BLASTX nr result

ID: Atractylodes21_contig00016202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016202
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...    88   8e-16
ref|XP_003525399.1| PREDICTED: tubulin beta-1 chain-like [Glycin...    87   1e-15
ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...    87   2e-15
ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi...    86   2e-15
gb|ABS50665.1| beta-tubulin [Eucalyptus grandis] gi|383081782|db...    86   2e-15

>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/42 (90%), Positives = 39/42 (92%)
 Frame = -1

Query: 128 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDATGRYVGDKHV 3
           MREILHIQAGQCGNQIGGKFWEVVCDEHGID TG YVG+ HV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHV 42


>ref|XP_003525399.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 446

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = -1

Query: 128 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDATGRYVGDKHV 3
           MREILH+QAGQCGNQIGGKFWEV+CDEHGIDATG YVG+ H+
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGNYVGNSHL 42


>ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 444

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -1

Query: 128 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDATGRYVGDKHV 3
           MREILHIQAGQCGNQIGGKFWEVVCDEHGID  G YVGD H+
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDTKGNYVGDSHL 42


>ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa]
           gi|222841924|gb|EEE79471.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -1

Query: 128 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDATGRYVGDKHV 3
           MREILHIQAGQCGNQIGGKFWEVVCDEHGID TG Y G+ HV
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYTGNSHV 42


>gb|ABS50665.1| beta-tubulin [Eucalyptus grandis] gi|383081782|dbj|BAM05543.1|
           beta-tubulin 1 [Eucalyptus pilularis]
          Length = 444

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -1

Query: 128 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDATGRYVGDKHV 3
           MREILH+QAGQCGNQIGGKFWEVVC+EHGIDA G Y GD HV
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVVCEEHGIDAAGNYTGDSHV 42


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