BLASTX nr result

ID: Atractylodes21_contig00016080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00016080
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   186   2e-45
gb|ABD78322.1| polyprotein [Primula vulgaris]                         184   7e-45
gb|AAM51834.1|AC105730_8 Putative plant disease resistance polyp...   184   7e-45
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]   182   3e-44
ref|XP_002443120.1| hypothetical protein SORBIDRAFT_08g009530 [S...   181   6e-44

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  186 bits (472), Expect = 2e-45
 Identities = 97/200 (48%), Positives = 132/200 (66%), Gaps = 7/200 (3%)
 Frame = -2

Query: 580 MRFQYNGSEVVLQGLTKGQDSTVPLQCLLSTVCETPRVPVDSLFLDNTSQ-------LSD 422
           M F +N   V ++G+     +   LQ   S +C++ R        ++  +       L+ 
Sbjct: 285 MSFWHNKKWVTVKGMDTQGGAIATLQ---SIICKSRRRSTGWWTYEDKCKEDGSIHTLAS 341

Query: 421 TQLQDLHTIFSQRMQVFQEPCGLPPNRIHDHTISLIPSHPPVCVRPYRYPHIQKTEIERQ 242
            Q ++L  +      VFQEP GLPP R  +H I+L      V VRPYRYPH  K EIE+Q
Sbjct: 342 EQSRELELLLENYGGVFQEPTGLPPKRKKEHVITLKEGEGAVNVRPYRYPHHHKNEIEKQ 401

Query: 241 VSELLRGGLIRPSRSSFSSPVILVRKKDQTWRMCVDYRALNKATIPDKYPIPVVDELIDE 62
           V E+L+ G+IR S SSFSSPVILV++KD +WRMC+DYRALNKAT+PDK+PIPV++EL+DE
Sbjct: 402 VREMLQAGIIRHSTSSFSSPVILVKEKDNSWRMCIDYRALNKATVPDKFPIPVIEELLDE 461

Query: 61  LSGSQFFSKLDLKSGYNQIR 2
           L G++F+SKLDLKSGY+Q+R
Sbjct: 462 LHGARFYSKLDLKSGYHQVR 481


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score =  184 bits (468), Expect = 7e-45
 Identities = 100/195 (51%), Positives = 128/195 (65%), Gaps = 2/195 (1%)
 Frame = -2

Query: 580 MRFQYNGSEVVLQGLTKGQDSTVPLQCLLSTVCETPR--VPVDSLFLDNTSQLSDTQLQD 407
           M F +   +V L+GL         +Q L   + +     + + S  + N S L D+++  
Sbjct: 397 MTFTHGNKKVCLKGLNN-DTKIAEIQFLEGKMVKEQGFILQLYSTNVQNDSSLEDSKISP 455

Query: 406 LHTIFSQRMQVFQEPCGLPPNRIHDHTISLIPSHPPVCVRPYRYPHIQKTEIERQVSELL 227
           L   F +   VF EP GLPP R H H I LI    P+ VRPYRYP+ QK EIE+ V EL+
Sbjct: 456 LLRGFPE---VFSEPKGLPPEREHVHKIELIQGTNPISVRPYRYPYFQKNEIEKIVKELI 512

Query: 226 RGGLIRPSRSSFSSPVILVRKKDQTWRMCVDYRALNKATIPDKYPIPVVDELIDELSGSQ 47
             G IRPS+S FSSPVILV+K D +WRMCVDYRALNK TI DK+PIPVVDEL+DEL+G++
Sbjct: 513 ESGFIRPSQSPFSSPVILVKKSDGSWRMCVDYRALNKVTIKDKFPIPVVDELLDELNGAK 572

Query: 46  FFSKLDLKSGYNQIR 2
            FSKLDL+SGY+QI+
Sbjct: 573 LFSKLDLRSGYHQIK 587


>gb|AAM51834.1|AC105730_8 Putative plant disease resistance polyprotein [Oryza sativa
           Japonica Group] gi|108706267|gb|ABF94062.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 624

 Score =  184 bits (468), Expect = 7e-45
 Identities = 99/202 (49%), Positives = 131/202 (64%), Gaps = 9/202 (4%)
 Frame = -2

Query: 580 MRFQYNGSEVVLQGLTKGQDSTVPLQCLLSTV---------CETPRVPVDSLFLDNTSQL 428
           ++FQY GS + LQG+   QD+ VP +    T+         CE     +     D+   +
Sbjct: 305 LKFQYQGSWISLQGV---QDAAVPSEIAAVTLPQLLKWHKGCEIWAAALLEHSQDDVQHV 361

Query: 427 SDTQLQDLHTIFSQRMQVFQEPCGLPPNRIHDHTISLIPSHPPVCVRPYRYPHIQKTEIE 248
             + +Q L T F     VF +P  LPP+R+ DH ISL+P   PV  RPYRY  +QK EIE
Sbjct: 362 IPSSVQQLLTDFDD---VFHDPKCLPPHRVFDHAISLVPDATPVNYRPYRYSPLQKDEIE 418

Query: 247 RQVSELLRGGLIRPSRSSFSSPVILVRKKDQTWRMCVDYRALNKATIPDKYPIPVVDELI 68
           +QV E++  GLI PS S ++SPV+LV+KKD +WR CVDYR LN  TI  K+P+PVVDEL+
Sbjct: 419 KQVKEMIDAGLITPSMSPYASPVLLVKKKDGSWRFCVDYRRLNALTIKSKFPMPVVDELL 478

Query: 67  DELSGSQFFSKLDLKSGYNQIR 2
           DELSG++FFSKLDLK+GY+QIR
Sbjct: 479 DELSGTKFFSKLDLKAGYHQIR 500


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score =  182 bits (463), Expect = 3e-44
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = -2

Query: 376 VFQEPCGLPPNRIHDHTISLIPSHPPVCVRPYRYPHIQKTEIERQVSELLRGGLIRPSRS 197
           VF+ P  LPP R HDH I L PS  PV VRPYRYP+ QKTEIE+ V ELL+ GLIRPS S
Sbjct: 537 VFESPTTLPPRRSHDHKIPLQPSAGPVSVRPYRYPYYQKTEIEKMVKELLQSGLIRPSNS 596

Query: 196 SFSSPVILVRKKDQTWRMCVDYRALNKATIPDKYPIPVVDELIDELSGSQFFSKLDLKSG 17
            FSSP++LV+K D  WR CVDYRALN  TI DKYPIPV+DEL+DEL G++F+SKLDL+SG
Sbjct: 597 PFSSPILLVKKADGAWRFCVDYRALNDITIKDKYPIPVIDELLDELHGAKFYSKLDLRSG 656

Query: 16  YNQIR 2
           Y+QIR
Sbjct: 657 YHQIR 661


>ref|XP_002443120.1| hypothetical protein SORBIDRAFT_08g009530 [Sorghum bicolor]
            gi|241943813|gb|EES16958.1| hypothetical protein
            SORBIDRAFT_08g009530 [Sorghum bicolor]
          Length = 1574

 Score =  181 bits (460), Expect = 6e-44
 Identities = 84/142 (59%), Positives = 107/142 (75%)
 Frame = -2

Query: 427  SDTQLQDLHTIFSQRMQVFQEPCGLPPNRIHDHTISLIPSHPPVCVRPYRYPHIQKTEIE 248
            +D Q   L  +  Q   +F+EP GLPP R +DH I L+P  PPV VRPYRYP +QK E+E
Sbjct: 681  TDIQQPLLDRLLHQHAAIFEEPQGLPPARPYDHRIHLLPGTPPVAVRPYRYPQLQKDELE 740

Query: 247  RQVSELLRGGLIRPSRSSFSSPVILVRKKDQTWRMCVDYRALNKATIPDKYPIPVVDELI 68
            RQ   +L  G+IRPS S FS+PV+LVRK D++WR C+DYRALN  T  DK+PIPVVDEL+
Sbjct: 741  RQCEAMLTQGIIRPSTSPFSAPVLLVRKADKSWRFCIDYRALNAKTSKDKFPIPVVDELL 800

Query: 67   DELSGSQFFSKLDLKSGYNQIR 2
            DEL G++FF+KLDL+SGY+Q+R
Sbjct: 801  DELHGARFFTKLDLRSGYHQVR 822


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