = -3

Query: 315 TGSGKTTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLGDLVGYAIRFE 136
           TGSGKTTQLTQYLHEDGYTT+G+VGCTQPRRVAAMSVAKRVSEEMETDLGD VGYAIRFE
Sbjct: 599 TGSGKTTQLTQYLHEDGYTTTGVVGCTQPRRVAAMSVAKRVSEEMETDLGDKVGYAIRFE 658

Query: 135 DMTGPKTVIKYMTEGVLLRETLKDPDLDKYRVIVMDEAHERSLST 1
           D+TGP T+IKYMT+GVLLRETLKD DLDKYRVIVMDEAHERSL+T
Sbjct: 659 DVTGPNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNT 703


>tpg|DAA40943.1| TPA: putative RNA helicase family protein [Zea mays]
          Length = 1450

 Score =  197 bits (501), Expect = 8e-49
 Identities = 95/105 (90%), Positives = 102/105 (97%)
 Frame = -3

Query: 315  TGSGKTTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLGDLVGYAIRFE 136
            TGSGKTTQLTQYLHEDGYTT+G+VGCTQPRRVAAMSVAKRVSEEMETDLGD VGYAIRFE
Sbjct: 778  TGSGKTTQLTQYLHEDGYTTTGVVGCTQPRRVAAMSVAKRVSEEMETDLGDKVGYAIRFE 837

Query: 135  DMTGPKTVIKYMTEGVLLRETLKDPDLDKYRVIVMDEAHERSLST 1
            D+TGP T+IKYMT+GVLLRETLKD DLDKYRV+VMDEAHERSL+T
Sbjct: 838  DVTGPNTIIKYMTDGVLLRETLKDADLDKYRVVVMDEAHERSLNT 882


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Glycine max]
          Length = 1270

 Score =  196 bits (497), Expect = 2e-48
 Identities = 96/105 (91%), Positives = 101/105 (96%)
 Frame = -3

Query: 315 TGSGKTTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLGDLVGYAIRFE 136
           TGSGKTTQLTQYLHEDGYT  GIVGCTQPRRVAAMSVAKRVSEEM+T+LGD VGYAIRFE
Sbjct: 597 TGSGKTTQLTQYLHEDGYTIGGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFE 656

Query: 135 DMTGPKTVIKYMTEGVLLRETLKDPDLDKYRVIVMDEAHERSLST 1
           D+TGPKT+IKYMT+GVLLRETLKD DLDKYRVIVMDEAHERSLST
Sbjct: 657 DVTGPKTIIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLST 701


>dbj|BAJ33947.1| unnamed protein product [Thellungiella halophila]
          Length = 1255

 Score =  194 bits (493), Expect = 6e-48
 Identities = 95/105 (90%), Positives = 101/105 (96%)
 Frame = -3

Query: 315 TGSGKTTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLGDLVGYAIRFE 136
           TGSGKTTQLTQYLHEDGYT +GIVGCTQPRRVAAMSVAKRVSEEMET+LGD VGYAIRFE
Sbjct: 583 TGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIRFE 642

Query: 135 DMTGPKTVIKYMTEGVLLRETLKDPDLDKYRVIVMDEAHERSLST 1
           D+TGP TVIKYMT+GVLLRETLKD DLDKYRV+VMDEAHERSL+T
Sbjct: 643 DVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNT 687


>ref|NP_196805.2| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
           [Arabidopsis thaliana] gi|332004458|gb|AED91841.1|
           pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Arabidopsis thaliana]
          Length = 1255

 Score =  194 bits (492), Expect = 8e-48
 Identities = 94/105 (89%), Positives = 101/105 (96%)
 Frame = -3

Query: 315 TGSGKTTQLTQYLHEDGYTTSGIVGCTQPRRVAAMSVAKRVSEEMETDLGDLVGYAIRFE 136
           TGSGKTTQLTQYLHEDGYT +GIVGCTQPRRVAAMSVAKRVSEEMET+LGD +GYAIRFE
Sbjct: 583 TGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFE 642

Query: 135 DMTGPKTVIKYMTEGVLLRETLKDPDLDKYRVIVMDEAHERSLST 1
           D+TGP TVIKYMT+GVLLRETLKD DLDKYRV+VMDEAHERSL+T
Sbjct: 643 DVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNT 687


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