BLASTX nr result
ID: Atractylodes21_contig00016142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00016142
(972 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 191 4e-57
emb|CCH50976.1| T4.15 [Malus x robusta] 182 3e-51
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu... 199 1e-48
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 189 2e-47
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 187 8e-47
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 191 bits (485), Expect(2) = 4e-57
Identities = 90/162 (55%), Positives = 115/162 (70%), Gaps = 1/162 (0%)
Frame = -2
Query: 971 LWCNFSDTPFVVSCEVNIGGERVPQCDSFKYLGSVIQKDGEVDDDVTHRIKAGWLKWRAA 792
L C FSD EV + + +P+ +SF+YLG+VIQ G++DDDVTHR+ A W+KWR A
Sbjct: 477 LGCKFSDGLDETDVEVRLAAQVIPKKESFRYLGAVIQGSGDIDDDVTHRVGAAWMKWRLA 536
Query: 791 TGVLCDKKVPLKLKGKFYKVAIRPAMLYGSECWPLKK-HERKLEVAEMRMLRWVCGAKMR 615
+GVLCDKK+ KLKGKFY+V +RPA+LYG+ECWP+K H K+ VAEMRMLRW+
Sbjct: 537 SGVLCDKKISPKLKGKFYRVVVRPALLYGAECWPVKNAHVHKMHVAEMRMLRWM------ 590
Query: 614 MLRWTCGRTLLDRIPNEVFRTELRVAAITDKLREGRLRWFGH 489
CG T D+I NEV R ++ VA++ DKLRE RLRWFGH
Sbjct: 591 -----CGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGH 627
Score = 57.8 bits (138), Expect(2) = 4e-57
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -1
Query: 483 SPVRRVENVMVEGVRM-RSRLKKTWEEQLRGGMAMLDLTESMTSDRSSWTRKIRAEYV 313
+PVRR E ++VEG R R R KK WEE +R +AML +TE MT DR W +I+ E V
Sbjct: 635 APVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRIKVEDV 692
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 182 bits (461), Expect(2) = 3e-51
Identities = 86/160 (53%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
Frame = -2
Query: 965 CNFSDTPFVVSCEVNIGGERVPQCDSFKYLGSVIQKDGEVDDDVTHRIKAGWLKWRAATG 786
C FS V IG + +P+ D F+YLGS++QK+GE+D D+ HRI+AGW+KW++A+G
Sbjct: 771 CKFSANGGQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDGDLNHRIQAGWMKWKSASG 830
Query: 785 VLCDKKVPLKLKGKFYKVAIRPAMLYGSECWPLK-KHERKLEVAEMRMLRWVCGAKMRML 609
VLCD+++PLKLKGKFY+ AIRPAMLYG+ECW +K +H K+ VAEMRMLRW+
Sbjct: 831 VLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWM-------- 882
Query: 608 RWTCGRTLLDRIPNEVFRTELRVAAITDKLREGRLRWFGH 489
CG T D+I NE R ++ VA I K+RE +LRWFGH
Sbjct: 883 ---CGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGH 919
Score = 47.4 bits (111), Expect(2) = 3e-51
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = -1
Query: 483 SPVRRVE-NVMVEGVRMRSRLKKTWEEQLRGGMAMLDLTESMTSDRSSWTRKI 328
+P+RR + V+G R R R +KT EE LR + LDLT+ MT DR+ W KI
Sbjct: 927 APIRRCDYGTEVQGRRGRGRPRKTLEETLRKDLEYLDLTKDMTQDRAQWRSKI 979
>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
Length = 213
Score = 199 bits (505), Expect = 1e-48
Identities = 93/162 (57%), Positives = 117/162 (72%), Gaps = 1/162 (0%)
Frame = -2
Query: 971 LWCNFSDTPFVVSCEVNIGGERVPQCDSFKYLGSVIQKDGEVDDDVTHRIKAGWLKWRAA 792
L C FSD EV + + +P+ +SFKYLG+VIQ G++DDDVTHR+ A W+KWR A
Sbjct: 9 LGCKFSDVLDETDVEVRLAAQVIPKKESFKYLGAVIQGSGDIDDDVTHRVGAAWMKWRLA 68
Query: 791 TGVLCDKKVPLKLKGKFYKVAIRPAMLYGSECWPLKK-HERKLEVAEMRMLRWVCGAKMR 615
+GVLCDKK+PLKLKGKFY+V +RPA+LYG+ECWP+K H K+ VAEMRMLRW+
Sbjct: 69 SGVLCDKKIPLKLKGKFYRVVVRPALLYGAECWPVKNAHVHKMHVAEMRMLRWM------ 122
Query: 614 MLRWTCGRTLLDRIPNEVFRTELRVAAITDKLREGRLRWFGH 489
CG T D+I NEV R ++ VA++ DKLRE RLRWFGH
Sbjct: 123 -----CGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGH 159
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 189 bits (480), Expect(2) = 2e-47
Identities = 92/161 (57%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Frame = -2
Query: 965 CNFSDT-PFVVSCEVNIGGERVPQCDSFKYLGSVIQKDGEVDDDVTHRIKAGWLKWRAAT 789
C FS T P EV++ G+ VPQ D+F+YLGS++QKDG++D+DV HRIKAGW+KWR A+
Sbjct: 353 CGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQAS 412
Query: 788 GVLCDKKVPLKLKGKFYKVAIRPAMLYGSECWPLK-KHERKLEVAEMRMLRWVCGAKMRM 612
G+LCDK+VP KLKGKFY+ AIRPA+LYG+ECWP K +H ++L VAEMRMLRW+
Sbjct: 413 GILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWM------- 465
Query: 611 LRWTCGRTLLDRIPNEVFRTELRVAAITDKLREGRLRWFGH 489
CG T DR+ N+ R + VA I +KL + RLRWFGH
Sbjct: 466 ----CGHTRRDRVRNDDIRDRVGVAPIAEKLVQHRLRWFGH 502
Score = 26.9 bits (58), Expect(2) = 2e-47
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 441 RMRSRLKKTWEEQLRGGMAMLDLTESMTSDRSSW 340
R R R TWEE ++ + ++T+ + +R++W
Sbjct: 525 RGRGRPNLTWEESVKRDLKGWNITKELAMNRAAW 558
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 187 bits (475), Expect(2) = 8e-47
Identities = 91/161 (56%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Frame = -2
Query: 965 CNFSDT-PFVVSCEVNIGGERVPQCDSFKYLGSVIQKDGEVDDDVTHRIKAGWLKWRAAT 789
C FS T P EV++ G+ VPQ D+F+YLGS++QKDG++D+DV HRIKAGW+KWR A+
Sbjct: 93 CGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQAS 152
Query: 788 GVLCDKKVPLKLKGKFYKVAIRPAMLYGSECWPLK-KHERKLEVAEMRMLRWVCGAKMRM 612
G+LCDK+VP KLKGKFY+ AIRPA+LYG+ECWP K +H ++L VAEMRMLRW+
Sbjct: 153 GILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWM------- 205
Query: 611 LRWTCGRTLLDRIPNEVFRTELRVAAITDKLREGRLRWFGH 489
CG T D + N+ R + VA I +KL + RLRWFGH
Sbjct: 206 ----CGHTRRDHVRNDDIRDRVGVAPIAEKLVQHRLRWFGH 242
Score = 26.9 bits (58), Expect(2) = 8e-47
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 441 RMRSRLKKTWEEQLRGGMAMLDLTESMTSDRSSW 340
R R R TWEE ++ + ++T+ + +R++W
Sbjct: 265 RGRGRPNLTWEESVKRDLKGWNITKELAMNRTAW 298