BLASTX nr result

ID: Atractylodes21_contig00016140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016140
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH...   353   5e-95
emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]   353   5e-95
ref|XP_003596761.1| hypothetical protein MTR_2g085340 [Medicago ...   352   1e-94
gb|ACJ85521.1| unknown [Medicago truncatula]                          351   2e-94
ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabi...   351   2e-94

>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
            gi|302142996|emb|CBI20291.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  353 bits (905), Expect = 5e-95
 Identities = 177/237 (74%), Positives = 203/237 (85%)
 Frame = -3

Query: 1100 EMAKRASLRREVLHTDFLTPLVLKESMMILEKLADVKTLVQGGYPEAERRRLSVGHPEAL 921
            EMAKRAS RREVLHTDFLTP VLKESM++LEKLAD+K + QGGYP+AER RLSVGH E L
Sbjct: 85   EMAKRASARREVLHTDFLTPPVLKESMIVLEKLADMKAVAQGGYPQAERCRLSVGHSEVL 144

Query: 920  TTEPDVVAALSISGNFGFQPCSHGDFLGAILGTGIVRDKLGDILLQGEKGAHVLVVPELV 741
            TT PD+VAAL I+GNFGFQ CSHGDFLGAILGTGI R+KLGDI+LQGEKGA VL+VPELV
Sbjct: 145  TTAPDIVAALRITGNFGFQSCSHGDFLGAILGTGIAREKLGDIILQGEKGAQVLIVPELV 204

Query: 740  DFLTMSLDKVGNVPVTCKKMPLIALEYEPPRTKTFKTVEASMRIDAIASAGFKISRSKLV 561
            DFL  SL+KVGNV V+C KMPL+ALEYE PRT TFKT+E S+R+DA+ASAGFK+SRSKLV
Sbjct: 205  DFLVSSLEKVGNVSVSCTKMPLLALEYEEPRTTTFKTIELSLRVDALASAGFKLSRSKLV 264

Query: 560  GLISDGDXXXXXXXXXXXXXTIKSGDMISVSGKGRLKIGEVNETKRGKFAVELIRFL 390
             LIS+GD             T+K+GD++SVSGKGRLKIGE+N TK+GK+AVELIRFL
Sbjct: 265  DLISNGDVRVNWTTVTKNGTTLKTGDVVSVSGKGRLKIGEINSTKKGKYAVELIRFL 321


>emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
          Length = 269

 Score =  353 bits (905), Expect = 5e-95
 Identities = 177/237 (74%), Positives = 203/237 (85%)
 Frame = -3

Query: 1100 EMAKRASLRREVLHTDFLTPLVLKESMMILEKLADVKTLVQGGYPEAERRRLSVGHPEAL 921
            EMAKRAS RREVLHTDFLTP VLKESM++LEKLAD+K + QGGYP+AER RLSVGH E L
Sbjct: 33   EMAKRASARREVLHTDFLTPPVLKESMIVLEKLADMKAVAQGGYPQAERCRLSVGHSEVL 92

Query: 920  TTEPDVVAALSISGNFGFQPCSHGDFLGAILGTGIVRDKLGDILLQGEKGAHVLVVPELV 741
            TT PD+VAAL I+GNFGFQ CSHGDFLGAILGTGI R+KLGDI+LQGEKGA VL+VPELV
Sbjct: 93   TTAPDIVAALRITGNFGFQSCSHGDFLGAILGTGIAREKLGDIILQGEKGAQVLIVPELV 152

Query: 740  DFLTMSLDKVGNVPVTCKKMPLIALEYEPPRTKTFKTVEASMRIDAIASAGFKISRSKLV 561
            DFL  SL+KVGNV V+C KMPL+ALEYE PRT TFKT+E S+R+DA+ASAGFK+SRSKLV
Sbjct: 153  DFLVSSLEKVGNVSVSCTKMPLLALEYEEPRTTTFKTIELSLRVDALASAGFKLSRSKLV 212

Query: 560  GLISDGDXXXXXXXXXXXXXTIKSGDMISVSGKGRLKIGEVNETKRGKFAVELIRFL 390
             LIS+GD             T+K+GD++SVSGKGRLKIGE+N TK+GK+AVELIRFL
Sbjct: 213  DLISNGDVRVNWTTVTKNGTTLKTGDVVSVSGKGRLKIGEINSTKKGKYAVELIRFL 269


>ref|XP_003596761.1| hypothetical protein MTR_2g085340 [Medicago truncatula]
            gi|355485809|gb|AES67012.1| hypothetical protein
            MTR_2g085340 [Medicago truncatula]
          Length = 325

 Score =  352 bits (902), Expect = 1e-94
 Identities = 170/237 (71%), Positives = 209/237 (88%)
 Frame = -3

Query: 1100 EMAKRASLRREVLHTDFLTPLVLKESMMILEKLADVKTLVQGGYPEAERRRLSVGHPEAL 921
            EMA+RASL+RE+LHT+FLTP VLKESM +LEKLAD+K L QGGYP+AER R+SVGHP+ L
Sbjct: 89   EMARRASLKREILHTNFLTPPVLKESMQVLEKLADIKALAQGGYPQAERCRISVGHPDEL 148

Query: 920  TTEPDVVAALSISGNFGFQPCSHGDFLGAILGTGIVRDKLGDILLQGEKGAHVLVVPELV 741
            T++PDV++ALSI+GNF F+PCSHGDFLG+ILGTGI R+K+GDI+LQGE+GA ++VVPELV
Sbjct: 149  TSDPDVISALSITGNFQFEPCSHGDFLGSILGTGIAREKVGDIILQGEQGAQIIVVPELV 208

Query: 740  DFLTMSLDKVGNVPVTCKKMPLIALEYEPPRTKTFKTVEASMRIDAIASAGFKISRSKLV 561
            +FLT +LDKV NVPVTC K+PLI+L+YEPPRTK+FKT+EAS+R+DA+ASAGFKISRSKLV
Sbjct: 209  EFLTSALDKVRNVPVTCTKIPLISLDYEPPRTKSFKTIEASLRVDAVASAGFKISRSKLV 268

Query: 560  GLISDGDXXXXXXXXXXXXXTIKSGDMISVSGKGRLKIGEVNETKRGKFAVELIRFL 390
             +IS+GD             T+KSGD++SVSG GRLKIGEVN TK+GKFAVELIR+L
Sbjct: 269  DMISNGDVRINWIPITTKGTTVKSGDLVSVSGLGRLKIGEVNTTKKGKFAVELIRYL 325


>gb|ACJ85521.1| unknown [Medicago truncatula]
          Length = 325

 Score =  351 bits (901), Expect = 2e-94
 Identities = 170/237 (71%), Positives = 209/237 (88%)
 Frame = -3

Query: 1100 EMAKRASLRREVLHTDFLTPLVLKESMMILEKLADVKTLVQGGYPEAERRRLSVGHPEAL 921
            EMA+RASL+RE+LHT+FLTP VLKESM +LEKLAD+K L QGGYP+AER R+SVGHP+ L
Sbjct: 89   EMARRASLKREILHTNFLTPPVLKESMRVLEKLADIKALAQGGYPQAERCRISVGHPDEL 148

Query: 920  TTEPDVVAALSISGNFGFQPCSHGDFLGAILGTGIVRDKLGDILLQGEKGAHVLVVPELV 741
            T++PDV++ALSI+GNF F+PCSHGDFLG+ILGTGI R+K+GDI+LQGE+GA ++VVPELV
Sbjct: 149  TSDPDVISALSITGNFQFEPCSHGDFLGSILGTGIAREKVGDIILQGEQGAQIIVVPELV 208

Query: 740  DFLTMSLDKVGNVPVTCKKMPLIALEYEPPRTKTFKTVEASMRIDAIASAGFKISRSKLV 561
            +FLT +LDKV NVPVTC K+PLI+L+YEPPRTK+FKT+EAS+R+DA+ASAGFKISRSKLV
Sbjct: 209  EFLTSALDKVRNVPVTCTKIPLISLDYEPPRTKSFKTIEASLRVDAVASAGFKISRSKLV 268

Query: 560  GLISDGDXXXXXXXXXXXXXTIKSGDMISVSGKGRLKIGEVNETKRGKFAVELIRFL 390
             +IS+GD             T+KSGD++SVSG GRLKIGEVN TK+GKFAVELIR+L
Sbjct: 269  DMISNGDVRINWIPITTKGTTVKSGDLVSVSGLGRLKIGEVNTTKKGKFAVELIRYL 325


>ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabidopsis thaliana]
            gi|16648939|gb|AAL24321.1| Unknown protein [Arabidopsis
            thaliana] gi|24899783|gb|AAN65106.1| Unknown protein
            [Arabidopsis thaliana] gi|27311617|gb|AAO00774.1| Unknown
            protein [Arabidopsis thaliana] gi|30984534|gb|AAP42730.1|
            At1g53120 [Arabidopsis thaliana]
            gi|332194772|gb|AEE32893.1| RNA-binding S4
            domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score =  351 bits (900), Expect = 2e-94
 Identities = 172/237 (72%), Positives = 204/237 (86%)
 Frame = -3

Query: 1100 EMAKRASLRREVLHTDFLTPLVLKESMMILEKLADVKTLVQGGYPEAERRRLSVGHPEAL 921
            EMA+RAS +REVLHTDFLTP ++KES+ +LEK ADVK + QGGYPEAER R+S+GHP+ L
Sbjct: 84   EMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVAQGGYPEAERCRISIGHPDVL 143

Query: 920  TTEPDVVAALSISGNFGFQPCSHGDFLGAILGTGIVRDKLGDILLQGEKGAHVLVVPELV 741
            T++PD+VAALSI+GNFGFQPCSHGDFLGAILGTGI R+KLGDIL+Q EKGA VL+VPELV
Sbjct: 144  TSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDILIQEEKGAQVLIVPELV 203

Query: 740  DFLTMSLDKVGNVPVTCKKMPLIALEYEPPRTKTFKTVEASMRIDAIASAGFKISRSKLV 561
            DF+  +LDKVGNV VTC K+PL+ALEYEPPRT +FKTVEAS+RIDA+ASAGFKISRSKLV
Sbjct: 204  DFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLV 263

Query: 560  GLISDGDXXXXXXXXXXXXXTIKSGDMISVSGKGRLKIGEVNETKRGKFAVELIRFL 390
             LIS  D              +K+GD++SVSGKGRLKIGE+NETK+GKFAVE+IR+L
Sbjct: 264  DLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIRYL 320


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